Leucoraja erinaceus (little skate): 129708107
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Entry
129708107 CDS
T09122
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129708107
Enzymes [BR:
leri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129708107
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129708107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
ANCHR-like_BBOX
zf-RING_6
zf-RING_4
zf-RING_10
Sina_RING
zf-Nse
cas_Cpf1_2nd
Motif
Other DBs
NCBI-GeneID:
129708107
NCBI-ProteinID:
XP_055509640
LinkDB
All DBs
Position
23:complement(2739047..2829336)
Genome browser
AA seq
682 aa
AA seq
DB search
MERVNHIQAFCSLHISGVVHFESVIQLKLTADVALISWLVSMAAPASSTLEEQLTCSICF
DFFRSPVTTSCGHNFCKDCLEHFWEMIHIHSCPQCRETFDPGLPLQKNVTLNGMVEKWKR
DFAGSHEPEQAEQETEVELSCQPGCEGKETELPPGDECEQDLTCTPQEQTEEKANAELES
RSSSEDDQGDHVVTDPDEVVCDSCIDKKLKAAKSCLTCMVSYCEDHLRPHLENTAFKNHK
LINPMRDIEQGKCSLHDEYLEFFCTNDQSCICKECVVENHVYHETMPVARARAEKENELR
EAKLKIDKKINVANNAIEKLQNNSSSILNSVSEVKPNIEKQFSDLLEAVQTAQKEVLKFL
ENEQRASLKQADGIRIHLEQKCTELQKTKQQVEALAKQRNTVQFLQEFCEWKKSLLDDKL
PSVYIGLIDKLTGISAAVSESTEDILELLQTSYTEKLKTFAREDKLGFKTTVAVMRGSKR
CLAKKQPKIRNEFLKYGATLVFDPNTVHRYLRLVNDNRKVSNTAPWLHPYPEHPERFEHW
RQVLCTESFYMFRCYWEVEIHGEGIYVGMTYKSIDRKGAESNSCITGNDFSWCIQWTGKE
FLGWHGDVEVPGNVERFSRIGIYLDYQNRILSFYGVTDTMVLIHKFESSFTEPLYPAFYL
AKKEASVSLVAFEEDALKIETE
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagttaaccacatccaggcattctgctccttgcatatttcaggtgtggttcac
tttgaaagcgtgattcagcttaagctcacagctgacgttgccttaatctcctggttggtt
tcgatggctgctcctgcctcttcaactctcgaagagcagctcacttgctctatctgtttc
gatttcttccgatctcctgtaactacatcttgtggacacaacttttgtaaagactgcctc
gagcacttctgggaaatgatccacatccacagctgcccacagtgcagagaaaccttcgat
cccggcttacctctgcagaagaacgtgactttgaacggcatggtggagaaatggaagagg
gactttgctggatcacatgagcccgaacaagctgagcaagagaccgaggtggaactgagc
tgtcagcctgggtgcgaggggaaagagactgagttgccaccaggtgatgaatgtgagcaa
gatttaacttgtacaccgcaggagcagactgaggagaaagctaacgctgagttggagagc
aggagctcaagtgaagatgaccaaggtgaccatgttgtcactgatcctgatgaagtggtc
tgtgattcctgcattgacaagaaattaaaggctgcaaagtcttgtttgacctgtatggtt
tcatactgtgaagatcatttgagacctcaccttgaaaacactgcctttaagaatcacaag
ctgatcaacccaatgagggacatcgaacagggaaaatgcagtctgcacgatgagtatctg
gagttcttctgtacaaatgatcagagctgtatctgtaaggaatgtgttgtggagaatcat
gtttatcacgagacaatgcccgtcgcaagagcaagggctgaaaaagagaatgaacttcgg
gaagcaaaacttaaaatcgacaagaaaataaacgtcgcgaacaatgctattgagaaactc
cagaataactcctcctccatcttaaattccgtgtcagaggtgaaacccaatattgagaag
cagttcagtgacctcttggaagctgtccaaacggcacagaaagaggtgctcaaatttttg
gagaatgaacagcgtgcttcactgaaacaggctgatgggatccgcattcacctggaacag
aagtgcacggagctgcaaaagactaagcaacaggtggaagcactggccaagcagagaaac
acagtgcagtttttacaggaattttgtgaatggaagaaaagcctgctggatgataagctg
cctagtgtgtacatcggactgatagacaaacttactggaattagcgctgctgtttcagaa
tcaacagaggacatccttgagttgctgcagacttcctacacagagaaactaaagacattt
gctagagaagataaattgggattcaaaacaactgtggcagtgatgcgtggatcaaaacgt
tgccttgccaaaaaacaaccaaagatacgaaatgaatttctgaaatatggtgccacgttg
gtatttgacccgaataccgttcacaggtatcttcgtttggtgaacgacaaccgtaaagtt
tccaacactgctccgtggctacacccctaccccgagcaccccgagaggtttgaacactgg
cggcaagtgctgtgcaccgagagtttttacatgtttcggtgctactgggaagtggaaatc
cacggagaagggatctatgtcggcatgacttacaaaagcatagacaggaaaggggctgaa
agcaatagctgcatcacgggcaatgatttctcctggtgcatacagtggacgggcaaggaa
ttcttgggttggcatggtgatgtggaagtgccggggaacgttgagagattcagccggata
ggaatatatttggactatcaaaacaggatcctgtcattttacggtgttacagacaccatg
gttttgatacataagtttgagtcatcgttcacggaaccactttatcctgcgttttatctc
gccaagaaggaagcgtcggtatctctggttgcgtttgaagaagatgcgttgaaaattgaa
accgaatga
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