Leucoraja erinaceus (little skate): 129709386
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Entry
129709386 CDS
T09122
Symbol
clip1a
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
129709386 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
leri03036
]
129709386 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
leri04812
]
129709386 (clip1a)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
129709386 (clip1a)
Cytoskeleton proteins [BR:
leri04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
129709386 (clip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
HALZ
Motif
Other DBs
NCBI-GeneID:
129709386
NCBI-ProteinID:
XP_055511678
LinkDB
All DBs
Position
25:12343289..12472227
Genome browser
AA seq
1742 aa
AA seq
DB search
MSLLKPSGLKAPSKIAKPASAAVKQAASSQSATPIATTDKTSTGEKSSSASTTEDQEEHV
ADFNIGERIWVNGSKPGYIQFLGESQFAPGQWAGIVLDEPIGKNDGSVASVRYFQCEPLH
GIFTRPSKLSRSPVIDGEAGDSQTRAASVSRATSPTSTSTSVATAPSTPTAQKAASGGPQ
EPAAMSNLLKTGSESVSNLSEAGSVKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGE
WCGVELDEPLGKNDGAVAGTRYFQCQTKYGLFAPVHKVTRIGFPSTTPAKAKTSVRKVVT
TPSNLKRSPSASSISSLSSVASSISGRPSRSGLLTETSSRYARKISGTTALQEALKEKQQ
HIEQLLAERDLERGEVAKATSHVGEIEQELTLLRTGHEQNVLEMEAKMDQLRALVEAADR
EKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKAEK
LQRELEDTRVATVSEKSRIMELERDLTSRTKEVSELRQRLASVEVSGNVESAPLLEDISC
MREKLATINEEHQCELKTLKVKLETSEEDHQKIVQRLQGASEKVSKENVTLKSKLDQANI
ENSEVVSLWKSKLESSIESHQKAMEELKFSFSKGADSQTTELLDLKSNFEKLKTDHQMEL
ENIKIQQDLEKSNYLKKTEGLKSQLIEVTAEKEKDIDTLKLQLEYATNQHLVEMEETLTK
LQETKEKATELQVLQAKSTEQAQTVEELTAKVAAAEQKVMGYELLQDVEAQGREELKRLE
EKLAAVESQLKITEALKFSEGSKVSDLAKQLEEQDLSVVNLKQNLTLVSQEKQNFEQQLQ
TMKEQFDGASDAQHKLQETLQETLAKLLVKEEQNASLSSEVVELKSQFSALERRTKVDEE
RAEQLSEDKTKLENTISEMMKSSGDNSAQLTKMNEELKLKERRQDELQDLLHQSSEKIAC
LQEHLEQSTNKAKQMQEEQQNKTQTELQTLQEKITDLQQQVEMHSAHTKELQSNHEKVVS
EINVNRDTLVKDLKTRLQETKEALKISQEKSNQREKLVEELQKQTEQVQSLTSELASAKS
QYEQIAEDVRALKGDKEQMIQQNGALKSEKESLFSELSEVKLQCTSLQKEQQVLESKNED
LQLERTALLKERQDLEGTQQQLCLEKDALVTEKDDLSLAAKHLQQLLEKLTKENEDRQTS
QSDLSKQLDNIQIKCKAAESELAQLHHKKEELLSAHGEMIAEREELAKEKDRIIENFHKF
REETSVALEKRVKERDVLIVEKDSTLLKCSELEAQYETLTKEKILLKSTHDEVISKNETL
TKEKDDLSSSLQKTILENKSFIISKDQLQSSHDQLKNELEKYMKENAELQASKASQSKLL
DEIKNSREVTDSERIQLLQEKEEQTTSLRQLTVERDELAKEKMELTAKLQKSIEEAKQQN
EERDALKSETDLLWLKQSQLEMQCDLLQKEKATLESKSNMQMAENESLSGEIVEFKLSQQ
QLISEIEYTVTEKDQLFGNVELLTQNLDESAKVNEELQASNSRLTTHLDEIQKSKNIVDL
ERHSLLQEKEKLVAELEAQCSEKEHLTRQRVKLEEKYNVLNEQVRVLENQLIQERDAAEM
EKEALNEAHAELENNVHVLTNEMGVLKAKHDELLSENNVLIKEKERFQAEQNKFAGERED
QVAEKNYLMSTIDELKKKVDTLSKEKVELQASESNLLKLLDGLRSCQEISDLDQMRLQGE
KG
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgctaaaacctagtgggctgaaagctcccagcaagattgccaagcctgcaagt
