Leucoraja erinaceus (little skate): 129709357
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Entry
129709357 CDS
T09122
Symbol
dhx37
Name
(RefSeq) probable ATP-dependent RNA helicase DHX37
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
leri03009
]
129709357 (dhx37)
Enzymes [BR:
leri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129709357 (dhx37)
Ribosome biogenesis [BR:
leri03009
]
Eukaryotic type
90S particles
Helicases
129709357 (dhx37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_22
HA2_N
AAA_19
ResIII
AAA_30
ATPase
nSTAND3
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
129709357
NCBI-ProteinID:
XP_055511632
LinkDB
All DBs
Position
25:complement(9963379..10012242)
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AA seq
1178 aa
AA seq
DB search
MEGGRCVRQLRKAQEREDCEFSAMGRLRKRHNWKARLQQSTVATKSEQSSDCVKVEIDLE
DGVTLKGVDECNPLVLPAKRAKRKQENKEVRASKKPLTKKQRKQLEKILEQKKKKAQRKD
ILSKLAECQVPESEMKLLYTTSKIGTGERLYQTKLLEPKVESECRISSVSGANRKRFRRN
SEDVEQAPESETSTSTDSSDTEEEQMDDVESEERDTTRPNTNEKNVSNEQIQNSSTSAAL
TKKPLVKKETSQNSMKQPSSEPAIFIPVNRIPTIQEARLKLPILAEEQVVMEAIIDNPIV
VVCGETGSGKTTQVPQFLYEAGYASGDGIIGITEPRRVAAISMSQRVAKEMNLSQRVVSY
QIRYEGNTTEDTKIKFMTDGVLLKEVQRDFLLTKYKVIIIDEAHERSVYTDILIGLLSRI
VPLREKKRQPMKLIVMSATLRVEDFTENKRLFPTSPPVVKVDARQFPVTVHFNKRTPLDD
YAGEAFRKVNKIHRMLPPGGILVFLTGQAEVHSLCRRLRRAFPYKRGSALQEADPDNDDS
VEAIKKFKKAKSKPNLPKINLDNYSAMPVDEGNEDREAGIGDEDEVGSDLDLDLGDVDDP
EEAEKSDPSIPLYVLPLYSLLAADKQAKVFLPTPNGTRLCVVATNVAETSLTIPNIKYVV
DCGKVKKRFYDKVTGVSSFKITWISQASSNQRAGRAGRTDPGHCYRLYSSAVFADFEKFS
AAEITRRPVDDLVLQMKDLNIEKVINFPFPTPPSTESLIAAEELLVSLGALEEPPKHGRF
KELERAKLSCPITSLGRAMASFPVAPRYAKMLALSKQHDCMSYVIVIVAAMTVRELFEQF
DRPAISDEKTEELKKKKARISQMQRVWAGQGPSLKLGDIMVMLGAVGACEYSGCTPHFCF
KNGLRHKSMVEIRRLRGQLTNVVNAIFPEIGLFVDPKMKPPTETQVLYLRQIVMAGLGDH
IARKVQSEDVLDEKLRHAYKTPLLDEPVFIHPNSVLFKHLPEFVVYQEIVETSKMYMQGL
TTIEPEWIPLLLPQYSHYGKPLDTPPPRYCPDIGQIKCHRGSTFFRVGWQLPAVEVDYPE
GLDRYKYFAKFLLEGTVFKKFASYSNCLLSSPSTMLKSWAKLQPRTDALLRVLVSEKVDN
REALLTAWKKDGQYLLSAYCQWLPEAVHANVSLHWPPT
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggggaggtgtgttcgacaattgagaaaggcacaggaaagagaagattgcgaa
ttttcggcaatgggaagattacgtaaaaggcacaactggaaggcacgacttcagcaaagt
acggtggcaaccaagtcagagcaatccagtgattgcgtcaaggttgagattgatctggaa
gatggagttacgttaaaaggagtagatgaatgtaacccactggttctaccagcgaaaaga
gccaaaagaaagcaggagaacaaggaagttagggcatcaaagaaacccctgaccaaaaaa
caaaggaaacagctggagaaaatattggagcagaagaaaaagaaagctcagaggaaagat
attctgagtaaattggcagaatgtcaagtcccggagtccgagatgaagcttttatacacc
acctcaaaaattggcaccggtgaacgcttgtaccagactaaactgttggaacctaaagtt
gaaagtgagtgccgaatcagcagtgtcagtggggcgaacaggaaaagattcagaagaaac
tctgaggatgtggagcaagcaccagagtctgaaaccagcacatctacagacagttcagat
actgaagaggaacaaatggatgatgttgaaagtgaagaaagagacaccactcggccaaat
acaaatgagaagaatgtcagcaatgaacaaattcaaaactcaagcacttcagcagcactg
acaaagaagccattggtgaagaaggaaactagtcaaaactcaatgaagcagccttcctca
