Leucoraja erinacea (little skate): 129708949
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Entry
129708949 CDS
T09122
Name
(RefSeq) sortilin-like
KO
K12388
sortilin
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129708949
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GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Motif
Other DBs
NCBI-GeneID:
129708949
NCBI-ProteinID:
XP_055511001
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Position
24:complement(32275816..32323575)
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AA seq
781 aa
AA seq
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MKAPPLLAAWTLLVAALALLALRLPSGVTATAGGGACQRGTNFQGDLIKHTHEYRFVDLS
GTVTLAWVGDGTGVLLALTTFRVPFLGIKFGQSRLYRSDNYGKNFSDITKYINNTFIRTE
FGIAIGPENSGKVILTADVSGKSSGGRIFRSSDLGKNFIPTNLPFHPLLQILYHSTDSEH
LLALSIYNVLWFSSDFGESWKKIHDFVCLVKWGPNNTIFFTTHLNGSCTARGLLELRRTD
DFGSTIKILASKIYSFGLGGCFLFASVMTNKGSLRALHVSKDMGDTWNMAQLPHVSAEQF
YSILAANDDMVFMHVDDPGDTGFGTIYASDDRGIVYSKSLERHLYTTTGGETDFTNITSL
RGVYVSSVLAEDGSVQSVITFDRGGEWQPLRKPEDSDCDSTAKNKDECSLHIHASYSISQ
KLNVPMPPLSEPNAVGLIIAHGSVGDAISVLVPDVYVSDDGGYSWFKALKGPHYYAILDS
GGLIVAVEHTVYKGVDEIKFSIDEGQCWYSYQFTKQPIVFTGLASEPGAKSMNVSIWGYV
DLIITQYWVSFTIDFEELLTRDCSDDDYIQWLAHSSNVNDPNDGCMLGYKEKFRRLRKSS
ICRNGHDYVVNKQPNVCLCTLGDYLCDFGYYRKENSLECIEQSDLRGHDLEFCLQGKKEI
LKTNGYRKIPGDQCSGGVKVDRTVKDISKKCVSNLIEPMELLDAHSTSSLPIIVTVIAFL
LILIIVGVVVIKKYVCGGRFLVHRYSVLQRQVEATADDELDTSVPVNKPEFHDDSDEDLL
E
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaccgccgctgttggcggcctggacgctgctggtcgccgccctcgccctcctc
gccctccggctgcccagcggggtcacagcgacggccggcgggggcgcctgtcaacggggc
accaacttccagggcgacctgatcaagcacacgcacgagtaccggtttgtggatctgagt
ggaactgtgacgttggcatgggtcggcgatggaactggtgtgctcttagcattaaccaca
tttcgggtgcccttcttgggaattaaatttggacagtcacggctgtacagaagcgataat
tacgggaagaacttctctgatattacaaaatacatcaacaatactttcattcgcactgaa
tttggaattgctattggtcctgaaaactctggaaaggtgatccttacagctgatgtgtct
ggaaagagcagtggaggaagaatattcagatcaagtgacttaggaaagaattttatcccc
acaaaccttcctttccacccactgttgcaaatcctttatcattcaacggattcagaacat
ctgctggcattaagcatatacaacgtgttgtggttttcctctgattttggtgaatcgtgg
aaaaagattcatgactttgtgtgtcttgttaagtggggaccaaataatacaattttcttc
actacccatctgaatggatcttgcactgcaaggggcttgttggagcttagaagaacggat
gattttggaagtacaatcaagatacttgcatcaaaaatttactcatttggactaggaggg
tgtttcctcttcgcttcagttatgacaaacaagggcagtctaagggccctccatgtatcc
aaggatatgggagacacctggaatatggcgcagttgccgcacgtaagcgctgaacagttc
tactccattctggctgctaacgatgacatggtatttatgcatgtcgacgatcctggtgac
acgggctttggcaccatttacgcttcagatgatcgtggaatagtgtattcgaaatctctt
gagagacacttgtacacaacgacaggaggcgagaccgatttcacaaatattacttcactg
cgtggcgtgtacgttagtagcgtgctagcggaagatggttctgttcagtctgtcattacg
tttgacagaggcggagagtggcagcccttgagaaaaccagaggacagtgactgtgactca
actgccaaaaataaggatgagtgtagtctgcatatccatgcatcctacagcatctcacag
aaactcaacgtgccaatgcctccgttgtctgaacccaatgctgtcggtttgatcatagca
cacgggagtgttggggatgccatctcggtattggtcccagacgtgtacgtgtctgatgat
ggtggctactcttggtttaaggctctaaagggaccccattactacgccattctggactct
gggggcttgatagttgccgtggagcacactgtatacaaaggtgttgatgaaataaagttt
tcaattgatgaaggccagtgctggtattcctatcagttcaccaagcaaccaattgtcttc
actggccttgcatcagaaccaggagctaagtcaatgaacgtcagcatctggggatatgtg
gacctcatcattacacaatactgggtatctttcaccatcgactttgaagagctccttaca
agagattgttctgatgatgactacatccaatggcttgctcattccagtaacgttaacgac
cctaacgatggctgcatgttgggttacaaggagaaattccgtcgcttgaggaagtcctcc
atctgccgcaacgggcacgactatgtcgtcaacaagcagcccaatgtctgtctctgcacc
ctgggcgactatctgtgtgattttggatactatcgaaaggagaatagtctggaatgcata
gaacagtcggatctacgaggccacgacctggagttctgcttacaaggaaagaaagaaata
ttgaagaccaatggataccggaagattcctggagaccagtgttccggaggcgtgaaagtg
gatcgcactgtgaaagatatcagcaagaagtgtgtcagtaacttgatcgaaccgatggaa
ctgctcgatgcacacagcactagctctctgccaatcattgtcacggttatagcatttttg
ctgattctgatcatcgttggagtggtcgtcattaagaaatatgtatgtggtggacgattt
ttggtgcatcggtactcggtcctacagcggcaggtggaggcaactgctgatgatgaactg
gacacatctgtacccgtcaataaaccagagttccacgatgactccgacgaggatcttctg
gagtag
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