Leucoraja erinaceus (little skate): 129707940
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Entry
129707940 CDS
T09122
Symbol
taf3
Name
(RefSeq) transcription initiation factor TFIID subunit 3
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129707940 (taf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leri03021
]
129707940 (taf3)
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129707940 (taf3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromo_TP
PHD
PHD_UBR7-like
PHD_Pygo
PHD_2
Motif
Other DBs
NCBI-GeneID:
129707940
NCBI-ProteinID:
XP_055509407
LinkDB
All DBs
Position
22:complement(34287557..34462879)
Genome browser
AA seq
916 aa
AA seq
DB search
MCEGYGRALLRVAVAQICQALGWDSVQLTACDILTDVLSRYMERLGRGCHRHTELYGRTD
PVLDDLGQAFKLMGISLSELEDYIHNLEPIGFAHQIPAFPVSKNNVLQFPQPGAKRLGEE
KEYIPEYLPPLISSQEEEEEEQVPTDGGTSAEAMQVPLEEEEDEMEEEEAVNDENFLGKR
PLESPDSADLPVAKRARIAGCKIDSPDGVLEPREPLSMINSQRVPPVLSPVPPPDHSDSL
PLSPEPPMLAPIPKPSPLSTPKSSDSKAFTSKVKSKISSSSIQKPKSPKAVQLALLGSPI
RSPKASLKADKKSPMRTKSPKSPKSPKVPPSVSHSAAKSETPSRTPLSVCNSGPEKLGKE
NVQTRQSLLSIEVEKPNVSDTSPKKLPVPDKSIDDSIDAVIARACAEREPDPFEFSSGSE
SEGEIFTSPRRLTISESSTPRMFSLSSSFSRGSATPVSSSAPTTSTNVSWTLDDSINEVV
RKASMGTPPSVPVSIPYLSSPSASPPTPEPLLKLYEERTKHTSTSDVKKKLKKEIKMKIR
KKEKEKLKDKDKEKKEKSKDKEKNKEASKESKILKELAKDHELDPFKFRIKDFDSDIKAK
HKDGNFKKDKEKHKEKKKDKEKSKKDKEKNKDKDKHKVKNQLTPLPFVIKEPLFSTPSNV
RSPSVLPAVPLLVPERLFEEKPKEKEKKKDKKEKKKKKEKERMKEKEKREREKKEKEKEK
EKHKHEKAKPEPIIPAPSPVIPRLTLRVGAGQDKIVISKVVPVTEAKPSPPTAHPKTPPP
PSPAPAPIHIAAALTPVPLPLSTAVPSPAPALPAASPAATCSASGTSKTPVRSVVTETVS
TYVIRDEWGNQIWICPGCNKADDGSPMIGCDDCDDWYHWPCVGISAAPPDEVQWFCPKCI
NKKKEKKHKRKKSRAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagggctacgggcgggcgttgctgcgggtggcggtggcgcagatctgccaggcg
ctgggctgggactcggtgcagctgacggcctgcgacatcctcaccgacgtgttgagccga
tacatggagcggctgggccgcggctgccaccgccacaccgagctctatggtcgtacggat
cccgtcttggatgatttaggtcaggcctttaaactaatgggaatcagcctttcagagctg
gaagactatattcacaaccttgagcccatcgggtttgcacatcaaatcccagctttccct
gtcagcaaaaacaacgtgctccagttcccacagcctggagccaagagacttggtgaggag
aaggagtatattccagaatacctgccacctctcatctcgtcacaagaagaggaagaagag
gagcaggtgccgactgatggaggcacgtcagcagaagccatgcaagtccctctcgaagag
gaagaggatgaaatggaggaggaagaggctgttaacgatgagaactttttgggaaaaaga
ccgttagaaagcccagactctgccgatttaccggttgcaaagcgagccagaatagcgggg
tgtaaaatagacagccccgacggtgttttggaacccagggaacctttaagtatgataaat
tctcaaagggtgccccctgttttgtcaccggtccctccgccagatcattcagactcactg
ccactttcccccgaacctcccatgcttgcacccataccaaaaccgtcgccactttccacc
cccaaatcctccgactcaaaagcattcacgtctaaagtcaaatcgaagatctcatcgtcg
tcgatacaaaagcccaaatccccaaaagcagttcagttggcactcttgggaagtcccatc
cgatctccgaaagcttctttgaaagcggacaaaaaatcgcccatgcgcacaaaaagtccc
aaaagcccgaaaagtcccaaagtaccacccagtgtttctcattccgcggccaagagtgaa
actcccagcaggacgcccttgtctgtttgcaactctgggcctgagaaactgggcaaagaa
aacgttcagaccaggcagtcgctcttgtcgattgaagtggagaaaccgaatgtttccgac
acctcgccaaaaaaattgccagtgcctgataagagtattgatgactcgatcgacgccgtc
atcgcccgcgcttgcgctgagcgggaacccgacccctttgagttctcctcaggttccgaa
tcggaaggggagattttcaccagccccaggagacttaccatttcagaatcgtccacccca
cgaatgttctccctgtcgagcagcttcagcagaggaagtgccacccccgtgtcctcgtcg
gccccgacaaccagcaccaatgtatcgtggacgttggacgattccatcaacgaggttgtt
cggaaggccagcatgggaacgccgccctccgtccccgtgtccatcccttacctgtcctcc
ccgtccgcttccccccctaccccggagcccctcctcaaactctacgaggagcgcacaaag
cacacgtcgacgtccgacgtgaagaaaaagctgaagaaagaaattaagatgaagatcagg
aagaaggagaaggagaagttgaaggataaggacaaggagaaaaaggaaaagagcaaagac
aaagagaaaaacaaggaggccagcaaggagtccaagattttgaaagagctcgcaaaagac
cacgagctagatccgttcaaatttagaatcaaagatttcgatagcgacattaaggcaaaa
cacaaggatgggaacttcaaaaaggacaaggaaaagcacaaggaaaagaagaaagataaa
gaaaagagtaaaaaggacaaggagaagaataaggacaaggataaacacaaagttaagaac
cagttgacgccgctcccgtttgttataaaggagcccttgttcagcaccccgagcaacgtt
cgaagcccgtccgtgctgcccgcagtgcccctcctggtccccgagagactgtttgaagag
aagcccaaagagaaggaaaagaaaaaggacaaaaaggagaagaagaaaaagaaggagaag
gagaggatgaaggaaaaggagaaaagagagagggaaaagaaggagaaggagaaagagaaa
gagaagcataaacacgaaaaggcaaaaccggaaccaattataccagctccctcccctgtt
attccaagacttaccctgagagtgggtgctggccaggataaaatagtcatcagcaaagtg
gtcccagtgacagaggccaagccgtcgcctccaacggcccacccaaagaccccaccacct
ccgtcgccagcacctgcgcccatccacatcgccgcggctctcactcccgtccccctcccc
ctgtccacggctgtcccctccccagcgcccgccctccccgcggcctcccccgctgccact
tgctccgcatcaggaacgtccaagactccggtcaggagcgtggtgactgaaaccgtcagc
acttatgtgattcgcgatgagtgggggaatcagatctggatttgtcctggttgtaacaag
gctgatgacggcagcccgatgatcggttgtgacgactgtgatgactggtaccactggccc
tgcgttggaatctcggcggcccctccagacgaggtacagtggttctgccccaagtgcatc
aacaagaagaaggagaaaaaacataagcgaaagaagtctcgagctcactaa
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