Leucoraja erinaceus (little skate): 129708339
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Entry
129708339 CDS
T09122
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04020
Calcium signaling pathway
leri04080
Neuroactive ligand-receptor interaction
leri04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
129708339
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129708339
04082 Neuroactive ligand signaling
129708339
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
leri04040
]
129708339
Ion channels [BR:
leri04040
]
Ligand-gated channels
Glutamate (ionotropic)
129708339
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
NMDAR2_C
DUF63
Motif
Other DBs
NCBI-GeneID:
129708339
NCBI-ProteinID:
XP_055509994
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All DBs
Position
23:complement(19285646..19349881)
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AA seq
1320 aa
AA seq
DB search
MDQMLKTVVFLYMAESAFAKEPIPPAVNIAVLLGGSWYHMENKGSFNGDIFQDLPVQINT
ITIILNNTNPSSLISNICEVLPKSRIHAIIFEDVIESEAVTLILDFISAHMSVPIIGMNR
GSALVLTPKAHRSAFLQLGASMEHQIGVIFKVMEEYDWGRFAIITSFFPGYLEFLDQIRV
LVDSSNFEWEILQTLTLDMTRDGNNSKTKWLLQQIDAQVLILYCSRQEAEYLFEMADQAD
LLGPTYVWIVSSIAVGNPEQVAKQFPVGLISVMTERWKMSLRQRVLDGIAIIAKSAENFY
NAYGYIPEASGDCMNPIQGDTENILYRPMSNISWGGKEFSFNEDGYLVRPPMVVLKLNSG
RFWERVGNWKDGLIRMKYPVWPRYTAFQEPFFDSDHLTVATLEERPFVIVEEVDSENGAC
VRNTVPCRKQANLSDSIADGYTKLCCKGFCIDILKKLAKTVKFSYDLYLVTNGKHGKIVH
GTWNGMIGEVYYQRADMAIGSLTINEERSAIVSFSVPFVETGISVMVARSNGTVSPSAFL
EPYSPAVWIMMFVMCLMVVALTVCVFEYYSPVGYNRNLQSGKITGGPTFTIGKSVWLLWA
LVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQFIDTVSGLSDRKF
QKPQDQYPAFRFGTVPNGSTERNIKNNYPNMYPYMTRYNQRSVEDALDNLKSGKLDAFIY
DAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKNSKWKRAIDLALLQFLGDGDIHR
LHIVWLTGICEKEKNEAMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHLVK
EAGKTDCLLAVSRGVYSCFSGVHVVPSPLHIASPIISSNFSQADMLKMLQAAKDLASATN
SGSAAEIGTVATDPGAPAGNNISSYLPKGPSQNIKGAYVTDSRLAARGQSARTPSVPRHR
TFVLPPLTAVRTRPVQETGWPDQAVIKYKRRASSNQLIPHPSLPRQLPALSQYGKEFDEG
KNPNIPFIYSHEYLQNIYNRKYFRRRLPLPGRRLPHPAGSVGVQSGPDMVPAQIPCVGMD
ERWLARNLRPSMSYPKQRDHSSCSRCYPGLQPERLPPQTRRSSYIRATKDAEETTRLQVK
LGNFKSRSQGEIAGLFHSCDSEGLEPTGKAPKVREGFPGHREMHSAHSSPRKLKHSLSAR
LPSYKEACLQSSVSLRCASLALQHHSWPRPSLYVWQQRWGSQHHSWLTEPGHWSCDRGVR
MKYLEKKAMHQDSALRQPVGKTFHLGTRAKGSLQLESRRAGDNSPRLRKCARNLSLESEV
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaatgctgaagactgtcgtcttcctgtatatggcagagtccgccttcgccaag
gaacccatcccacctgccgtcaacatagctgttctactcgggggctcctggtaccacatg
gaaaacaagggtagcttcaatggagatatcttccaagacttgcctgtacaaatcaacact
atcacaataatattgaacaacactaatcccagcagcctaatctcaaacatctgtgaggtg
ctgcccaaatccaggatccatgccatcatcttcgaagacgtcattgaatctgaggctgtg
acattaattctggacttcatctctgctcacatgtcagtgccaatcatagggatgaacaga
ggctctgctcttgtgctgactccaaaggcccatcgctctgcattcctccagctgggggct
tccatggaacatcaaattggggtcattttcaaagtaatggaagagtatgactgggggaga
tttgccatcatcaccagcttcttccctggatacttggagtttctggatcagattagggtt
cttgttgatagcagcaattttgaatgggaaattctccagactcttactcttgacatgact
cgagatggcaacaattccaaaacgaaatggcttctccagcagattgatgcacaagttttg
attctgtattgctcgagacaggaagctgagtacctttttgaaatggctgaccaggctgat
ctcctaggcccaacctatgtttggatagtctccagtattgctgttggcaaccccgaacag
gttgcaaaacaattccctgtgggtttaatcagtgtgatgacggagcgatggaagatgagc
