Leucoraja erinaceus (little skate): 129708120
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Entry
129708120 CDS
T09122
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
leri01001
]
129708120 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129708120 (prpf4bb)
Enzymes [BR:
leri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
129708120 (prpf4bb)
Protein kinases [BR:
leri01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
129708120 (prpf4bb)
Spliceosome [BR:
leri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129708120 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Pox_ser-thr_kin
ABC1
CoV_S1_C
Motif
Other DBs
NCBI-GeneID:
129708120
NCBI-ProteinID:
XP_055509663
LinkDB
All DBs
Position
2:27136314..27207979
Genome browser
AA seq
1068 aa
AA seq
DB search
MRSAPAGWQLGRAGLRRRAAGRDRGGPERGSERSPGEMADVESQEQEAAATEADWSRNER
LVATAAQEDQEAADSSGKSGNEENGEVSDENRDPNTAPVKPIKHKKKKHKHRSKHKKHKH
TSEDDKERKHKHKHKHKKHKRKVAEGLEKDDDHSIKRPKFDDYALLEDLEKQRAMIKAEL
DSELMEGKVQSGMGLILQGYVSDSEEEGEIHEKAHNGERVASGRDVSEMLPARDKVKREA
VESKPASKRKSRSKDRTKHAKAEKKKNRVGSEHRKEKEKMRSESHERKRSKSPLKGSKAG
EKSKSPISAKRRSQEKKRKLTPTEDSSKPKDRKTMAESKTRERNKKSKSPVVKPSKAVDR
SQRSKSKEREKRPRKSEVEKDKKPAKSPPRDAPSGKENRSPLRRPPLSPKRRSLSPKHRE
RSTKHSRSPIINDRLPKPSQSPSRNMSPPRRAKSRSIERRRRENDRARGLSPRMRSRDDP
PNRLDRTRDISTSRRSPIRRRLSRSPIRRRSRSLLRRSRSPRRRSRSRRRSLDRDWNRRS
RSRRRRSRSRGRRRRRSGSRDKEDKFKGSLSEGMKVEQESSDDNLEDFDVEEEDEEAVIE
QRRKERQAIVQKYRHPNEDSNMSGLSEPNSPQSSSRSRSPSPDDILEQAAADVKEYEREN
VDTFEASVNAKRNLMALEQKEGAALKKPTVPDMFTESDDMFAAYFDSAHLRAAGFGKDFK
ENPNLRDNWTDAEGYYRVNIGEVLDKRYSVYGYTGQGVFSNVVRARDMARASQEVAVKII
RNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLK
KYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILKLCDFGSAS
HVADNDITPYLVSRFYRAPEIIIGKIYDYAIDLWSVGCTLYELYTGKILFPGKTNNHMLK
LMMDLKGKMPNKMIRKGVFKDQHFDQNLNFMYIEVDKVTEREKVTVMSTINSTKDLLADM
IGCQRLPEDQRKKVHQLKDLLEQILMLDPAKRVSINQALQHPFIQEKI
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtgctcccgctggctggcagctcggccgggccgggttgaggcgccgcgctgca
ggccgggatcgtggaggaccggagcgagggtcagagcgcagccccggcgaaatggcggac
gttgagagccaggagcaggaggcggcggcgaccgaggccgactggagccgcaacgagcgc
ctggtggccaccgcggcgcaggaagaccaagaagccgcggattcctctgggaaaagtggc
aacgaagagaatggggaagtgtcggacgagaaccgcgaccccaacaccgcgcccgtcaag
cccatcaaacacaagaaaaagaagcacaagcatcggagcaaacacaagaagcacaagcat
acttcagaagatgacaaggagcgcaaacacaagcataaacacaagcataaaaagcataag
aggaaagtggccgaggggttggagaaggatgacgatcactcaattaaaagacccaagttt
gacgactatgctctgttggaggacttggagaagcagagggcgatgataaaggctgaattg
gacagtgaactcatggaaggaaaggttcaatctggcatgggcttgattttgcagggatac
gtgtcggactcggaggaagagggagagatccacgagaaagcccacaacggcgaacgggtc
