Leucoraja erinaceus (little skate): 129709365
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Entry
129709365 CDS
T09122
Symbol
ube3b
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129709365 (ube3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129709365 (ube3b)
Enzymes [BR:
leri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129709365 (ube3b)
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
HECT type E3
129709365 (ube3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
129709365
NCBI-ProteinID:
XP_055511640
LinkDB
All DBs
Position
25:complement(27882975..27934422)
Genome browser
AA seq
1066 aa
AA seq
DB search
MFSMIQTSKTEFLDMARAAREERKGQKERERATIVIQALVRRYLCRCRLLRTIRHEIDDF
FDVSESNSSKRSALVVFKIARKLLFVFNVKEDKERLQKLCNCVLNSMEVENEPKVWYVSI
ALSKDLTLLWIKQVKDLLWICCVFLKRLKPDILQDAKFITLYLTVLITLTDASNWKILKG
KGEALRPAMNHICANIMGHLNQKGYYTVLQILLTNGLARSKPSLSKATLTAIFTLALRPM
IVAHFSDNLLRSFLLHIMSVPALVTHLSTIVPECMSMVHSHELLRKFILFLSRDEQCDDI
CVCLEGSHTLCLLGNLIYLAYLSEKVLEEETSHFISVLTAMLSYCQKYVSQKKSNLTHWH
PVLGWFSQTVDYGMNEAMPLVTRQLQYLWSVRVIRLLFQYVLSKKLPELQDVVHSYAQSS
SSSNNIQVKNLFKRAFQKSASMRNILKPVGGKRVDSPEVQKVCSICVLYQTALTTLTQIR
LQILTGLTYLDDLLPKLWAFICELGPQGGLKLFLECLNNDTEESKRLLAMLMLFCDCSRH
LITILDEIEVYEEQVSFKLEELVTISSFLNSFVFKMIWDGIQESANGEQLELFHAVHGWL
MTLYERDCRRRFAPDDHWLRKDLKPSLIFQDLDKGRKRAQLLLQYIPHTIPHKNRVLLFR
NMVTKEKGTLGLVETSSASPHVIHVTIRRSRMLEDGYEQLRRLPVNTMKGVIRVKFMNDL
GVDEAGIDQDGVFKEFLEEIIKKVFDPALNLFKTTSGDERLYPSPTSYIHENVYETKKYL
NISFQQGIVVDVPFASFFLSQVLGHHHSALYSSIDELPSLDAEFYKNLTSIKRYDGDIGD
LGLTLSYDEDVMGQLVCHELIPGGKTIGVTNENKISYIHLMAHFRMHTQVKDQTVAFIRG
FRSIINPEWLRMFSTPEVQRLIAGDNAEIDLEDLKKHTVYYGGFHGSHRVIAWLWDILAH
DFTAEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIR
KKEPGGRLPTSSTCFNLLKLPNYSKKSILREKLRYAISMNTGFELS
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcatgatacaaacctccaagaccgagttcctggacatggcccgggctgctcgg
gaggagagaaaagggcagaaggaacgtgagcgtgcaacgattgtgatccaagcgctggtc
aggaggtacctctgcaggtgtcggctgctgagaacaatcagacatgaaatcgatgatttt
tttgacgtcagtgaatctaattcttcaaagagaagtgcgctcgttgtgttcaaaatagca
aggaaattgctctttgtgtttaatgtgaaagaagataaagagagacttcagaagctgtgc
aactgtgtcctgaatagcatggaagtggagaatgaacccaaggtatggtatgtctcaata
gcactttccaaagatctcaccctgctatggatcaaacaagtaaaagacctcctctggatc
tgctgtgtatttttaaagcggctgaagccagatattctgcaggacgccaagttcatcacc
ttgtatcttacggtgctgatcacactcaccgatgcttcaaactggaaaatactgaagggg
aaaggcgaagccctgagacctgccatgaaccatatttgtgcaaacatcatgggacatctc
aatcaaaagggttattacacagtgctacagatattgttaacgaatggactggcaagatcc
aaaccatctctgtccaaagccacattaacagccattttcacccttgcgttacgaccaatg
attgtcgcacacttctcagataacctgctccgttctttcctgctgcacatcatgtcagtc
