Leucoraja erinacea (little skate): 129709218
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Entry
129709218 CDS
T09122
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04142
Lysosome
leri04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129709218 (cltcl1)
04142 Lysosome
129709218 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129709218 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
leri04147
]
129709218 (cltcl1)
Membrane trafficking [BR:
leri04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
129709218 (cltcl1)
Exosome [BR:
leri04147
]
Exosomal proteins
Proteins found in most exosomes
129709218 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Coatomer_WDAD
Vps8
DUF1869
Motif
Other DBs
NCBI-GeneID:
129709218
NCBI-ProteinID:
XP_055511391
LinkDB
All DBs
Position
25:complement(29955499..30043608)
Genome browser
AA seq
1678 aa
AA seq
DB search
MAQILPIRFQEHLQLQNQGVNPANIGFSTLTMESDKFICIREKVGDQAQVVVIDLNDPTN
PIRRPISADSVIMNPASKVIALKAGKTLQIFNIEMKSKVKAHTMAEEVTFWKWISLNTVA
LVTETAVFHWSMEGDSHPQKMFDRHASLAGCQVINYRTDLQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFADFKLEENPLPSTLFCFAVRSQAGGKLHIIEVGQPAAGN
QPFTKRAVDVFFPPEAQTDFPVAMQIGAKYGVIYLITKYGYIHLYDLESGACIYMNRISA
ETIFVTAPHEPTSGIIGVNKKGQVLSVCVEEENIVNYTTNVLQNPDLALRMAVRSNLAGA
EELFARKFNTLFAQGNYAEAAKVAASAPKGILRTPDTIRKFQTVPAQPGQASPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAADPTLALSVYL
RASVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVSPDQGLQFAQMLVQDE
EPLANISQIVDIFMENNLIQQCTSFLLDALKNNRPSEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNYFGALSV
EDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDSDRVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEEVIKNLINVVRGQF
STDELVGEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSSVVGKYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRRDPELWASVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNNVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEV
VKAANKNNNWEDLVKFLQMAKKKAKESYVETELIFALAKTNRLSELEEFVNGPNNAHIQQ
VGDRCYDDGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFAC
VDGQEFRLAQICGMHIVIHADELEELIIYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAVITMMS
RPTDAWKEGLYKDIIAKVANVELYYKALQFYLDFKPLLINDLLMVLSPRLDHTRAVTFFS
KVDQLQLIKPYLRSVQNHNNKSVNEALNNLLTEEEDYQGLRTSIDAYDNFDNITLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDTELSEKLLQWFLEE
GKQECFASCLFTCYDLLRPDVVLELSWRHNIMDFAMPYFIQVMREYLSKVDELMEKVDKL
DASDNLRKDEEQVTEPAPLAFGQHLMLTSGSTPVPPQPAYAYGYPAGYPAQPAYGFNM
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagatcctgcctatccgcttccaggagcacctgcagctccagaaccaaggagtg
aaccctgccaacatcgggttcagcaccctgactatggagtcggacaagttcatctgcatc
agggagaaggtgggagaccaggcccaggtggtcgtcattgacctgaatgacccaacaaat
ccaatccgacgacctatatctgctgacagcgtcatcatgaacccagcgagtaaagtgatc
gctctgaaagctggaaaaacactacagatatttaacattgagatgaagagcaaagtcaag
gcccacaccatggctgaagaagtgacgttctggaagtggatctccttgaacacagttgcc
ctagttaccgagactgccgtcttccactggagcatggaaggtgactctcacccacagaag
atgtttgacaggcacgccagcctagccggctgtcaggtcattaactaccgcacagacctt
cagcagaagtggctgctgctcattggaatctcagcgcagcaaaaccgagtggttggtgcg
atgcagctctattctgtggaccggaaggtatcgcagccgattgaaggccatgcggctgct
tttgctgacttcaagctggaagagaatcctttgccatcaaccctattttgctttgcggtt
cgcagtcaagccggggggaagctgcacataatagaagtaggtcagcctgctgctggaaat
cagcccttcaccaagagagcggtggacgtgttctttcctcccgaggctcaaaccgacttc
ccagtggcaatgcagattggagctaaatatggcgttatatatctgattacaaaatatggg
tacatccacttgtatgacctggagtctggtgcctgcatctacatgaaccgtatcagtgct
gagaccatctttgttactgcacctcatgaaccaacctctggtattattggagtcaataaa
aaaggccaggttctttctgtctgtgtggaagaagaaaatattgtgaattacaccactaat
gtgctccaaaaccctgacttggctttgcgtatggctgtaagaagcaaccttgctggtgca
gaggagctctttgccaggaagtttaatactttgtttgcacaaggcaactatgctgaagca
gctaaagtagctgcgtctgcaccaaagggtatcctgaggactccggacaccattcggaaa
ttccagacggtcccggctcagccaggccaagcttctcctctccttcagtattttggaatc
ctcctcgaccaggggcaactgaacaagtacgagtccctggagctgtgccgacccgtcttg
