Leucoraja erinaceus (little skate): 129709273
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Entry
129709273 CDS
T09122
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
leri03016
]
129709273 (pus1)
Enzymes [BR:
leri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
129709273 (pus1)
Transfer RNA biogenesis [BR:
leri03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
129709273 (pus1)
Prokaryotic type
129709273 (pus1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
ILEI
Motif
Other DBs
NCBI-GeneID:
129709273
NCBI-ProteinID:
XP_055511514
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All DBs
Position
25:31970409..31976028
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AA seq
293 aa
AA seq
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TQSPVSFCLQGVSAAGQIVSLKLWLIDNLVEKVNENLPPGIKILGMRRVTGRFNSKNTCD
ARTYFYMLPTFALGHKDEGAGPETFRLSTCALGRVNKLLGCYKGTHNFHNFTSGKGPRDP
SAKRYIMEMFCEAPFVRQGVEFAVLKVKGQSFMMHQIRKMIGLVIAVVRGYAAEAILEQS
WGEAKVDVPKAPGLGLVLDTVHFEKYNQRFGSDGVHQALEWTDVEPQRAAFKEDHIYPTI
VTTEQEEQSMANWLNTLPIHDFTATASGNQLTDNHSKKMNDDVDGGSDVGESD
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
acccagtctcctgtctccttttgtttacagggtgtatcggctgctggtcagattgtctcg
ctgaaactctggctcatcgacaaccttgtggaaaaggtcaatgaaaacctgccgcccggc
attaaaatattagggatgaggcgtgtgacagggcggttcaactccaagaacacgtgcgat
gcccgcacctacttctacatgctgcccacctttgcgcttggccacaaggatgagggggct
ggtccagagacgttccgtctgagtacgtgtgctctgggccgagtcaacaagctgctgggc
tgctacaaaggcactcacaacttccacaacttcacgtctgggaagggtccgagagatccc
agcgccaagcgctacatcatggagatgttctgcgaagctccctttgtgcggcagggcgtg
gagttcgcggtgctgaaggtgaaggggcagagcttcatgatgcaccagatcaggaagatg
atcggcctggtgattgccgtggtgaggggttacgctgcggaggccatcctggagcagagc
tggggcgaggcgaaggtggacgtccccaaggccccgggcctggggctggtgttggacacc
gtccacttcgagaagtacaaccagcgcttcggcagcgatggggtccaccaggccctggag
tggaccgacgtggaaccacaaagggccgccttcaaagaggatcacatctaccccaccatc
gtcaccacggagcaggaggaacagtcaatggccaactggctcaacaccctacctattcac
gacttcactgccacagcctcaggcaaccagctaacggacaaccattccaagaagatgaac
gatgatgtggatggcggcagtgatgtgggtgaatctgactga
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