Leucoraja erinaceus (little skate): 129709225
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Entry
129709225 CDS
T09122
Symbol
trmt2a
Name
(RefSeq) tRNA (uracil-5-)-methyltransferase homolog A
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
leri03016
]
129709225 (trmt2a)
Transfer RNA biogenesis [BR:
leri03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
129709225 (trmt2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Ubie_methyltran
Methyltransf_4
PCMT
Methyltransf_11
RRM_1
Methyltransf_15
MTS
N6_N4_Mtase
Cons_hypoth95
Methyltransf_32
Methyltransf_23
PrmA
AviRa
RRM_occluded
RrnaAD
CMAS
NpmA
Methyltransf_12
Phage_Gp17
UPF0020
TehB
Motif
Other DBs
NCBI-GeneID:
129709225
NCBI-ProteinID:
XP_055511421
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Position
25:complement(30817432..30834004)
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AA seq
604 aa
AA seq
DB search
MSQTNLGTMAEEGASVSPGVVQSETCELTDSRVMEESEKSSPPDETRVETDEPGEDVYRY
IKGDLFTSEIYKIEIQNLPKFVSFSDLRKFLSRNNLVPHKIKLFGKQPYAFVTFKEEKDR
DQAMQVLQGQVWKNRNLRVRLAKPKADPIAKKRKQEGQENDDHDLKRPAAVEVLDRPLSE
QIADVVTPLWKVPYEEQLKKKEKNVLHVLGTLTTEIGVHNRALVPWVFQQKKMYGGTCCP
LEGVRPSPVQTEYRNKCEFLIGVGADGEDKTVGCRLGKYKGGSCAVVEPFDTVHIPAKTK
EVVKAFQKYIRSSPYCVYSPETYEGHWKQLTVRISRAKQIMAIVYFNPQKLTKAELAELQ
GELAKYFTEGDGKDCGVTSLYFAEEGQRKSPNLEDLPLDHVYGDKYIYEHLLGLKFRISP
HAFFQVNTLAAEVLYSAVRDWAKLNQDSTVLDVCCGTGTIGLSLAKNVRNVIGIEMCQEA
IEDAKVNAEINGLSNVEFLCGKAEDLFPTVINSLTSQNLVAVVDPPRAGLHSRVVLAIRR
AEHLKRLIYVACNARAAMNNFVDLCRAPSHRVKGSPFRPVKALAVDLFPHTMYYELLILF
ERVE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaactaatctcggcaccatggctgaagaaggagccagtgtatctcctggagtt
gttcaaagcgagacatgtgagctgacggattcaagagtgatggaggaaagtgaaaagtcc
agccccccggatgaaactcgggtggaaactgatgagcctggggaagacgtctatcgatat
atcaaaggcgatcttttcacatctgagatttacaagattgaaattcagaacctcccaaag
ttcgtgagcttcagtgatttaaggaaattcctcagcaggaataatctggttccacataaa
atcaaactatttggaaagcaaccttatgcatttgtgacttttaaagaagaaaaagatcga
gaccaagccatgcaagtccttcaggggcaagtctggaagaacaggaatttgcgtgtccga
ttagcaaagccaaaagcagatcctattgccaaaaaacgaaagcaggaaggccaggagaat
gatgatcatgacctgaaacgtccggctgctgtggaagttttagatagacctttaagtgag
caaatcgcagatgttgtgacccctctgtggaaagttccctatgaagagcaattgaaaaag
aaagagaagaatgtcttgcacgtcttgggaacattgaccactgaaataggagtccataat
cgagccttggtgccatgggtttttcagcagaaaaagatgtatggtggaacctgttgccca
ttggagggagtgaggccgtcaccagtgcagactgaataccgtaacaagtgcgagtttctc
attggagttggagcagatggtgaagataaaactgtgggatgtcgcttgggtaaatacaag
ggaggatcgtgtgcagttgtagagccatttgatactgttcatattccagccaaaacaaag
gaggttgtcaaggcatttcagaaatatataaggtcatctccttattgtgtgtacagccca
gaaacctatgaaggccactggaagcaattgactgtacgcatctccagagccaagcaaatt
atggccatcgtttacttcaaccctcagaaactaactaaagcagaactagcagaactacaa
ggcgaattggccaaatatttcactgaaggagatgggaaagattgtggagtgacttcactt
tactttgcagaagaaggtcagagaaaatctccaaacttggaagaccttcccttggaccat
gtgtacggagacaagtacatttacgagcatctcctgggactcaagttccggatttcccct
catgcatttttccaggtgaacaccctggctgcagaagtgctttattcagcagtcagagac
tgggccaaactgaaccaagacagcacggtgttggatgtttgctgcggtactggaactatt
gggctttctctggcaaagaatgtgaggaatgtcattggaattgaaatgtgccaagaagct
atagaagatgctaaagtgaatgcagaaataaatggtctgtccaatgtggaattcttgtgt
gggaaagcggaagatctctttcccacagtaattaactctttgacatcgcaaaacctggtg
gctgttgtggatccacccagagctggactacattccagagttgtactggcaataaggagg
gcagaacatctaaagaggctcatttatgttgcctgcaatgctcgagctgctatgaacaat
tttgtggatctttgtcgcgccccatctcacagagtgaaaggatctcctttccgccctgtt
aaagccttggctgtcgatctcttcccacataccatgtattacgagctgttaatattgttt
gagagagtggaatga
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