Leucoraja erinaceus (little skate): 129709192
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Entry
129709192 CDS
T09122
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30-like isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129709192
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
leri01002
]
129709192
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129709192
04121 Ubiquitin system [BR:
leri04121
]
129709192
Enzymes [BR:
leri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129709192
Peptidases and inhibitors [BR:
leri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129709192
Membrane trafficking [BR:
leri04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
129709192
Ubiquitin system [BR:
leri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129709192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
PPV_E2_C
Motif
Other DBs
NCBI-GeneID:
129709192
NCBI-ProteinID:
XP_055511350
LinkDB
All DBs
Position
25:complement(28162748..28178946)
Genome browser
AA seq
488 aa
AA seq
DB search
MRRGRMLRNWGVIGGIAAALAASIYVLWGPITDRKKRRRGLVPGLLNLGNTCFMNSLLQG
LSACPSFVRWLGDFTTRYRLDASLEERSPYLSVTLHRLLRAVLSGTGETSEDVVDAGSLL
EVLRMYKWQMSSFEEQDAHELFHVLTSALEDERDRQPQVAHLFDVHSLETPPASEGSQPS
CRSRGPLLLPPSPWKSQHPFHGRLTSNMVCKQCEQQSPVRYDTFDSLSLTIPAVTWGRPV
TLDLCLQHFISTESIKDVTCENCSKVEGKQSGWIPGSHRTTFIKQLKIGKLPQCLCIHLQ
RLSWSSQGSPLKRNEHVQFSEFLSLDAYKYRGPAWRRHGQRRLSRAASTGSLPCMLEAAL
LSKPGSTLPSLAKMPMANGACSSSLLSSLTTTPSIGTASYSSPVYSFRLMSVVVHHGDVH
SGHFVTYRRSPSTSKNPLALSSQWTWISDDTVRRASLQEVQASNAYLLFYERVPPLARHA
SRELVLGK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagaggcagaatgctgaggaactggggtgtcatcggggggattgccgccgccctg
gcagcgagtatctacgtgttgtgggggccgattaccgataggaagaagcgccggagaggg
ctggtccccggcctcctcaacctgggcaacacctgcttcatgaactccctgctgcagggg
ctgtccgcctgcccctccttcgtccgctggctcggggacttcaccactcgctaccgtctg
gacgcttccctggaggaacgcagcccctacctctccgtcaccctccaccgattactccga
gcagtattatccggcaccggcgagacgtcggaggacgtggtggatgcggggagcctcctg
gaggtgttgcggatgtacaagtggcaaatgtcgtccttcgaagagcaggatgcccacgag
ctgttccacgtgctcacctcggccctggaggatgagcgggaccgccagccacaagtcgcc
cacctgttcgatgttcactctctggagaccccaccagcatcagagggcagccagcccagc
tgcaggagccggggtcctctgctgctgccaccgagcccgtggaaatcccagcaccctttc
catggtcggctaaccagtaacatggtgtgtaaacagtgtgaacagcagagtcctgtccga
tacgacacgttcgacagcctctccctcaccattcccgcggtgacctggggtcgacccgtg
acgctggatctttgtctacaacacttcatctctacagagtccatcaaggacgtgacgtgt
gagaactgcagcaaggtcgaggggaagcagagtggttggattccaggaagccatcggaca
accttcatcaaacagctgaagatcggcaagctcccgcagtgcctgtgcatccacctgcaa
cgactgtcctggtccagccaggggagccctctgaagcgcaacgagcacgtgcagttcagc
gagttcctctcgctcgacgcctacaagtaccgcgggccggcgtggcggcggcacgggcag
cggcggctgagccgagcggccagcaccggcagtctgccgtgtatgctggaggcagccctg
ctgagcaaaccagggtcaactctacccagccttgctaaaatgcccatggcaaatggagca
tgttcatcatccctgctgtcatctttaaccactacaccgtccattggcactgcaagttac
tcgtcgccggtgtactcgttccgcctgatgtcggtggtggtccaccacggggacgtccac
tcgggtcactttgtcacctaccgccgctcgccctccacctccaagaacccgctggcgctg
agcagccagtggacctggatctcggacgacaccgtgcgcagggccagcctgcaggaggtg
caagcctccaacgcctacctcctcttctacgagcgggtcccgcctctggcccggcacgcc
agccgcgagctcgtactgggcaagtaa
DBGET
integrated database retrieval system