cagcaaggacgcaagcagctgctggagaaatggctgaaggaagataagctggagtgttca
gaggagctgggcgatttggtgaaggcggctgatcccacacttgccctgagtgtctacctg
cgagccagtgtgccgaacaaagtcatacaatgctttgcagagaccggccagtttcagaaa
attgtgctttacgcaaaaaaggtcggctacacgccagattgggttttcctgctgagaaat
gtaatgcgggtgagcccagaccagggacttcagtttgcacagatgcttgtccaagatgag
gaacctttagctaatatcagtcagattgtggatatttttatggagaacaacctgatccag
caatgtacttccttccttctggatgctctgaagaataacaggccttcagagggtcacttg
cagacccgcctacttgaaatgaatctgatccacgcaccacaggttgctgacgcgatcctc
ggcaatcaaatgttcacccactacgaccgggcccatattgcccagctgtgtgagaaggcc
ggcttgttgcagagagccttggagcactacaccgatctgtacgacatcaaacgggctgtt
gtgcacacacatcttctcaaccctgagtggcttgtgaactactttggtgcactgtcggtg
gaagattcgctggagtgcttgcgtgccatgttgtccgcgaacattcgccagaacctgcag
ctctgtgtacaagtagcatccaagtaccacgagcagctcggcacacagtctctggtcgag
ctgtttgaatccttcaaaagctacgaaggattgttttatttcctcggatccattgtgaat
ttcagccaagagcccgacgttcacttcaagtacattcaagcagcctgcaagaccgggcag
attaaggaagtggaacgtatatgtcgcgagagcaactgttacgattcggaccgtgtgaaa
aacttcctcaaggaagccaagttgacggaccagctgccactgatcatcgtctgcgatcga
tttgattttgtccatgacctggttctgtacctgtatcgcaacaacctacagaaatacatt
gagatctatgttcagaaggtgaaccccagcaggctgccagtggtggtgggcggtctactc
gacgtcgactgctctgaagaagtcattaaaaacctcatcaatgtcgtccgcggtcagttt
tcaaccgatgagctggtgggtgaagtggaaaagaggaacagattgaaattgctgctgccc
tggctggaggctcgtattcatgagggctgtgaggagccagccacccacaacgctctagct
aagatatacatcgatagcaacaataacccagagcgcttcctgcgtgaaaacccatactat
gacagttctgtggttggaaaatactgtgagaagagggacccacacttggcttgtgtggct
tacgaaagaggccagtgcgacctggacctcatcaaggtttgcaacgagaattccctgttc
aagagcgaggcccggtaccttgtacgcagaagagaccccgagctttgggccagtgtcctt
gaagaaaataaccccttcagacgccagctgattgaccaggttgtacaaacagccctgtct
gaaacacaagatccagaggaagtttcagttactgtgaaggccttcatgacagctgacctt
cccaacgagctgattgaactgctggagaagatagtcctggataacaatgtcttcagtgaa
cacaggaatctccagaacctgctgattctcacggccattaaagcggaccgcacccgggtg
atggagtacattaatcgcctggacaactacgacgctcctgacatcgccaacattgccatc
agcaacgaactctttgaagaggcctttgccatcttccgaaagtttgacgtcaatacgtca
gcggtgcaggtcctgatcgaacacattggaaatctcgaccgcgcctacgagtttgcagaa
cgttgcaacgagccggccgtgtggagtcagttggcaagagcgcagttgcagaaggatctg
gtcaaagaagccatcgactcctacatcaaggctgacgatccctccgcctacatggaggtt
gtgaaagcagccaacaagaataataactgggaagacttggtgaagtttctgcaaatggcc
aagaagaaagccaaggagtcttacgttgagactgagttgatatttgccctggcaaagact
aaccgtctatccgagctggaggagtttgtcaatggacccaacaacgcccacattcaacag
gttggtgatcgctgctacgatgatggaatgtatgatgcagccaagttactgtacaataac
gtctctaactttgctcgcttggcctctactctggtgcaccttggagagtaccaggctgcc
gtggacagtgctcgcaaagctaacagcaccaggacttggaaagaggtttgctttgcctgt
gtagacgggcaggagttccgcctggctcaaatctgtgggatgcacattgtcatccacgcc
gatgaactagaggagctgatcatctactaccaggatcgaggatacttcgaagagctaata
gccctcttggaagcggcgttgggtttagaacgagctcatatgggaatgtttacagagctg
gcaatcctctactccaagtttaagcctcagaagatgcgagagcatttggaactcttctgg
tccagagttaacattccaaaggtgctgcgtgctgctgagcaggcccatctgtgggccgag
ctggtcttcctgtacgacaagtatgaagaatatgacaatgcagtgatcaccatgatgagc
cgacccactgatgcctggaaggaagggctgtacaaagacatcattgcaaaggttgccaat
gtggagttgtactacaaggccctgcagttttacctggacttcaaaccactactgatcaac
gatctcttaatggtgttgtcaccacgcttggaccacaccagggcagtcaccttcttcagt
aaggtggaccagttgcagctgatcaagccgtacctgcgatccgtgcagaatcacaacaac
aaatctgtcaacgaggcgctgaataatctgctgacggaagaggaggattaccagggtttg
cgtacatccatcgatgcgtacgataactttgacaacatcaccctcgcacagcgcctggag
aagcatgaactcatcgaattcaggcgtatcgctgcttacctctacaaaggcaacaatcgc
tggaagcagagtgtggaactgtgcaaaaaagatcgtctgtacaaggacgcgatgcagtac
gcagcagagtcgaaggacacggagctgtcggagaagctgctgcagtggttcctcgaggag
ggaaagcaggaatgttttgcctcttgcctgttcacctgctacgacctgctgcggcccgac
gtggtcctcgagctgtcgtggaggcacaacatcatggactttgcgatgccctacttcatc
caggtcatgcgagaatatctgagcaaagttgatgaattaatggaaaaggtggataaactg
gatgcttcagataatttaaggaaagacgaggagcaagtaactgaaccagctccgctcgcc
tttggtcagcacctgatgttgacatccggaagcactccagtcccccctcaacccgcctac
gcttacggctacccagccggctaccccgcccagccagcgtacggcttcaacatgtag
DBGET
integrated database retrieval system