gctgcagtgaagcaagcagcttcttcacaatcagcaacacccattgctaccacagacaaa
acatcaactggagagaaatcttcaagtgcatccaccacggaggatcaagaagaacacgtg
gctgacttcaatatcggagagcgcatctgggtaaatggcagtaaacctgggtacatccag
ttccttggtgagagtcagtttgctccaggacagtgggctggaattgttttggatgaacca
attggtaaaaatgatggttcagttgccagtgttcgatatttccaatgtgaaccattgcat
gggatatttacaagaccttcaaagttgtctcgaagcccagtgatagatggtgaagctggt
gattcacaaactcgtgcagcgtctgtttccagagccacatcaccaacatctacatcaacc
agtgttgcaactgctccatctacaccaactgcgcaaaaagctgcatcaggtggacctcag
gaacctgcagccatgtccaacctcttaaaaacaggaagtgaatctgtgtcaaacctctca
gaagctggttcagttaagaaaggggaacgcgagttaaagattggagaccgggttctggtt
ggtggtacgaaagccggagtagtgcgcttcttgggagagacggactttgctaagggggaa
tggtgcggagtcgagctggatgaacctcttggaaagaatgatggagctgtggctggaacc
agatattttcagtgccagaccaagtatggtctgtttgcaccagttcataaggttaccaga
attggatttccctcgacgacaccagctaaagccaagacatctgtacgaaaagtagtcacc
accccatcaaatctcaaacgaagtcctagtgcatcatccatcagctctttaagctctgta
gcatcttccatcagtgggagaccgagtcgatcaggattgctaacagaaacgtcctcgcgt
tatgcaagaaaaatttcaggcaccactgcattacaggaggcattaaaggaaaagcagcag
cacattgaacagctactggctgaacgagacttggaaagaggagaggttgccaaggcaact
agccacgtgggagaaattgaacaggagctcacgttacttcggacgggtcacgaacagaat
gtattggagatggaggcgaaaatggaccagttacgagcactggtggaggctgctgacaga
gagaaggtggagcttttgaaccagctagaagaagaaaaaagaaaagtggaagatctacag
ttccgtgtagaggaagagtctattaccaaaggtgatttagagacgcagaccaaactggag
catgcccgcattaaggagcttgaacagagcctgctctttgaaaagaccaaagctgaaaaa
cttcagagagagttagaagacactagggtggccactgtgtctgagaagtctcggattatg
gagttagaaagggatctaacatcacgtacaaaagaagtctcggagcttcgacaaagactc
gcaagcgtagaagtttctggtaatgtggagagtgcacctttgttggaagacatttcctgt
atgcgagagaaacttgcaacgataaatgaagagcatcaatgtgaacttaaaacattgaaa
gtaaaacttgaaacctcagaggaagatcaccaaaagatagttcaacggctgcaaggtgcc
agtgaaaaggtttccaaggagaatgtgactctcaaatccaaactagatcaagccaatatt
gaaaactcagaggttgttagtctatggaaaagcaagctagagtcttcaatagaatcccat
cagaaagccatggaagaactcaagttttctttcagtaaaggagcagattcccaaaccaca
gagcttctagatctgaagagtaattttgaaaagcttaaaacagaccatcaaatggaactt
gagaatattaaaatacagcaagatttagaaaaatcaaactacctaaaaaaaactgaaggt
ttaaaatctcagctaatagaagtcactgcagaaaaggagaaagatatagatactctgaag
ttgcaactggaatatgctacaaaccaacacctggtagaaatggaagagactttgacaaaa
ctacaggagaccaaagagaaggcaacagaattgcaagttttgcaggctaagagcactgaa
caggcacaaactgtagaggaactaacagctaaagtagcagcagcagaacaaaaggtgatg
ggttatgaattgctgcaagatgttgaagcgcaaggtagagaggaactcaaaaggcttgaa
gagaagcttgcagcggttgagtcgcagttgaaaataactgaagctttaaagttttccgaa
gggagcaaggttagtgatttggccaaacagctggaggagcaggatctgtcagttgttaat
ctgaagcaaaatctgactttagtgagccaggagaaacaaaatttcgagcaacaacttcag
acgatgaaagaacaatttgatggagcatctgatgcacaacacaaattgcaagagacctta
caagaaacacttgcaaagctccttgtgaaagaagagcaaaacgcttctctttcttctgag
