Leucoraja erinaceus (little skate): 129709057
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Entry
129709057 CDS
T09122
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129709057 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129709057 (ppil2)
03110 Chaperones and folding catalysts [BR:
leri03110
]
129709057 (ppil2)
04121 Ubiquitin system [BR:
leri04121
]
129709057 (ppil2)
Enzymes [BR:
leri01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
129709057 (ppil2)
Spliceosome [BR:
leri03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
129709057 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
129709057 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
129709057 (ppil2)
Chaperones and folding catalysts [BR:
leri03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
129709057 (ppil2)
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
U-box type E3
129709057 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
zf-NOSIP
Rtf2
U-box
Motif
Other DBs
NCBI-GeneID:
129709057
NCBI-ProteinID:
XP_055511129
LinkDB
All DBs
Position
25:complement(22043247..22205808)
Genome browser
AA seq
523 aa
AA seq
DB search
MGKRQHQKDKMYITCTEYTNFYGGKKTVIPQANFRRLPFDHCSLSLQPFEYPVCTPDGMV
FDLLSIIPWIKKFGTHPTTGEKLDVKSLIKLNYHKNSEGKFHCPVMYSVFTNNSHILAIK
TSGNVYSHEAVEQLNIKTKSFKDLLSDEPFTRQEILTLQDPSNVDKFNVSNFFHVKSGQR
VTDPDEEKAKLDPNYYLKSTSMELRETLTELYRDYKGDEMLASIMKEPAKKKVDKINAAH
YSTGKVSASFTSTAVSPETTHEAAAIDDDQVRYRYVKKKGYVRLHTTKGDLNLELHCEMT
PKACENFIKLCKKGYYNGTKFHRSIRNFMIQGGDPTGTGTGGESYWGKPFKDEFKPNLSH
TGRGILSMANSGPNTNKSQFFITFRSCAYLDKKHSIFGKVVGGFETLTAMENVESDVKTD
LPEEEIRIENTAVFVDPFEEADLLIAAEREKNRIEEEEAKAKAKPVVPKSSATPKTYRQG
VGKYINMGAKAKKRTVEDQDSSPSTSSTKKTKGITGFGNFSSW
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaggcagcatcagaaggataagatgtacatcacttgtacagagtatactaac
ttctatggtggcaagaaaacagttattccacaagccaacttccgccgtttaccttttgat
cactgcagtttgtcccttcaaccctttgagtacccagtgtgtacacctgatggaatggtg
ttcgatctcctgtccatcattccatggataaagaaatttggaacccatccaaccactggt
gagaaattggatgttaaatcactcattaagttgaactaccataaaaacagtgaaggaaaa
ttccattgcccagtgatgtactctgtcttcacaaacaactcgcatatattggcaatcaag
acttcaggaaatgtctattcacatgaggcagtggagcagttgaatattaagaccaagagt
tttaaagatctgctaagtgatgagccttttactcggcaagaaatcctcacattgcaagat
ccatccaacgtggacaagtttaatgtctcaaactttttccatgtcaaaagtggccaaagg
gttactgatccagatgaggagaaagcaaagttagacccaaattactatctcaaatccacc
agtatggagctgagggaaacgctgactgaactgtacagagattataaaggtgatgaaatg
ctggcatctatcatgaaagaaccagcaaaaaagaaagtggataaaataaatgcggcacat
tattctacaggaaaagtctcagcttccttcacatccacagcagtgagtcctgaaactaca
catgaagcagctgcaattgatgatgaccaggttcgttaccgctatgtcaaaaagaaagga
tatgtccgactccatacaaccaaaggcgatctgaacttggagttgcattgtgaaatgact
cccaaggcatgtgagaatttcatcaaattgtgcaaaaagggatattacaatggaacaaaa
tttcacagatctatccggaacttcatgattcaaggaggtgatccaactggtaccggcact
ggtggagagtcatactgggggaaacctttcaaggatgagttcaaacccaatctctcgcac
actggtcgaggcatcctcagtatggccaattcaggacccaacaccaataaatcgcaattc
tttattacatttcgctcatgtgcctacctggacaaaaagcactcaatcttcggaaaagtt
gttggtggttttgagacattgacggccatggaaaatgtggagagtgatgtgaagactgac
ttgccagaggaagagatcagaattgagaacacagcagtgtttgtggatccctttgaagaa
gcagatcttctgattgcagcagagagggagaaaaatcggattgaggaagaggaagcaaag
gccaaagcaaagccagttgtgcctaaaagcagcgcaaccccaaaaacctaccgacaagga
gttggaaaatatatcaacatgggagcaaaggctaaaaaacggacagtggaggatcaggac
agcagcccttccaccagcagtaccaagaaaacaaaagggatcactggctttggtaacttt
agctcgtggtag
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