gagccagctattttcattccagtgaacaggatcccaaccattcaggaagctcgcctcaag
ttaccaattctagcagaagaacaagttgtaatggaggccattatagataacccaattgta
gttgtgtgtggtgagacaggcagtggtaaaacgacacaagtcccccagttcctctatgaa
gctggatatgccagtggtgatggaatcattggcatcacagagcccaggcgggtagcagct
ataagcatgtcccaacgagttgccaaagaaatgaatctctcacaaagggtggtttcatat
caaatacgatatgaaggcaacacaacagaagacacaaaaataaagtttatgacggacggt
gtccttctaaaagaagtccagagggatttcttgctcacaaaatataaagtaatcattatt
gatgaagctcacgagcggagtgtgtacacagacatcctgattggtctgctctctcgtatt
gttccacttcgagaaaagaaaagacagccaatgaaactgattgtaatgtcagccactctg
cgtgtggaggatttcacagaaaacaaaagactgtttccaacctctccccctgttgttaag
gtggatgccaggcagtttcctgtcacagttcacttcaacaagcggactccacttgatgac
tacgcaggggaggcttttaggaaagttaacaagatccatagaatgttacctccaggagga
atcttggtgtttctgacagggcaggctgaagtgcattcactgtgcagaaggctgagaaga
gctttcccgtacaagcgtggcagtgctttacaagaagctgatcctgataatgatgattca
gttgaagcgataaagaagtttaaaaaggccaaatctaaaccaaatttgccaaagatcaat
cttgataattactctgcaatgccagtggatgaggggaatgaagatcgagaggcggggatt
ggcgatgaagatgaagttggctctgatcttgatctggatttaggggatgttgatgatcct
gaagaagctgagaagtcggatccttctattccgctttacgttcttccactctactcattg
ctggcagcggataaacaagcaaaggtattccttccaactccaaatggcacaagattgtgt
gtggtggcaaccaacgtagctgaaacctctctcactatcccaaacattaaatatgtggtg
gattgcggaaaggtgaaaaaacgcttttatgataaggttacgggagtgtcgtcattcaaa
attacttggatctcccaagcttcatctaatcaaagagcgggtcgtgctggtcgaacagac
ccaggtcactgttacaggctgtattcctcagcagtttttgctgactttgagaaattctct
gcagctgagattacaaggcggcctgttgacgatctcgttctgcagatgaaagacttgaac
attgaaaaggtgatcaattttccattcccaacacctccgtcgacagagtccctaatagct
gctgaggaattgctcgtttctcttggagctttggaggaaccaccaaagcatgggaggttt
aaggagttggaacgagcaaagctgagttgtcctatcacgtcacttggtagggcaatggca
tccttccctgtagcacctcgatatgccaagatgcttgccttaagcaagcaacatgactgt
atgtcgtatgtcatcgtgatcgttgctgcgatgactgtgcgagagttgtttgagcagttc
gacagaccagccattagtgatgaaaagacagaagaactgaaaaagaagaaagccagaatc
tctcaaatgcagcgtgtttgggctggacaaggtccttcccttaaactcggagacatcatg
gtcatgcttggcgctgttggtgcatgtgagtactcagggtgcactcctcacttctgtttt
aaaaatgggctgcgacacaagtcgatggttgaaatcagacgtttacgagggcagctgaca
aatgttgtaaatgctatcttcccagaaattggattgtttgttgaccccaagatgaaacct
ccaacagaaactcaggtcctgtacttaaggcagattgtaatggctggtcttggagatcac
attgcaaggaaagtccagtcggaggatgtgttagatgaaaaattgagacatgcctacaag
acccctctccttgatgaaccggtgtttatccatccaaattcagtgctgttcaaacatctt
cccgagtttgtggtttatcaagagatagtggagacttccaagatgtacatgcaagggctg
actacgattgaaccagagtggatccctctcctcctcccgcagtacagtcactatggcaaa
cctctggatacaccccctccacgttactgccctgacatcggtcagattaaatgtcacaga
ggaagcacctttttccgagttggctggcaacttcctgcagtcgaagtcgactacccagag
ggactggaccgatacaagtactttgccaagtttttgttggaaggaacggtctttaaaaag
tttgcttcatactccaattgtctactttccagtccatcgactatgttgaagtcctgggcc
aagctccagccaaggacagatgcactgctgagagttctggtgtctgagaaggtggacaac
cgtgaagcgctactcactgcctggaagaaagatggccaatacctattatcagcttattgt
caatggcttcctgaggcagtgcacgcaaatgtttctcttcactggcctccaacgtaa
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