ccagcactggtgacgcatctctccactatagtacccgagtgcatgtcgatggtccattcc
cacgagctgctgcgaaaattcatcctgttcttaagtcgagacgagcagtgcgatgatatc
tgtgtctgcttggaaggaagccatacactttgtttgctgggcaacctgatttatttggcc
tatctgtccgagaaggttttggaggaggagacgagtcactttatcagtgtgctgactgct
atgctgtcgtattgccagaaatatgtatctcaaaagaagtctaacctgacacactggcac
cctgttctgggctggttctcacagactgttgactatgggatgaatgaagcaatgccactg
gtcaccaggcagttgcagtacctgtggagcgtacgggtcattcgcctgttgttccaatat
gttctcagcaaaaaattacccgagcttcaagacgtggtgcattcatacgctcagtcctcc
agctcttcaaataacattcaggtcaaaaacctcttcaaacgagcctttcaaaagtcagcg
tccatgcgcaacattctgaagccggttggcgggaagcgagtggactcccccgaggttcag
aaagtctgcagtatctgcgtgttgtatcagacggcattgactacactcacccagattcga
ctccagatcctcaccgggttaacctatttagacgacttgttgcccaagctgtgggcattc
atttgtgagttggggccccaggggggcttgaagctattccttgaatgcctgaacaatgac
accgaggaatccaagcggcttcttgcaatgctgatgttgttttgtgactgctctcggcac
cttatcacgattctggatgaaatcgaggtgtatgaagagcaagtatcatttaagctggaa
gagctggtcaccatctcctccttcctaaatagctttgtatttaaaatgatctgggatggc
attcaggaaagtgcgaatggggagcaactggagctgttccacgctgttcacgggtggctg
atgactctgtacgagcgagactgccggcgacgttttgcccccgacgatcactggctgcgc
aaggacttgaaacccagcttgatattccaggatttggataaagggaggaagcgagcccag
ttattattgcagtacatccctcataccatcccacacaagaatagagtgctgttgtttcgg
aatatggtgacgaaggagaaggggacattgggtttggtggagacaagctctgcatcccct
catgttatccatgttaccatccgcagatcccgcatgcttgaggatggatatgaacaattg
cgccgattgcctgttaacacgatgaagggggtcattcgagtgaaatttatgaatgatctt
ggagtagatgaggctggcattgatcaggacggtgtcttcaaggaatttttagaagaaatc
atcaagaaggtctttgacccagctctcaatctcttcaagacaaccagtggagatgagcga
ctatacccatcccccacctcgtacatccatgaaaacgtctatgagactaaaaagtatttg
aacatttcctttcaacaggggatagtggtggatgttccctttgcctccttcttcctcagt
caggtgcttggacatcatcacagtgcattgtacagctcaattgacgaacttccatccctg
gatgctgagttctacaaaaacctcacttccataaagcgttacgatggtgacattggtgac
cttggtttaacattatcttatgatgaagatgttatgggtcagcttgtttgccacgagctg
ataccaggaggaaaaaccataggggtaaccaatgaaaataaaatcagttacatccacctg
atggcccacttccgcatgcacactcaggttaaagaccagacggtggctttcatccgcggc
ttccgctccatcattaaccccgagtggctccgtatgttttccacgcctgaagtgcagcgc
ctcattgcaggagacaacgccgagatcgacttggaggacctcaaaaagcacacggtatat
tacggaggcttccatggcagtcaccgagtcattgcctggctctgggatattttagctcac
gacttcacagcagaagaacgagccatgtttcttaagtttgtcaccagctgctcccgacca
cccctcctgggctttgcttaccttaaaccccccttctccattcgctgtgtggaggtttca
gacgatcaggacacgggggatacgctgggtagcgtactgcgcggtttcttcaccatccgc
aagaaggagccgggcggccggctgccgacctcttcaacctgcttcaacctcctgaagctt
cctaactacagcaagaagagcatcttgagagagaaactccgctatgcaatcagtatgaac
accggatttgaactctcctaa
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