Leucoraja erinaceus (little skate): 129708351
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Entry
129708351 CDS
T09122
Symbol
gga3b
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA3 isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129708351 (gga3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129708351 (gga3b)
Membrane trafficking [BR:
leri04131
]
Endosome - Golgi transport
Others
GGA
129708351 (gga3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
DUF2096_N
SesA
Motif
Other DBs
NCBI-GeneID:
129708351
NCBI-ProteinID:
XP_055510010
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All DBs
Position
23:complement(19649540..19680542)
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AA seq
722 aa
AA seq
DB search
MAEADGETLESWLNKATNPANRQEDWEYIIGFCDQVNKELEGPQIAVRLLAHKIQSPQEW
EAVQALTVLEASMKNCGQRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLFS
WTVALPEETKVKEAYQMLKKQGILHQDPQIPIDKTLIPSPTARSKNTVFEDNEKSKLLAR
LLKSRKPEDLQEANKLIKNMVKEDEARMQKITKRMNTLEEVNNNVRLLNEMLAHYCKDDS
TEGDKELMMELYDQCEKMRRALFKIASETEDNDNSLGDILQASDDLSRTINSYKKIVQGQ
TVNGELSLPEPPKPPVRSGTSDTGTLIDLVELDVPSAKTVPIPVPIFPIIPPPPNVTGDS
GSRLLGLSSVNKQPPSATSAIDLLDVELLSLGLNDPPSFNGIDKDPGEPQLKSFLIDNTV
LNPFTVPPAPAGSSSCTNPLVQSEARLLQQPPPPSLLVMPGASHLPHAPAVPLSVKAAAR
SSPAAMLPAPHLVSMFAGEPLQSGSSSPVMFSSSIFNINTFDQKHREELRGASRVMGIMA
GASGGSGQCTPTAAPGSPLFRSLSPLPLSPLRTGLPEVSLANVLVPLETIKPSGILPVTA
YDKSGFRILLHFAKDCPPTRPDVLVVVISMINTSPLPVTNIVLQAAVPKTMKVKLQPPSG
TELAPFNPILPPAAITQVMLLANPLKEKVRLRYKLTFALGHQACSELAEVDQFPPAENWG
NL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcggacggggagacgctggagtcctggctgaataaagccactaatcctgca
aatcggcaggaagattgggagtacatcattggcttctgtgaccaggtcaataaggagctg
gaagggccacagattgctgtcaggctgctggctcataaaatccagtctccacaggagtgg
gaggcagtacaagccctcaccgtcttggaagcttctatgaagaactgtggacagagattt
cacaatgaagttgggaaattccgattcctgaatgaactaatcaaagtggtatctccgaag
tatttgggagacagagtatctgaaaaagtcaagactaaagtcattgaattgctcttcagc
tggacagtcgccctcccagaggaaaccaaagtcaaagaggcttatcaaatgttaaagaaa
caaggtattttgcatcaagatcctcagatccccattgataaaactctgattccttcacca
accgcacgttccaaaaatacagtctttgaagataatgaaaagtctaagctattagccagg
ttactgaaaagcagaaagcccgaggatctccaggaggccaataaactgataaagaacatg
gtgaaggaggatgaagctcgaatgcagaaaataacaaaacgcatgaacactctggaggag
gtgaacaataatgttcgtcttttgaatgaaatgttggcccattactgcaaggatgattca
acagaaggggacaaagagttgatgatggagctatacgaccaatgtgagaaaatgaggcgg
gcgttgttcaaaattgcgagtgagacggaggacaatgacaacagcttaggtgatattcta
caagcaagcgatgacctttcacgtactataaactcctacaagaagattgttcaaggacag
actgtaaatggagaactcagtttgcccgaacctccgaagccaccagtccgtagtggaacc
agtgatacaggaacactgatcgacttggtggagttagatgtgccctctgcaaagacggtt
cccattccagtaccgatattccccatcattcctcctccgccaaacgtcacgggtgattct
ggctctcgcttgctcggcctgtcaagtgtgaacaagcaacctcccagcgcgaccagtgcc
attgacctgctggatgtggagctgctttcactgggtttgaatgatcctccatcgtttaat
ggtatcgacaaggaccctggggaacctcagctgaaaagttttctgattgacaacactgtt
ctcaaccccttcaccgtgcccccagctccggctgggtccagctcctgcaccaatcctctt
gtgcagtcggaagctcgtctccttcagcagccccctcctccgtcactcctggtgatgccc
ggagcttcacatctcccacacgccccggctgtgcctctctcagtaaaagctgccgctcga
tccagcccggctgccatgttgccagcacctcacttggtctccatgtttgcgggagaacct
ctgcaatcgggttcctcctccccggtaatgtttagcagcagcatcttcaacatcaacacg
tttgatcagaagcaccgagaagagctcagaggtgcttctcgtgtgatgggtatcatggct
ggggcatcgggaggcagtggccaatgcacacctactgcagcaccgggcagccccctgttc
cgctccctctcccctctgccgctcagtcctctccggactggattgccagaagtatcactt
gccaacgtgttagttccactggagacgattaaaccaagcggtattctcccagtgactgca
tacgacaagagtggcttcaggatcctgctgcactttgcgaaggactgtcctcccacacgg
ccagatgtgctggttgtggtcatttccatgatcaacacctcacccctgcccgtcaccaac
atcgtgcttcaggcagcagtgcccaagacaatgaaagtcaagttacagcctccatctggg
accgagttggctccgtttaatcctatcctgcctccagctgcgatcacacaagttatgtta
ctggcaaatcctttgaaggagaaggtgcggctgaggtacaagctgacatttgcactggga
catcaggcctgctcggagcttgctgaagtggaccagttccctccagctgagaattgggga
aacctctga
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