Leucoraja erinaceus (little skate): 129708182
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Entry
129708182 CDS
T09122
Name
(RefSeq) platelet endothelial cell adhesion molecule-like
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04148
Efferocytosis
leri04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129708182
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129708182
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
leri04090
]
129708182
00536 Glycosaminoglycan binding proteins [BR:
leri00536
]
129708182
04091 Lectins [BR:
leri04091
]
129708182
CD molecules [BR:
leri04090
]
Proteins
129708182
Glycosaminoglycan binding proteins [BR:
leri00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
129708182
Lectins [BR:
leri04091
]
I-type lectins (Siglecs)
129708182
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
Ig_C17orf99
I-set
VEGFR1-3_N_Ig-like
V-set
Zwei_Ig_N
Ig_4
GPR137_N
Herpes_gE
TEX50
Motif
Other DBs
NCBI-GeneID:
129708182
NCBI-ProteinID:
XP_055509772
LinkDB
All DBs
Position
23:8795306..8829947
Genome browser
AA seq
597 aa
AA seq
DB search
MSKTTILFFTQLLCGIGHVQTDVTIQKTEIKSDPEASAQAGSSITLTCSVSIVATPDLLN
QISYSLYKGSQKNVLLNTSMAPEPKYSFTIQSARATHTGYYVCVVNVGDKTATSDTLYIE
VTGQIQRPRLAIQPMTVIVGSQIELRCDSAEEIPPLDFTFYKYKNGRPSPAGQKASDTNF
VTHTLKVTETTDQVYSCKVKGRSSATTSINSEPVTITVQDPFSSHLFTIEPQSRIFEGDD
FTMRCTVQMSSLIPSSTKAELTITKGTTSIANSVTGEAKISKKATADDTGQYTCHAMWKE
TLKILVKQVTVAVPVSKPSLNSTAFNSIVAQGDRLNLTCAVVRGSWPIIYTFYKGTPENS
LHRSILNATAGVYTIPSADTADSGEYFCQAENNAGVKHRSERSQNININVKVPVSEPKVN
LLTSGTTYEIGKRISIRCHSTNGSSPVTYSLFLNQRFIHSVKNCTTEPAVFNILINNTKD
GGVYKCKAENEIPNSFKFSEGINFTILGTKPMWLEYHMPRILAFLLLFLICCYVHVKYRK
NKRRKIVKQQNQGSVKDNTVLYSKVKGTAHPNEEKDYVNIPSLKGTGTDSECDCEMN
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaccaccatcctgtttttcacccagctgctatgtgggattgggcatgtccaa
acagatgtgacgatacaaaagacagaaataaaatccgaccccgaggcatcagcacaagcg
ggaagctccattactctgacatgttcagttagtatcgtggcaacgcctgatctcctaaat
caaatttcatacagtttatataaaggatcacaaaagaacgtcctgctgaatacctccatg
gctcctgagccaaaatactcttttacaatacaatctgctcgagcaacacatactggatac
tatgtctgtgtcgtgaacgtgggagataaaacagctacgagcgacaccttatacatagaa
gttacaggacaaatacagaggccgcgacttgccatacaaccaatgacggtgatagtagga
agtcaaattgagttgcgctgcgattctgctgaagaaattcctcctcttgactttacgttc
tacaaatataaaaatggaagaccttcccctgcgggacaaaaagcatccgatacaaacttt
gtaacacacacgcttaaagttacagaaacaacagatcaagtctacagctgtaaggtcaaa
ggaagaagctcggcaacaacctcaatcaacagtgaacctgtcaccataactgtgcaagat
ccattttctagtcacctctttacgattgaaccacaatctagaatatttgaaggcgatgac
tttaccatgaggtgcacagttcagatgtcatcattaattccatcctctacaaaagctgaa
ttaacaatcacgaaaggtacaacttcgatagccaacagcgttactggcgaagctaagatt
tctaaaaaagcaactgctgatgatacgggacaatacacttgccacgcaatgtggaaggag
acattgaaaattcttgtaaaacaggtgactgtggcagtaccagtttccaaaccaagtcta
aattcaacagcctttaatagtattgtggctcaaggtgatcgtttgaatctcacatgtgct
gtggtgaggggatcttggccaataatttacacattttacaaaggaacaccagaaaactct
ttgcatcggtcaattttaaatgctactgccggagtctatactattccatcggctgacact
gcagacagtggagagtatttctgtcaagcagaaaacaatgcaggtgtaaaacatcgaagt
gaaagaagtcagaacattaatataaatgtaaaagttccagtctcagagccaaaagtaaat
ctcctcacttcaggaaccacatatgaaataggaaaacgcatatccattcgatgccactca
acaaatgggagctctcctgtgacttactcgctattcttaaaccaaagattcatccactct
gtcaagaactgtactacagagcctgcggtttttaatattctcataaataataccaaagat
ggcggcgtgtacaagtgcaaagctgaaaatgaaattccaaactcattcaaatttagtgaa
ggaatcaactttaccatattgggtaccaaaccaatgtggttggaatatcacatgccacgt
atacttgcttttttattattatttctcatatgttgctatgttcatgttaaataccgaaag
aataaaagacgcaaaatagtgaaacaacaaaatcaaggatctgtgaaagataatactgtg
ctttacagtaaagtaaaaggaacggcacatccaaatgaggagaaggactacgttaacatc
ccatcattaaaaggaaccggaactgattcagagtgtgattgtgaaatgaactaa
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