Leucoraja erinaceus (little skate): 129709165
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Entry
129709165 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: sodium- and chloride-dependent GABA transporter 1-like
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
leri02000
]
129709165
Transporters [BR:
leri02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
129709165
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
129709165
NCBI-ProteinID:
XP_055511297
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Position
25:complement(26547311..26603496)
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AA seq
626 aa
AA seq
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MGVGAQTAQDGLLSPSAAQEQKARVESEWGAEAPGKEVGSGQLRVRETWSRRLEFTLACV
GYAVGLGNVWRFPYLCYRSGGGAFIIPYLVMVLLCGIPLLLMEYTIGQYTSLGPVHALAR
ICPLLKGVGVATVVISFLLCTYYNVIITWALYYLFNSFRATFPWQSCNNTWNVVENCSDG
FARNATHLKSASQQFFDYRLLGMSSGIEQPGNMQWNLFGLLILSWDYFCIFLXAQNAGVI
SCRLSSQVVYFTAIFPYIILMILLINNVQLPGAKDGILFFLTPDWSKLLDVQVWVNAAAQ
IFNSLGIGFGSMISMASYNKFNNNILRDTFIVAVINSVTSIFAGLVIFSAIGYMSHLHNL
PVEDIATDGPGLVFVVYPEAFVTMPIAPMWASLFFFMLLCLGVDSQFAMVEVMVVSLMDN
WGTSLLQFFRRKELVVLAVCCVAFLLGIPNVTQGGIYFFQLMDHYTAVVSLMFLAFFEVL
AVCWFYGVRRLSANYKEMLGTEPNFFFKLCWWVVSPLLVTVILVSSIVRYSPARYGQTYK
YPPWAEGLGWIISLCSIIWIPLAAVHTLYTSKGSFIQRLRSSITPIGEMAAAGSKEPAIK
LKLEMYEPPCSISFTDNMKLAEESNM
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcggggctcagaccgcgcaggacgggctgctgtcgccgtccgctgcccaggag
cagaaagcaagagtggagagcgagtggggagccgaggctccgggcaaggaggtcggatcc
ggccagctgcgggtcagggagacatggagtcgccggctggagttcaccttggcctgtgtc
ggctacgcggtgggactgggcaacgtgtggaggttcccctatctgtgttatcgaagcggc
ggaggtgccttcattatcccatacctggtcatggtcttgttgtgtgggatcccgctgctt
ctcatggaatacaccatcggacagtacacgagcttggggcctgtccacgccttggctaga
atctgccctctcctcaaaggtgtcggcgtggcaacggttgtcatttcattcttgctttgt
acttattacaatgttataatcacgtgggctctgtactacctcttcaactccttccgggcc
acatttccctggcaaagctgcaacaacacgtggaacgtggtggaaaattgctcggatgga
tttgctaggaacgccacccatctcaaatccgccagtcagcagttttttgattacaggttg
ctggggatgagcagtgggatcgagcagccaggcaacatgcagtggaacctgtttggcctt
ctgatcttatcttgggattatttctgtatatttctgtaggcacaaaatgctggagtaatc
tcttgtcgtctctcttcccaggtggtgtatttcacagccatatttccgtacatcatctta
atgatcctgctgatcaataatgtccagcttccaggagccaaggatgggattctcttcttc
ctcacgcccgactggagcaagctgctggatgtccaggtctgggtgaatgctgccgcacag
atttttaactcgcttggaatcggatttggctccatgatatccatggccagttacaacaaa
ttcaataacaacatcctcagggatacattcattgtggcagtgataaactcggtcacaagt
atctttgcaggattagtgattttctctgccattgggtacatgagccacctgcacaattta
cctgttgaagacattgccactgatggcccgggcctagtgtttgtcgtgtatccggaggcc
tttgtaaccatgccaattgccccaatgtgggccagtctgttcttcttcatgctcctctgc
ctgggagtggacagccagttcgccatggtggaggtgatggtggtcagtctgatggacaat
tgggggacgagtctgctgcaatttttcagacgcaaagaactcgtggttcttgctgtgtgt
tgtgtggcctttttgcttggaattcccaacgtcacacagggcggaatttatttcttccaa
ctaatggatcattacacagccgtggtgtcactcatgttcctggctttctttgaagttttg
gccgtttgttggttctatggtgttcgtagattatctgccaactacaaggagatgttggga
actgaaccaaatttctttttcaagctgtgctggtgggttgtctctccactgctggtcaca
gttatcctggtgtccagcatagtccgctacagtcctgcccgatacggtcaaacatacaag
taccccccttgggctgagggcctcggctggatcatctccctctgttccatcatctggatc
ccactggcagctgtgcacaccctgtacaccagcaaaggctcatttattcagcgtctgaga
tcttcgataactcccatcggtgagatggcagcagcaggaagcaaggagccggcgatcaaa
ttgaagctagaaatgtacgagcctccgtgttccatcagcttcactgacaacatgaagctt
gctgaagaaagcaacatgtga
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