Leucoraja erinaceus (little skate): 129708333
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Entry
129708333 CDS
T09122
Symbol
itgb4
Name
(RefSeq) integrin beta-4
KO
K06525
integrin beta 4
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04382
Cornified envelope formation
leri04510
Focal adhesion
leri04512
ECM-receptor interaction
leri04810
Regulation of actin cytoskeleton
leri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129708333 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129708333 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129708333 (itgb4)
04810 Regulation of actin cytoskeleton
129708333 (itgb4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129708333 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
leri04147
]
129708333 (itgb4)
04515 Cell adhesion molecules [BR:
leri04515
]
129708333 (itgb4)
04090 CD molecules [BR:
leri04090
]
129708333 (itgb4)
Exosome [BR:
leri04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
129708333 (itgb4)
Exosomal proteins of bladder cancer cells
129708333 (itgb4)
Cell adhesion molecules [BR:
leri04515
]
Integrins
Integrin beta subunits
129708333 (itgb4)
CD molecules [BR:
leri04090
]
Proteins
129708333 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Calx-beta
Integrin_B_tail
I-EGF_1
EGF_Teneurin
EGF_integrin
EGF_2
Interfer-bind
EGF_TEN
DUF4998
Motif
Other DBs
NCBI-GeneID:
129708333
NCBI-ProteinID:
XP_055509984
LinkDB
All DBs
Position
23:18881795..18969519
Genome browser
AA seq
1965 aa
AA seq
DB search
MLIQFIQHRSNDLQILGDPGYGDNAAKCRSATVKGGTGAEGRVASISSYYLLVRPKIFHY
NYKSDAQIYKVSIVNVFELRCRQARLCLIPVEFGAATVGPGLREMEQWKMLVSFLMVVLL
AAGCQGNHCTASRAKTCTLCIRVAEDCSYCADKNFTLPRCDLASNLLSSCKKIVAMKSEM
HIIQSTRIDTSSKRTQISPQQVSMSLRAGEERTLNFEVFQPLESPIDLYFLMDFSYSMQD
DLDNLKKLGLRLADVVKNMSNDYTIGFGKFVDKVSVPQTDMRPLRLKQPWPNSDAPFSFK
NVIPLTSNVNSFIEKLQKERISGNMDAPEGGFDAILQVAVCKGDIGWRPDSTHLLVFSTE
SAFHYEADGSNVLSGILERNDEQCHLDNSGSYTQDTEQDYPSIPTLIRLLSKHGIIPIFA
VTNHSYSYYEKLSKYFPVSDIGQLQEDSSNILDLLRHAFENIRSKMEIRANRVPKTMRAS
VSSLSAAKPQSESSTFTVIPGQVNKFRLSLKALENDGDIHLCNMPQGDQEGTIILKPSTS
TDSLSLDASLLCAQCPCEKKPEVDSPLCSSNGNFVCGQCQCKENWRGLRCDCLMGVEGNI
ADCIDPKGNSSVPCSRHGECQCGICHCLPSEKHLEHFDGKYCQYSNLLCPRYAGFTCNDR
GKCFQEKCLCDDGWTGPSCECPISNATCIDPNGGLCNGKGICECGRCKCEDKNVDPTCGA
NTYLQLLGLCEDTRTCVQCQAWNTGEKKGQNCNKCDDVFEFVEELKEDKEVTESCQFRDE
DDDCTYYYTVEKLPNINTTYLQVRKKKDCPPGGFLWLIPLIMFLMMLLGLLLLLCWKYCA
CCRACCAKLPCCAMLPCCAGGTLVGFKEDHYMLRQSKLTSNSLDTPMVRTNKLDGTDIVR
