Leucoraja erinaceus (little skate): 129708077
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Entry
129708077 CDS
T09122
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43-like
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
leri01002
]
129708077
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129708077
Enzymes [BR:
leri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129708077
Peptidases and inhibitors [BR:
leri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129708077
Ubiquitin system [BR:
leri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129708077
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
129708077
NCBI-ProteinID:
XP_055509582
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All DBs
Position
23:269906..555428
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AA seq
1220 aa
AA seq
DB search
MDESSRQPKASKPSLKAKVPRAKRRRTLSGRLFGRRSLRSVGSFMRGVFKTLFTLAPFGE
AAPAEGGGGRGGGGGGREEEDDGGFREGAVTLATCSEGQQEAGASKPGRDRVSWCQGEKP
PGVLGLKNHGNTCFMNAVVQCLSNTELFAEYLGLEQYRSELRQLRPSCTVGSAEVTDQLA
VLVRALWTLEYTPQISVQFKNIVAKYGSQFRGNSQHDALEFLLWLLNRVHEDLNCSPNKK
AKPSVKSPVDENSTRGSQQPGIQSFVQELFQAQYRSSLTCPHCLRQSNTFDPFLCISLPI
PLRQTRALNVILVFHSKNQRYLRIGLAVPLLGNVAALRKMVADEGKVTPDQVILTEIYTN
GFERSFSDEEDLNTIGEGDNVYAFQAPFVRGPAQHSGGFQNSSVPPSKSASNSFEGNPTD
FNQHGATGQVLLLICNTAGPSQQAVRFGPPFLLREDHSLTWDQLHHCILNKMCYLMKNET
HPQNFGHSFRIRVVGGLASNCFLSSQELRPLHQPAADRALRSCGAGGPPHIKLVLEWDQR
MKDSLFGSIQEEVIQDAESVRIQQQAHQQAHGCTLAECFDLYTKEEQLAPDDAWRCPHCK
NLQQGMVKLNLWTLPDILIIHLKRFRQVGERRTKLSTLVTFPPIGIDMAPHVVKRNQSGR
NFLSHWSPWRRPRTPSGSKDENFVYDLYAVCNHHGGMQGGHYTAFCRNSVDGQWYGYDDS
NVEFIPEQEICTRGAYILFYQKRNTIPPWSANSSVSGSTSSSISDHWLNRLTGDNKRGSL
VSRGSTNCTSLPSSPDSPVFPDNPIKDKNGGFEIRPFVRGIQGRSISMKGSPAASVPKDA
TVKNTPLRWSLGSKDRPKSMPGALVEYLESGRRPRCTKKSIVPIMTGSTDLDSTPTADGP
TDCNADSAKQTGKGLNVDHCPTPAANRDGKTLSEQTTVSSNNLQRSCSKENSIDEKTSTL
KRDSKQRGTGTLQRKSSKIPVDKSEGSKGAPLVKTEEPLQPRDNRISKSISGYSIGSLSS
LALSDTLKRRKGHHGIEKMEKSPSQRSTDLELISSSIPQEAEKDRNTEEAKLIDRKFSFL
KTNFLKKDSKRPREFEKCRTVENIGVSSRISLSNGALNGKHRADSINESRAKVEVNGAKN
SVKHREELNNGRISLSGEEIRRSQSSSNIVVKDDLTLKRSTSLQKNGPVSQQARRYGTMQ
RMRYSTSSLGRKKPVPESSF
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatcctctcgccagcccaaggcgtccaagcccagcctgaaggcgaaggtaccc
cgggccaagcggaggagaacgctgtcgggaaggctgttcgggaggaggtcgctgaggtcg
gtcggcagcttcatgaggggggtcttcaaaactttgttcactttggcacctttcggagag
gcggcgccggccgagggtggaggtgggcgaggaggaggaggaggaggaagagaggaagaa
gatgatggaggattcagggaaggagctgtcaccctggccacttgcagcgaagggcaacaa
gaagcaggggctagtaagcccgggagggaccgagtgtcctggtgtcagggcgagaagccg
cccggggttctgggcttgaaaaaccacggcaacacctgcttcatgaacgccgtggtgcag
tgcctgagcaacaccgaactgttcgccgagtacctgggtttggagcagtaccgctctgag
ctgaggcagcttcgacccagctgcaccgtgggcagcgccgaggtgacggatcaactggcc
gtgttggtcagggcgctatggaccctggagtacacgcctcaaatctccgtgcagttcaag
aatattgttgcaaaatatggatctcaattccgtgggaattcccagcacgatgcacttgag
ttccttctgtggttactgaatagagtgcatgaggacctcaattgttcacccaacaaaaag
gcgaagccttctgtaaagtctcccgttgatgaaaattctacacgaggctcccaacagcct