gtagtggagctcaaatctcagttttctgctctcgagagaagaactaaagttgacgaggaa
agggcagaacaactctctgaggataaaaccaaacttgagaacaccatctctgagatgatg
aagtcttcaggggacaactctgcccaactaacaaagatgaatgaagagctgaaactcaaa
gaaaggaggcaggatgaactacaagatctgcttcatcaatccagtgaaaagatcgcttgt
ttacaggaacatttggagcaatccacaaataaagcaaaacagatgcaggaagagcagcaa
aacaaaactcagactgagcttcaaacattacaggagaaaataacagatctgcagcagcag
gtggaaatgcacagtgcacacactaaggaactgcaaagcaaccatgagaaagtagtttca
gaaataaatgtaaaccgtgatactttagtgaaggacctcaagacaaggttgcaggaaacc
aaagaagcactgaagatctctcaagagaaaagtaatcaaagagaaaaacttgtagaagaa
ctacagaagcaaacggaacaggtccagtctttaaccagtgagctagcatcagccaaatct
cagtatgagcaaatagcagaggatgtgagagctttgaagggagataaagaacagatgatc
cagcaaaacggtgcactaaaatccgagaaagagtccttattttctgaactttcagaggtg
aagttacagtgtacctccctgcagaaagagcagcaagtgttagaatcaaagaatgaggat
ctccagttggaaagaacagcacttttaaaagagaggcaggatctcgagggtactcagcaa
caactttgcctggaaaaggacgctttggtcacagaaaaagacgacctttccttagcagcc
aaacatttgcagcagctcctggaaaagttaaccaaagaaaatgaggatcgccaaacctcg
cagtcggacctgagtaaacagctagacaatattcagataaaatgcaaagctgctgaaagt
gaactagcccagctgcatcataaaaaggaagagttgttatcggcccacggggaaatgatt
gcagaaagagaggaacttgcaaaagaaaaagacagaattatcgaaaactttcacaagttt
cgtgaagagacatcagttgctctggaaaagcgggtgaaggaaagagatgtgctgatagtg
gaaaaagattctactctattgaaatgctcagagcttgaagcacaatatgaaactttaaca
aaggagaaaattctgctgaaatcgacacacgatgaggtgatatctaaaaatgaaactctt
acaaaagaaaaagatgatcttagttcaagtttgcagaagactatccttgaaaataaatct
ttcattatttcaaaagatcagctgcagagtagtcatgatcaattgaagaatgagctggaa
aaatacatgaaggaaaatgcagagctccaggcttcaaaagctagccagtcaaaactcttg
gatgagattaagaatagcagggaggtaacagattctgaacgtattcagctgctccaggag
aaggaagagcaaacaacatctctgagacaactaactgtagaaagggatgaactagctaag
gaaaagatggagctgactgcaaagctgcagaaatccattgaggaggcaaagcaacaaaat
gaagagagagatgccctgaaatctgagacagatttgctttggctgaagcagtcgcagcta
gaaatgcaatgtgacttgttacaaaaggagaaggcaaccttggaatcaaaaagcaacatg
caaatggcagaaaatgaatctctctcgggtgagatagtcgaatttaaattgagccaacag
caactcatctctgaaattgaatacacagttacggaaaaagatcagctcttcggcaacgtt
gagcttttaacgcaaaaccttgacgagtccgccaaagtaaatgaagaactccaagcctca
aattcgagactcaccacacatttggatgaaattcagaagagcaaaaatattgtggattta
gagagacattccttgttacaagaaaaggaaaagctggtagctgaacttgaggcacagtgc
tctgaaaaggagcatcttactcggcagagggtgaaattagaggaaaaatacaatgtactg
aatgaacaagtgagagtacttgagaaccaactaatacaagaaagagatgcagcagaaatg
gaaaaggaggctctgaatgaggctcatgcagaacttgaaaataatgttcacgtattgaca
aatgaaatgggtgttcttaaagctaagcatgacgaattgctttcagaaaataatgtgtta
ataaaagaaaaagagagatttcaggctgaacaaaataagtttgctggtgagagggaagat
caagtagctgagaagaattacctaatgtccaccattgacgagctgaagaagaaggttgat
acattgagcaaagaaaaagtagagctccaggcttcagaatcaaatcttttgaaactcttg
gacggacttcgcagttgtcaggagatttctgatttggatcaaatgaggctgcagggagaa
aaaggataa
DBGET
integrated database retrieval system