WKVTDNVHKGATAHSQLISPKDSVLYNLSLRAARVFNNELINPDSRESEQLRLLADENLN
EVYKHIPGAQTVQKTKFRTQPHAGKRSDLTIIDTQLPAPRSAEPEIMKLTEHQVTMGTFN
DLKVVPGYYTVASDRGARGQVEFQDGVELVDVRVPLFVKDEDDDEKRLLVEAVDVPLGTA
EITKRFVDIPIIKEAAKSSISFLQPSYTCQRQDKVANITLLREITEDGRTQVSYKTRDLT
AKDGTDYISMENEVTFLPGETRKEIPVKLLEQTEVDSLLGNEQIKQFLLELYKPRNGAKL
GKFPRTTVTIGDDNVRHRMDLNQSLFPIDSPPLNVKPQPIDSKRIRVNWSPAQGDVTGYK
LKYWPEDDEFSSKTVETRNTSVELTDLQPSCDYAMEVSAYNTLGADCSNTVSRTLDSASE
TIPLKQGLTSIDAPPSNVKVQPINSKKLRVNWIPPPGRPTGYKVTYWIEGDENSSQVVTT
TTPSAELPDLYPYCDYEMNIFAYNALGAGPRSETVSCRTPEDLPNEPGRLAFNVLSPTVT
QLSWAEPSEANGEIVEYEVSYTVVTDENQPIGPKKMAKINKPKKRMVMIENLKEEQPYRY
AVRARNGAGWGPPREATMNLSTQPKRPMSIPIIPDIPIIDAEAHDEYENFLMYSSDVMRS
PRPSVSDDTDMQMNGRWETNTTFSGGTQGTITQNTGIHSQQFTRTIGGVSETLAPGQGQW
LSAQGPPMHGMQGVDYTVTQRMIGGRRRTESEDVNAALENLEMALHENRSPGVPNTPTRL
VFSALGATSLKVSWQNPPCEREVLAYRVTYQSLAGGEMQTVDIPDPNENSLIINDLLPNY
SYMFKVKALSDKGWGPDREGVITIESKVDPMSPLSPIPGSPFTLSTPSAPGPLVFTAINS
ELLKLSWEKPRKPNGDIMGYLVTCEPLGGQDETKTYQVEGDDAEMTLMVPHLSENVPYKF
KVQAKTTQGFGPEREGIITIESQDAGSISKFSKQTVMRNEGFTMPGNMSTETSLMQSTTD
PFFSDGMTVTTQRMEGGTSVTQQVTRTMMTSGTVTKQVERKFYEA
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atgttgattcagttcattcagcacagatcgaatgatttacagatattaggggatccggga
tatggggacaatgcagccaaatgtagatcagccacggtgaagggtggaacgggcgctgag
ggccgagtggcctcgatcagttcctattaccttctcgtcaggccaaagatctttcattac
aattataaatcagacgcacagatttataaagttagtattgtgaatgtgtttgagttgaga
tgtcgccaagcgcgcctgtgcctaatacctgtggagtttggcgctgcaacagttggtccc
gggcttcgggagatggagcagtggaagatgttggtctcgttcctgatggttgttctcctt
gcagctgggtgtcagggcaatcactgcactgccagtcgagcaaagacctgcaccttgtgt
atcagagtggctgaggactgttcatactgtgctgacaagaacttcacgttgcccaggtgt
gacctagcgagcaatctcttgtccagctgtaaaaagattgtcgcaatgaagtccgagatg
cacataattcagagcactcggattgataccagtagcaaacgcacccagatctcaccacag
caagtgtccatgagcctgagggccggagaggagaggaccctgaacttcgaggtgttccag
ccactagaatctcccattgacctctacttcctcatggacttctcctactccatgcaggat
gatttggacaacttgaagaagttggggcttcggctggctgatgtagtgaagaacatgtcg
aatgactacaccatcggctttgggaagtttgttgacaaggtgtctgttccacagacagac
atgaggccattgagacttaagcagccttggccaaacagtgatgccccattctccttcaag
aacgtcattcctctgaccagcaatgtaaacagtttcatcgagaagctgcagaaggaaaga
atctcgggcaacatggacgcacctgaaggtggatttgatgcaattctgcaggttgcagtc
tgcaagggtgacataggttggaggcctgacagcacccatctgctggtcttctcgactgaa
tctgcctttcattatgaagctgacggctccaatgtcctctcgggcatcttggaaaggaat
gatgagcaatgtcatttggacaacagtggcagttacacccaggataccgagcaagactac
ccttccatcccaactctgatacgccttctcagcaagcatggcattattcctatctttgct
