Leucoraja erinaceus (little skate): 129708185
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Entry
129708185 CDS
T09122
Symbol
alyref
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03013
Nucleocytoplasmic transport
leri03015
mRNA surveillance pathway
leri03040
Spliceosome
leri05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129708185 (alyref)
09122 Translation
03013 Nucleocytoplasmic transport
129708185 (alyref)
03015 mRNA surveillance pathway
129708185 (alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129708185 (alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129708185 (alyref)
03041 Spliceosome [BR:
leri03041
]
129708185 (alyref)
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129708185 (alyref)
TREX complex
129708185 (alyref)
Spliceosome [BR:
leri03041
]
Complex C
Other components
EJC/TREX
129708185 (alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129708185 (alyref)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
FYTT
Motif
Other DBs
NCBI-GeneID:
129708185
NCBI-ProteinID:
XP_055509773
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All DBs
Position
23:8936335..8944269
Genome browser
AA seq
267 aa
AA seq
DB search
MGDKLDMSLDDIIKLNRQKSPGGRGGRGGGGRGGGGGGGMGRGSGRIGAGGLAGRGAAGV
RGGGGGGGGLGVGLMRNRQSAMRGRNRPAPYSRPKQLPDKWQHDLFDSGFGASGGVETGG
KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQY
NGVPLDGRPMNIQLVTSQIDAQRRPIVGGNRAISRIRGIAFGGGNRRSRGGNRGGRGGRG
GRNLRQQLSAEELDAQLDAYNARMDTS
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaaactcgacatgtccctggacgacatcatcaaactgaaccggcagaaaagc
ccgggcggccgcggaggaaggggtggcggaggccgcggcggaggtggcggcggcggcatg
ggccgcggatcagggcgaatcggagcgggcggcctggccgggcgaggagcggctggagtc
cgaggcggcggcggcggcggagggggcctgggtgtaggcctcatgcgcaacagacagagc
gcaatgcgagggagaaaccgaccagctccttacagcaggccgaagcaactcccagacaag
tggcaacatgacctttttgacagtgggtttggagctagcggaggtgttgagactggtgga
aagctcttggtgtcgaacttagactttggcgtgtctgatgcagatatccaggaacttttt
gctgagtttggaacattgaagaaagcagctgtacattacgatagatccggtcgaagtttg
ggaacggcagatgtacactttgaacggaaggcagatgctttgaaagccatgaagcagtat
aacggtgttcccttggatgggcgaccgatgaacattcaactagttacctcacagattgat
gcccaaagaagacccatagttggaggaaacagggccataagccgaattcgtggtattgca
tttgggggtggaaatagacgttccagaggaggcaacagaggcggaagaggtggtcgaggt
ggaagaaatttgcggcagcagctttcagcagaagagctggatgcccaattggatgcttat
aatgctaggatggacacaagttaa
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