Leucoraja erinaceus (little skate): 129708123
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Entry
129708123 CDS
T09122
Name
(RefSeq) zinc phosphodiesterase ELAC protein 2-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
leri03016
]
129708123
Enzymes [BR:
leri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
129708123
Transfer RNA biogenesis [BR:
leri03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
129708123
Prokaryotic type
129708123
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
SR-25
Lactamase_B_6
Motif
Other DBs
NCBI-GeneID:
129708123
NCBI-ProteinID:
XP_055509662
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Position
23:complement(4801336..4840869)
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AA seq
862 aa
AA seq
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MSAAGSLHRALAGWTRRLCCSSSSSSSSSCSSSSPHLRQLNMSLRPARQRRRDKPPPDTL
RHLKSREKRKHGDMHGPATVYMQVVGTGSRENGASLYVFSEYNRYLFNCGEGTQRLMQEH
KLKISRLDNVFVTRMSWNNVGGLSGLILTLKDTGVPKCVFSGPPQFEQYLAAIRTFSGSL
QGIDLAVRPYTEPHYVDDTMAVYQVPIFAKLDFKKSPGSPGQSSSPKSTKRQRKDSGDHL
PEKQNDNPERSPKKSRDPSLVVAFVCKLHPKKGNFLVMKAKELGLPVGTSAIGPIVAALK
AGKSVVFEGKEIRPEEVCTPADPGPTFLVLECPSREFIQPVCENEQLQKYLAGGSEGPTA
LVVHMVPEAVLADNVYKSWMARFGPTTEHLILNENNQTVHNLRSHKIQTQLNLIHSDIFP
LLKTFQTKDEPASLSVPIVRGHCLLKYQLRPKFEWQRDAVVEVDTKEFINEAMEIPGFMA
QVEECKRVLAANPALPSDNVDKYPEVVFLGTGSAIPMKIRNVSSIILNIDSTRSILLDCG
EGTFGQLCRHYGNDVDRVLCNLSAIFVSHMHADHHTGLINILLEREKALVALGESFSPVT
LVGPAQIMNWLNQYHSHCQKILRHINLIPAWHLVEGSKVTKFNTQDLIHSLLKKLELEKF
QTCVVRHCRNAFGCILQHNSGWKIVYSGDTMPCTNLIQTGQNANLLIHEATLEDGLEEEA
IEKTHSTTSQAIDVGMKMNAEFIMLNHFSQRYAKIPLFSADFNEKVGIAFDHMRVRFGDF
KVVPKLIPSLKTLFADEIEEMEERREKRELRQLKEVHGSFSTNGPGTRGQSSVPRISETA
DEMKRELEGSDQDAVHKRVKLT
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggccggcagcttgcaccgggcactagctgggtggacgcggcgcctctgctgc
tccagctccagctccagctccagctcctgctccagctccagcccgcacctccggcagctc
aacatgtccctcaggccggccagacagcgcaggagggacaagcctcctcccgacaccctg
cgccacctcaagtccagggagaagaggaagcatggggacatgcatggtcctgccactgtg
tacatgcaggtggtggggacgggcagcagggagaacggtgcatctctctatgtattctca
gaatacaacagatatctcttcaactgtggtgaagggacacagagactgatgcaggaacac
aagctaaagatttctcgtctcgacaacgtgtttgtgaccaggatgagttggaacaatgtt
ggaggattatctggtttgattttgacattgaaggacaccggggttcccaaatgtgtcttt
tccggaccaccacaatttgagcaatacttggcagcgataagaacattctctggctcgcta
caaggaatagatttagctgtacgcccttacacagagccacactatgttgatgatactatg
gctgtgtatcaggtgcccatatttgccaaactggacttcaagaaatccccagggtcccct
ggacaatcaagttcaccgaaatctacaaagcggcaacggaaagattctggggatcacctg
ccggaaaagcaaaatgacaatccagaaagaagcccaaaaaaatcaagagatccttccctg
gtagtggcttttgtttgcaagcttcaccctaagaaaggaaatttccttgttatgaaggca
aaggagcttggtcttccagtaggcacctcggccattggtcccattgttgctgccttgaag
gcaggaaagagtgttgtgtttgaggggaaggagatcagaccggaagaagtgtgcacgcct
gctgatccggggcccactttccttgtattggaatgtcccagtcgggagtttatccaaccc
gtgtgtgagaacgaacagctccaaaagtatctggctggtgggagtgaaggccccactgca
ttagtggtccacatggtgcctgaggcggttttggcagacaatgtgtataagtcgtggatg
gcaaggtttgggccgaccacagaacacctaatcctcaatgaaaataatcaaaccgttcac
aatctgcgtagccataaaatccagacgcaactcaaccttattcattcggacatcttcccg
ctattgaaaacctttcagaccaaggacgagcctgcctccctctctgtgccaatagttcga
ggacactgtctgctaaagtatcaactacggcccaaatttgaatggcaaagggatgctgtg
gttgaagttgacacaaaggaatttattaatgaggcaatggaaatcccaggcttcatggca
caggttgaagagtgcaagcgagtattagctgcaaaccctgctcttccatcagataatgtt
gacaaatatccagaggtcgttttccttggaacgggctctgcgatccccatgaagatccga
aatgttagctccatcattctaaacatagactccacacgatcaatattattggactgcggt
gaaggcacctttggacaactctgtcgccactatggtaatgatgtggacagggtcctctgt
aatttgtcagccatctttgtgtcccacatgcatgctgatcatcacacaggcctgataaat
atattgttggaacgagaaaaggctttggttgccctgggtgaatccttcagcccggttaca
cttgtgggcccagcacagatcatgaactggttgaatcagtaccacagtcattgccagaag
attctgcgacatatcaatctcattcctgcatggcatcttgtggaaggtagcaaagttacc
aagttcaacactcaagacttgatccactctttgttaaagaagcttgaactggaaaagttt
cagacctgcgtggtgcgacactgcaggaatgccttcggctgcatcctacagcacaattca
ggctggaaaattgtgtactcgggagataccatgccttgtacaaacctcattcagacaggg
cagaatgccaacctgctgattcacgaggctacactggaagatggacttgaggaagaagct
attgagaaaacacacagcacaacctctcaagccattgatgtgggcatgaagatgaatgca
gaattcataatgttaaaccatttcagccagagatatgcaaagatccccctgttcagtgcg
gacttcaatgaaaaagttggaatagcatttgaccatatgagggttcggtttggtgacttc
aaggtggtgcctaaactcattccatctctgaaaaccctatttgcggatgagattgaagag
atggaggaacggcgtgagaagcgagagcttcgacagttgaaggaggtccacggctctttc
agcacaaatggaccagggactcgggggcagtcttcagttccgaggatcagtgagacggct
gatgaaatgaaacgggagctggagggctctgatcaagatgcagtccacaaaagagtaaaa
ctgacttga
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