Leucoraja erinacea (little skate): 129708386
Help
Entry
129708386 CDS
T09122
Name
(RefSeq) rhomboid-related protein 3-like
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
leri01002
]
129708386
Enzymes [BR:
leri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
129708386
Peptidases and inhibitors [BR:
leri01002
]
Serine peptidases
Family S54: Rhomboid family
129708386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
AIF-1
EF-hand_11
Motif
Other DBs
NCBI-GeneID:
129708386
NCBI-ProteinID:
XP_055510071
LinkDB
All DBs
Position
23:33392596..33424289
Genome browser
AA seq
432 aa
AA seq
DB search
MEESERRGGKPRPQRGVEAGTGRGMPLGTEDHWKVLFDQFDPGNTGYISTEAFRGLLQSR
GSELEAHKLQVLLALADDSPQGRVCYQDFVNLMSNKRSSSFRRAVQRGKGRGGSDSLLEE
RGLSLGRRLVRHVAYETLPRHADRRWYYDTYTCCPPPWFIITITLLEASSHAVAAEAGHS
AHRDRSAIHSWLTYDPRVVNLWNSLPQKVVSGYIYYGQGTGLCRCDPIVRGAARAPATHT
AGIAWLGFVHVVEQLGFSVTLQLLVGVPLEMVHGALRIGFIYVTGALAGSLATSVADMTA
PAFGSSGGVYALVSAHLANVAMNWSGMRCQFKLFRMGIAMICMSLEFGRAVWLRFRPPAH
PSCAHPSFACHLGGVMVGITLGVVILKNYEQKLHEQSLWWIFVIVYLIFVSFAVLWNIFA
YGLLDSRLLPPV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagcgagagacgaggcgggaaaccgcggccacaacgtggagtggaagcggga
accggccggggaatgcccttgggcactgaggatcattggaaagtcctctttgaccaattt
gaccccggcaacacgggctacatcagcacggaggcattccgtggcctcctgcagtctcga
ggctcggagctggaggcccacaagctgcaggttctgctggccctggctgatgacagcccc
cagggcagggtctgctaccaggactttgtcaacttgatgagcaacaagcgctccagcagt
ttccgccgtgccgtgcagcgggggaaggggagaggtggctccgactcgctgctggaggag
cgggggctgagcctgggccggcggctagtccgacacgtggcgtacgagaccctgcctcga
cacgcagaccgtcgctggtactacgacacttacacctgctgcccgccgccctggttcatc
atcaccatcaccctcctggaggcaagttcacacgctgtagcagctgaagcaggccattcg
gcccatcgagaccgctctgccattcattcgtggctgacctatgatccaagggtggtgaat
ctgtggaattctttgccacagaaggtcgtcagtggatatatttactacgggcagggcaca
ggcctttgcaggtgcgacccaatcgtacgaggagcggcccgggccccagctacgcacaca
gctggcatcgcctggctgggcttcgtgcacgtggtggagcagctggggttcagtgtgacg
ctgcagctcctggtgggggtgccgctggagatggttcacggcgctctccgcatcggcttc
atctacgtcaccggagccctggcaggttcactggctacatcggtagcagacatgacggcc
ccggcattcgggtcctctggaggagtctacgccctcgtctctgcacatctggccaacgtc
gccatgaattggtccggaatgagatgtcagttcaagcttttccggatgggaatagccatg
atctgtatgagcctggagtttggccgtgcggtctggttgcggtttcgcccgcccgcccac
ccatcctgtgcccaccccagcttcgcctgccacctggggggggtgatggtgggcatcacc
ctgggggtggtgatcctcaagaactacgagcagaaactccacgagcagtccctctggtgg
atctttgtcatcgtctatctcatcttcgtgtcctttgccgtcctgtggaacatctttgcc
tatggtctcctggacagccggctgctccctccagtctag
DBGET
integrated database retrieval system