gcttccggccgcgacgtttccgaaatgctgcccgcgagagacaaagtgaaacgggaagcc
gtcgaatctaagcccgcttcaaagaggaaaagcaggtcgaaagacaggactaaacacgct
aaggcggagaaaaagaaaaaccgggtgggctcggagcaccggaaagagaaagagaagatg
cggagcgagtcgcacgaacggaaacgctcaaagagtcccctcaaaggcagcaaggccgga
gagaagagcaagtctcccatctcggctaaaagacgatcgcaggagaagaaacggaaattg
actccaacggaagatagctccaagccgaaggatcgcaaaaccatggcggaaagcaaaacg
agagagcggaataaaaagtccaagtctcccgtggtgaagcccagcaaggcggtcgacaga
agtcagagatccaaatccaaagagcgcgagaagaggccgcggaaatctgaggtggaaaaa
gataaaaaacccgcaaagtcgcccccgagggacgcgccctctgggaaggagaaccgatct
cctttgaggaggcccccactctctcccaaacggaggagcctgtccccaaagcaccgggaa
aggtcgaccaagcacagccgatcaccgatcattaacgatcgcctgcctaaaccaagccag
tctccctcgcggaatatgtccccgcccagaagagctaaaagcagatctatagagcgaagg
cggagagagaacgaccgtgccaggggtctatcaccaagaatgcggtctcgagatgaccca
ccgaacaggctggatcgaacaagagatatcagcacgtctcgtcggtcccccatcaggcga
aggctcagcagatctccgattcggcggcgatcacgctcacttctcaggcgaagccgttct
cccaggagaagaagccgatctaggaggaggtctttggacagagactggaatcggcgaagc
aggtctcgccgaaggcgatccaggtcacggggtcggcgcagaagaagaagcggaagtcga
gacaaagaagataaattcaagggaagcctttctgaaggaatgaaagttgaacaggaatct
tctgatgacaatctggaggattttgatgtagaagaggaagacgaagaagctgttattgaa
caaagacggaaagaaagacaggcgattgttcagaaatatagacacccaaatgaagacagc
aacatgtctgggttgtccgaaccaaatagtccccagagcagctcgcggagccgctccccg
tctcccgacgacatcctggagcaagccgccgccgacgtcaaggagtacgagagggagaac
gtcgacacgttcgaggcctccgtcaacgccaagcggaacctcatggcactcgagcagaaa
gaaggagctgctctgaagaagccaactgttccagatatgtttacagaatctgatgacatg
tttgctgcttattttgatagtgcccatttgagagcggcaggctttgggaaggatttcaaa
gaaaatcccaatctcagggataactggaccgacgcagaaggatattatagagtgaatatt
ggggaggttctggataagcgttacagtgtatatggttacactgggcagggagtcttcagt
aacgttgtacgtgccagagatatggccagagccagccaggaggtggcagtgaaaatcatc
agaaacaacgagctcatgcagaagacggggttgaaggagctggagttcctgaagaagctg
aacgatgccgatccagatgacaagttccactgcctgaggctcttcaggcatttctaccac
aagcaacatctctgcttggtctttgaacctctgagcatgaatttgcgagaagtgctgaaa
aaatatgggaaagatgttggtcttcatataaaggcggtgagatcatacagtcagcagctg
ttccttgctctgaagctgttgaagagatgcaacatcctccatgccgacatcaaacctgac
aatatcctggtaaacgaatccaaaaccatcctaaagctttgtgactttggctcagcttct
catgtggctgataacgatataactccgtacctcgtcagccgattctaccgtgcgcctgaa
atcatcattgggaagatttatgattatgccatagacttgtggtcagtcggctgcaccctt
tatgaactgtacacggggaaaattctctttcctggcaaaaccaacaatcacatgctgaaa
ctcatgatggacttaaagggcaaaatgccaaataagatgatcagaaaaggggtcttcaag
gatcagcactttgatcagaatctgaacttcatgtacattgaagtggataaagtgacagaa
cgggagaaagtgactgtcatgagcactattaactccacgaaggacctactggcggacatg
atcggctgccagcgcttgccggaagatcagcgcaaaaaggttcaccagctgaaggacttg
ctcgagcagattctcatgctcgaccctgccaaacgtgtcagcatcaaccaggccctgcag
caccccttcattcaggagaagatttaa
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