Leucoraja erinaceus (little skate): 129709327
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Entry
129709327 CDS
T09122
Symbol
lhx5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129709327 (lhx5)
Transcription factors [BR:
leri03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
129709327 (lhx5)
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GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Auxin_canalis
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
129709327
NCBI-ProteinID:
XP_055511582
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Position
25:8585602..8596318
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AA seq
407 aa
AA seq
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MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRFG
TKCAGCYQGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDYMS
TSSFKDTNLNSVSSCTDRSLSPDIQDQSIDDTKETDNSTSSDKETQNNENEEQTTGTKRR
GPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQL
SALGARRHAFFRSPRRMRPLGGRLDESEMMGSAQYNYYGEYQGDYYGPATNYDFFPHGPP
SSQAHSPADSGYMQSSGPGATSLGVLEPPLSAHHPPTIGGSENQRYTDMISHPDTPSPEP
GMTGPLHPIPGEVFSGGPSPPFSMSSNSGYSGPLSHPNQEMNETAVW
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggtgcattgtgctggttgcgagaggcctattttagataggtttctcttaaatgtgctg
gacagagcctggcacgtgaagtgcgtccagtgttgtgaatgcaagtgtaatttgactgaa
aaatgcttttccagggaagggaagctatactgtaaaaacgatttcttcaggcggtttggt
acgaaatgtgcaggatgttatcaaggtatctctccaagtgacctcgtaagaaaagcaaga
aacaaagtatttcatctcaactgttttacttgtatggtttgtaacaaacaactgtcgact
ggcgaggaactatatatcatcgacgaaaacaaatttgtgtgcaaagaagattatatgagc
actagcagttttaaagacaccaacttaaattcagtatcttcgtgtacagaccggagtttg
tcgcctgatatccaggaccagagtatagacgatacaaaagaaacggacaactcaacctcg
tcagacaaagagacgcagaataacgagaatgaggagcagaccaccggtaccaagaggagg
ggcccgcgcaccacaattaaagccaaacagttagaaacactaaaagccgctttcgccgct
accccgaagccgacgcgacacatacgggagcagcttgctcaggaaacaggcctcaacatg
cgggttattcaggtctggtttcagaacagaagatccaaggagcggaggatgaagcagttg
agcgctctgggggcgcggcggcacgctttcttccgaagtcccaggcgcatgcgccctttg
ggaggacgcttggacgagtcggagatgatggggtctgcccagtacaattactacggagaa
tatcaaggagattactatggcccggctacaaactatgactttttcccgcacggccccccg
tcttcgcaagcacattccccggcagattctggctacatgcagtcctcaggacccggagcg
acctcactcggagtactcgagcctcccctatccgcccaccaccctcccactatcggtggc
agcgaaaaccaaaggtatacggacatgatatcccaccccgacactcccagcccagagccg
ggtatgaccggacctctgcacccgatcccgggagaagtgttcagcggaggacccagtccg
cctttctccatgtcgagtaacagtggttacagcgggccgctatcacatccgaatcaggag
atgaacgagactgcggtctggtaa
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