gttactaaccattcatattcctactatgagaaattgagcaagtattttccagtgtctgat
atcgggcagctgcaagaggactcgtccaatatactcgacctgctgcgccatgcatttgag
aacatccggtcaaagatggagatccgggctaacagggtccccaaaacaatgagagcctct
gtctcatcgttgtcggcggccaagccgcagagcgagtcgtccaccttcaccgtcatcccg
ggacaggtgaataagttccgcctcagtttgaaagctttggaaaacgacggtgacattcac
ctgtgcaacatgccccagggcgaccaggagggaactattattctcaaacccagcacttcc
accgactctctgtcgcttgatgcctcactgctgtgtgcccagtgcccttgtgagaagaaa
ccagaggttgactcgcccctgtgcagttccaacggtaactttgtctgcggacagtgccag
tgcaaggagaattggcggggtcttcgctgtgactgtctcatgggcgtggagggaaacatt
gctgactgcatcgaccccaagggaaacagcagtgtgccttgctctagacatggggagtgt
cagtgcgggatctgccactgcctcccctcagagaaacatctagaacactttgacgggaag
tactgtcaatacagcaacctgctgtgcccgcgctacgccggcttcacgtgcaacgatcgg
ggtaaatgctttcaggagaagtgcctttgtgacgatggatggacgggtccctcatgtgaa
tgtccgatcagtaacgctacctgcatagatcctaacggagggctgtgcaacggcaaaggc
atttgcgagtgtggacggtgcaagtgtgaagataaaaacgtagacccgacctgcggtgcc
aacacctacttgcaactgctcgggctgtgtgaagacactcggacttgtgtccaatgccag
gcctggaacactggggagaagaaagggcaaaactgcaataagtgcgacgatgtgttcgag
tttgtggaagaactgaaggaagacaaggaggtgacggagagctgccagttccgtgacgag
gacgatgactgcacctactattacacggtggagaaactcccaaacatcaacaccacctac
ctccaggtgcggaagaagaaagactgccctcccggaggctttctctggctcatcccgctc
attatgttcctgatgatgctcctgggcctgttgctgctgctgtgctggaaatactgtgcc
tgttgccgggcctgctgtgcaaagctcccctgctgtgccatgctgccatgctgtgctgga
ggcaccctggtggggtttaaggaagaccactacatgctccgtcagagcaagctcacctcc
aactccctggacacgccgatggtgcggaccaacaaactggacgggacggacattgtgcgg
tggaaggtgacggacaatgtgcacaagggagccactgctcactcccaactcatcagcccc
aaggactctgttctctacaacctgtcgctgcgggcagcccgagtgttcaacaacgagctg
atcaacccggactccagggagtctgagcagcttcggctcctggcggatgaaaacctcaac
gaagtgtataaacatattccaggggctcagactgtccagaaaacgaaattcaggacccag
ccacatgcaggaaagaggtcggacctgaccatcattgacactcagctgccagcgccccgt
tcagcagaaccagagatcatgaagctcactgagcaccaggtcaccatgggaaccttcaac
gatctgaaagtcgtcccgggctattacacagtggcgtctgatcgaggtgcccggggccag
gtagagttccaggatggggtggagctggtggacgtgcgggtgccgctctttgtgaaggac
gaggatgacgatgagaagcggctgctggtggaggcggtggacgtgccgctgggaacggcg
gagatcaccaagcgcttcgtcgacatccccatcatcaaagaggccgccaagagcagcatc
agcttcctgcagccttcctacacgtgccagcggcaggacaaggtggccaacatcactctg
cttcgtgaaatcaccgaggacggacgcacccaggtctcctacaaaacacgagacctcacc
gccaaggacggcacggattacatttcaatggaaaacgaagtcaccttcctccctggggag
acacgcaaggagattcccgtcaaactgctggagcagacggaggtggactccctcctgggc
aacgagcagatcaaacagttcctgctggagttgtacaaaccccgtaatggtgcgaagctg