ttacggcaaagggtgctggatggcattgcaatcatcgcaaaaagtgcagagaacttttac
aatgcatatggatatattcccgaagcaagtggtgactgcatgaatccaattcaaggggac
acagaaaacatattgtacaggcccatgtcgaatattagctggggaggtaaagaattctct
ttcaatgaggatggatatttggtgagaccaccgatggttgtgttgaagttgaacagtggc
aggttttgggaacgggttgggaattggaaggatgggttgataagaatgaaatatccagtg
tggcccaggtacacggcatttcaggagccttttttcgacagtgatcatctaactgttgcc
acattagaggagagaccatttgtgattgtggaggaagtggattctgaaaatggagcctgt
gtgcggaatacagttccctgccggaagcaagcaaacctcagtgacagcattgctgatgga
tacaccaagttgtgttgtaaaggattctgcattgatatcctgaagaaactcgccaagaca
gtcaagttttcctatgacctttacctcgtgacaaatggaaagcatgggaagattgtacat
ggaacgtggaatggaatgattggagaggtctactaccagcgagcagacatggccatcggc
tccctcaccataaatgaagagcgttctgcgatcgtcagcttttctgttccatttgtggag
actgggattagtgtgatggtcgctcggagcaatgggacagtctccccttcggctttcctt
gaaccttacagccctgcagtgtggataatgatgtttgtgatgtgcctgatggtcgttgct
ctcactgtgtgtgtgttcgagtattacagccctgttggatacaaccgcaaccttcagagt
ggcaagatcacagggggcccaacatttaccatcggcaaatcggtgtggcttctctgggca
ttggtcttcaacaactctgttcctattgaaaatcctaaaggcacaaccagcaaaatcatg
gtcttaatctgggccttcttcgctgtcattttcctggcgagttacacagcaaacctggca
gcgttcatgatccaagagcagtttatcgacacggtctcgggtctcagcgacagaaagttt
cagaaaccccaggatcaatacccagcgttcagatttggcacggtccccaacggcagcact
gagaggaatatcaaaaacaactacccaaacatgtatccctatatgaccagatacaaccag
cgctccgtggaagatgctctggacaacttgaaatcagggaagcttgatgcttttatttac
gatgcagctgttctcaattacatggctgggaaggatgaaggctgcaagctggtgaccatt
ggaagtgggaaagtatttgccaccactggttatgggatcgctctgcaaaaaaattctaaa
tggaagcgggccatcgatctggccctgctacagttcctgggtgatggtgatatacacagg
ctacacattgtctggctgacagggatctgtgagaaggagaagaatgaagcgatgagcagc
aaactggatatcgataacatggctggtgtgttctacatgctgctcgtggccatgggcctc
agcctgctcgtctttgcctgggagcatttggtgtactggaagctgaggcacctcgtgaag
gaagccggcaaaacggattgtctgttggctgtcagcaggggtgtttacagctgtttcagt
ggtgtccatgtggtccccagcccacttcacattgcatctcccatcatttcttccaacttc
tcccaagctgacatgttgaagatgctgcaagcggccaaagacttggcttcggccacaaac
agtggaagtgccgcagagatcggtacagtggcaacggatcctggggcacctgcaggcaat
aacatttccagttaccttcctaaaggcccatcgcagaatatcaaaggtgcatacgtcacc
gacagcagactggctgccaggggacaatcagcccgcaccccctcggtgccaagacatcga
acatttgttttacccccactcactgctgtcaggacacgtcccgtgcaggagacgggctgg
ccagatcaagcagttattaaatacaaacgcagggcaagcagcaatcaacttatcccacat
cctagtcttcctcgtcaactccctgcgctttcccaatacggcaaggaatttgatgaggga
aagaaccctaatatcccatttatttacagtcatgaatatttacagaatatctacaataga
aaatatttcaggaggagacttcccttgcctggcaggaggttaccccacccagcaggaagt
gtgggcgttcagagtgggccagatatggtgcctgcccaaataccttgcgttggaatggat
gagagatggcttgcaagaaatcttcgcccttcaatgtcgtatcccaagcagcgagaccac
agctcctgcagcaggtgttaccctgggctacagccagagagattacccccgcagaccagg
cgatcgtcatatattagagcaacaaaagacgcggaggaaaccacaagacttcaggtcaaa
ttaggaaactttaagtcaagatcacaaggagaaattgctggcttattccacagctgtgac
agtgaggggctggaacccactgggaaagctcccaaggtgagggaaggattcccaggccac
agggaaatgcactcagcacacagttcacccaggaagctcaagcactcgctgtctgctagg
ctcccctcctacaaagaggcctgcctgcaaagctcagtgagcctgagatgtgcctccctt
gcgctgcagcaccattcatggcccaggccctcactgtacgtctggcagcaaaggtggggc
tcgcaacatcacagctggttgactgagcctggccattggtcctgtgacagaggcgttcgc
atgaagtatttggaaaaaaaggctatgcaccaggacagcgctctgagacagcccgtaggc
aagaccttccatcttggaacacgggccaagggcagccttcagctggagtctaggagagca
ggcgacaattcccctcgtttgagaaaatgtgcaaggaatttaagcttggaatcggaggta
tag
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