ggaattcagagttttgttcaagaacttttccaagcacagtacagatcatctctaacttgc
cctcactgccttagacaaagcaacacgtttgacccctttttgtgcatctccttgcccatt
ccccttcgccaaaccagggctttgaatgtaatcttggttttccactcgaagaatcaacga
tatctacggataggtcttgcagtcccactgcttggaaatgttgctgcacttcgcaaaatg
gtggcagacgagggcaaagtaactccagatcaggtcattttaacagagatttacaccaat
gggtttgagcgctccttctcagatgaggaagatttgaacacgattggcgaaggcgacaat
gtgtatgcgtttcaggccccgtttgtccgtggccctgctcaacattcagggggcttccag
aactcgagtgtaccaccttccaagtctgcttccaatagttttgaaggaaatccaacagat
ttcaatcagcatggagcaactggacaagtgctgcttctcatctgcaacactgcaggacca
agccagcaagctgtcaggtttggtccaccgttcctgctgagggaagatcattcgttgact
tgggatcagctgcatcattgcatcctcaacaaaatgtgctacctgatgaaaaatgaaacc
catcctcagaactttggacattctttcagaatccgagtggtggggggcttggcctccaac
tgcttcctctcatcccaagagttgagaccactccatcaacccgcagctgacagggcattg
cgttcctgtggagcgggtggtcccccacatataaaacttgtcttggagtgggatcaaagg
atgaaggacagcttgtttggaagtattcaggaggaagtaatccaggatgcagagagtgtt
cgcatccagcaacaggcccatcaacaggcacatggctgtacactggctgagtgctttgac
ttgtacacaaaggaggagcagctagccccagatgatgcctggcgatgtcctcactgtaaa
aaccttcagcagggcatggtcaagctcaatctatggactttgcctgacattcttattatc
cacctgaaacgatttcgccaggtgggagagagaagaaccaaactgtcgacgctagtcacg
ttcccacccattggcatcgatatggctccacacgtggtcaagaggaatcagagcggcagg
aactttttatcccattggtcaccatggcgacgaccacgcaccccttccgggagtaaagac
gaaaactttgtgtatgatttgtacgctgtgtgcaaccaccatggtgggatgcaaggaggt
cactatacagcgttctgcaggaactcagtggatggacaatggtacggctacgatgacagc
aatgtggaatttatcccagaacaagagatctgtactcgtggtgcctacatcctcttttac
caaaagaggaacactattccaccctggtcagccaacagctctgtgtcaggttccacgagt
tcatcgatctccgatcattggctcaaccgattaactggagacaacaagcgagggagctta
gtatcccgaggatccaccaattgcacgtcccttccttcatctccggattctcctgtcttc
cctgataatccaataaaggataaaaatgggggttttgaaatacgtccatttgtgcgtggt
attcagggaaggagcataagcatgaaggggtcacctgctgcttctgtacctaaagatgca
actgtaaaaaacacaccacttcgttggtcactgggatccaaggacagaccaaaatcaatg
cccggtgccctagtggagtacttggaatctggtcgccggcccagatgcacaaagaagtcc
attgtcccaataatgacaggttcgacagaccttgactcaacgccaactgcagatggacca
acagattgtaatgctgacagtgcaaagcagacgggaaagggattgaatgtggatcactgc
ccaacgcctgctgcaaacagggatggaaagacactttcagagcaaacaaccgtctcttcc
aacaaccttcagagaagctgtagcaaagagaactctatcgatgaaaagacaagtacactg
aagagagacagcaaacaaagaggcactgggaccttgcaaagaaagtcatctaaaatacca
gtcgataaatcagaagggtcaaaaggtgccccacttgttaaaactgaagagcccttacaa
ccaagagacaacagaataagtaagagtattagtggatatagtattggttctttgagcagc
ttagctctaagtgacactttgaagagaaggaaaggacatcatggtattgagaagatggag
aaatctccctcccaaaggagtacggatcttgaactaatctcatcttcaatccctcaagaa
gcagagaaggacaggaatactgaagaagcaaagctcattgacagaaagttttcatttttg
aaaacaaactttttgaagaaggattctaaaaggcccagagaatttgagaaatgtcggact
gtcgagaatatcggtgtgtcttcaaggatctctctctccaacggagctctgaatggtaag
cacagggcagactctatcaacgagagcagggcaaaagtagaagtaaacggtgccaaaaac
tctgtcaaacacagggaggaattaaacaacggcagaataagcctttctggagaagaaatt
cgacgatctcagagttcgtctaacattgtggtcaaggatgacttgaccttgaagaggtcg
acttcacttcagaagaatgggccggtttcacaacaggccagaagatacggtacaatgcaa
aggatgagatacagcacttcttcactgggaaggaaaaaacctgtgcctgaatcaagtttt
taa
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