ggcaagttcccccgcaccaccgtcaccatcggcgatgacaacgtaagacataggatggat
ctcaaccaatcgctgttcccaattgattcgccgcccctcaacgtgaaaccacagccaatt
gacagcaagaggatccgtgtgaactggagcccagcccagggggatgtgacgggttacaag
ctgaagtactggcctgaagacgatgagttctcctctaagacggttgagacgaggaacacc
tcggtcgagctcaccgacctccagcccagctgtgactacgcgatggaggtgtcggcctac
aacacgctgggcgccgactgctccaacaccgtgagccgcacgctcgacagtgccagtgaa
actattccactcaagcagggtttgacctccatcgacgccccaccctccaacgtcaaggtg
cagccaatcaacagcaagaagctccgcgtgaactggatcccgcccccgggtcgaccaacc
ggatacaaggtgacctactggatcgaaggggacgagaattcctcgcaggtcgtgaccacc
accacaccgtccgctgagctcccagacctgtacccctactgcgactacgagatgaacatc
tttgcctacaacgccctgggcgccggcccccgctccgagaccgtcagctgccgcacaccg
gaagacctacctaatgagccgggtcgattggcgttcaacgtcctttcacccacggtgaca
cagctgagctgggctgagccgtcggaggccaacggggagattgtggagtatgaagtgagc
tacaccgtggtgaccgacgaaaaccagccgattggaccaaaaaagatggcgaagatcaac
aagccaaagaagaggatggtgatgatcgagaacctgaaggaggagcagccgtatcgctac
gcagtgcgggccaggaacggggctggctggggtccccctcgagaagccacaatgaacctg
tcgacgcaaccaaaacgaccgatgtccattcctatcatcccagatattcccatcattgac
gctgaggcacacgatgagtacgagaatttcctgatgtacagctcggatgtcatgcgatca
cccaggcccagcgtctctgacgatacagacatgcagatgaacgggaggtgggagacgaac
acgacgttttccggaggtacccagggcacgatcactcagaacactggcattcacagccag
cagttcacacggaccatcgggggggtctcggagaccctggcgccagggcagggtcagtgg
ttgtctgcacagggaccaccaatgcatggaatgcagggagttgactacacggtcacacaa
cggatgattggcgggaggagacgtacagaatctgaggatgtgaacgctgctcttgagaac
ctggagatggctcttcatgaaaaccgctctccgggggtccccaacaccccgactcgcctg
gtcttctctgcgctgggagcaacctcactgaaggtcagctggcagaaccctccgtgcgaa
cgagaggtcctggcctaccgcgtcacctaccagtccctggcaggaggtgagatgcaaact
gttgacatcccagaccccaatgaaaactcgctgattatcaatgaccttctgcccaactac
tcctacatgttcaaggtcaaggccctgagtgacaagggatggggtccggaccgcgaagga
gtcatcaccatcgaatccaaagtggacccaatgagtcccctcagcccgatcccaggttcg
ccgttcacactgagcacacccagtgcccctgggcccctggtgttcactgcaatcaactcc
gagttgctcaaactgagttgggagaaaccccgaaaaccaaatggagatatcatgggttac
ctggtgacctgtgaacccttgggcgggcaagatgagaccaagacgtatcaagtggaagga
gatgatgcagagatgactctaatggtgccacatctcagcgagaacgttccatacaagttc
aaggttcaagccaagaccacgcagggctttggtccagagcgggaagggatcatcaccatc
gagtctcaggatgcaggaagcatttccaagttcagtaagcagacggtgatgaggaatgaa
gggttcacaatgcctgggaacatgagcacagagaccagcctgatgcagtccaccaccgac
cccttcttctcagacgggatgactgttacaacacaaaggatggaaggagggacgtccgtc
acccagcaggtcactcggaccatgatgaccagtggaaccgtcaccaaacaagttgaaagg
aagttctacgaggcctga
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integrated database retrieval system
