Leucoraja erinaceus (little skate): 129708830
Help
Entry
129708830 CDS
T09122
Name
(RefSeq) sphingomyelin phosphodiesterase 2-like
KO
K12351
sphingomyelin phosphodiesterase 2 [EC:
3.1.4.12
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri00600
Sphingolipid metabolism
leri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
129708830
Enzymes [BR:
leri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
129708830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Phage_holin_3_6
Claudin_2
SK_channel
OppC_N
Motif
Other DBs
NCBI-GeneID:
129708830
NCBI-ProteinID:
XP_055510823
LinkDB
All DBs
Position
24:25046910..25070729
Genome browser
AA seq
410 aa
AA seq
DB search
MSESLAARFRVFTLNCWGIRYLSKHCRERYEMIVQLLSQEKYDVVLLQEVWSEQDYHFLR
SKLTSAQPYSVYFRSGAIGSGLCVFSRYRITDSFLYRYSLNGYPYKLHHGDWFGGKSVGL
VILKVQGIIVHVYVTHLHAEYCREKDDYLPHRLLQSWELGQFIRHTGKTADVTILGGDLN
MHPNDLGNRLLQCYTGMKDSFVETKKFEGSEGGCTLQAQNCYATVWDCPSFPSGIRIDYV
LYKGSRGFPVKCEHLMTTSGTAPGKNIPYSDHEAVCATLSVQKDEGAATGAKREEETNPQ
LVDILNEARAEVKIGIHGAERIRYSSGRMAVLGFVLLLLEVVMAIIPLVTTTAENSFPKV
SFYILGMVAFAVTLLAGILYVFHTIEVKMLQGTEDQMRNTIQALQEQLGE
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtcgctggctgcaaggttcagagtgttcactctcaattgctgggggatccgc
tacctcagcaaacattgcagggagcgctatgaaatgattgtgcagttactgagtcaggag
aagtatgatgtggtcctcctgcaggaggtgtggagtgagcaagattaccactttttaaga
agcaagttgacaagtgcccagccatattccgtgtacttcagaagtggcgctataggaagc
ggactgtgtgtcttctccaggtacagaataactgactctttcctctaccgctactccctg
aatggctatccttataagttgcaccatggcgactggtttggtgggaagtctgttggcctg
gtcattctgaaggtgcaaggcatcattgtccatgtttatgtgactcatcttcacgcagag
tattgcagggaaaaggacgactatctcccccaccgtctgcttcagtcttgggagctgggg
cagttcatacgccacacaggaaaaacagctgacgtcacaatcttgggtggagacctgaac
atgcatcccaatgacctgggaaaccggctcttgcagtgttacacggggatgaaggactca
tttgtggagaccaaaaagtttgaaggctctgaaggaggttgcaccctgcaggctcagaac
tgctatgccacggtttgggattgtccttcgtttccctcgggcattcgcattgactacgtt
ctctacaagggatcgagggggttccctgtgaaatgtgagcacttgatgaccacaagtggt
acggctccagggaaaaacattccatattcagaccatgaagctgtgtgcgccacgctgagc
gtgcagaaagatgagggtgctgccactggggcgaaacgcgaagaagagacgaacccacag
ctggtggacatcctgaacgaagctcgggcagaagtgaagattggcattcacggggcggag
aggatacgctactcctctggcaggatggccgtcctgggatttgtcttgctgctgctcgaa
gtcgtcatggcgatcataccactggtcaccaccaccgctgagaactccttccccaaggtc
tccttctacatcctgggcatggtggcatttgccgtgacgttgctggctggaatcctgtac
gtatttcatacgattgaggtgaaaatgttgcaaggaacggaggaccaaatgcggaatacc
attcaggctctgcaagagcagctgggggagtga
DBGET
integrated database retrieval system
