Leucoraja erinaceus (little skate): 129709446
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Entry
129709446 CDS
T09122
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129709446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129709446
Enzymes [BR:
leri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129709446
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129709446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
WWE_5
zf-rbx1
zf-RING_2
zf_RING_Vps8_fungal
zf-RING_Vps41
zf-UDP
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
129709446
NCBI-ProteinID:
XP_055511825
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All DBs
Position
25:complement(15182586..15355297)
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AA seq
620 aa
AA seq
DB search
MARSAAPAMLSASGFGFPPQNFARVVVWEWLNEHGRWRPYGATVCHHIENIVKCNARGSV
VLGQADPHLSPYIIDLQSMHQFRQDTGTMRPVRRNFYDPSSAPGKGVVWEWENDSCSWTP
YDMDICITIQNAYEKQHPWLDLTSLGFCYIIDFNSMCQMNRQTQRKRRLRRRMDLAYPLT
MGSIPKSQSWPIGTQSGQPCSCQQCVLVNSTRAASNAILESQRRKVYAAANGTLTVRQSN
SYNGPALWSAMSSAGTIAPNPEQARSPTTTTQLSPISQSQSTTTTTPIPGQNNLNRPGTQ
RSAVVSTRASIPPGVPALPVKNLNGSGPVHPALAGMTGILMCAAGLPVCLTRAPKPILHP
PPVNKSEIKPVPGISGICRKTKKKHLKKGKSPEDVVRRYMQKVKNPPDEDCTICMERLIS
SSGYEGVLNLKGVKPELVGRLSKCSHMYHLLCLVAMYNNGNKDGSLQCPTCKAIYGEKTG
TQPPGKMEYHVIPHSLPGYPEFKTIRIVYDIPAGLQGVEHPNQGKKFTARGFPRHCYLPD
NDKGRKILKLLIVAWDRRLIFTIGTSNTTGETDTVVWNEIHHKTEFGSNLTGHGYADPNY
LDNVLAELSAQGVMEDCIKD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctccgccgccccggcgatgctgtcggctagcggcttcggcttccccccgcag
aatttcgcccgggtggtggtgtgggaatggttgaacgagcacggccgctggagaccgtac
ggggccaccgtgtgtcaccacatcgagaacatcgtgaagtgcaatgcccggggcagcgtg
gtgctggggcaggcggacccgcacctctccccttatatcatcgacttgcaatccatgcat
cagtttagacaagacacaggaaccatgcgcccagttagaaggaatttttacgacccttct
tcagctccggggaaaggcgtagtttgggaatgggaaaacgacagttgttcctggactccg
tacgacatggatatttgcataaccatccaaaatgcgtacgagaagcaacatccgtggttg
gacttgacctctctgggcttctgttatattattgacttcaatagcatgtgccagatgaac
agacagacacaacgtaagcgacgactgaggaggcgtatggacttggcctaccccttgact
atgggctccatccccaaatctcagtcctggcccatcggcacgcagtcggggcaaccgtgc
agctgccaacaatgcgtcctggtcaacagcaccagggcagcctccaacgccatcctggaa
tcccaacggcgcaaggtctacgcggcagccaacggcacactgaccgtgcgacaaagcaac
tcctacaacggccccgccttgtggtcagcgatgagcagtgcgggcaccatagcccccaac
cccgagcaggcccgctcgcccaccaccaccacccaactctcacctatctcgcagagccag
agcaccaccaccaccactcccatccccggccagaacaacctgaacagacccgggacccaa
cgatctgctgtcgtcagcaccagagcctccatcccccctggggttcctgctcttccagtg
aaaaacctaaatgggtctggcccagttcatccagctcttgcaggaatgaccgggatcctg
atgtgcgcagctggacttcccgtgtgcctgacccgtgctccgaaacccattcttcaccct
ccgcctgtcaataagagtgaaataaagccagtgcctgggatatcaggtatctgcaggaag
accaagaaaaagcatctgaagaaaggaaaatctccagaggacgtggtgcggagatacatg
cagaaggtcaagaatccgccagatgaggattgcaccatctgtatggagaggctgatcagt
tcctcaggctatgagggggtgctgaatctgaagggggtgaagcctgaactggtgggaagg
ctcagcaaatgcagccacatgtaccatctcctgtgtctggtggccatgtacaacaatggc
aacaaggacggcagcctgcaatgccccacctgcaaggctatctatggtgagaaaactgga
acacagccacctgggaagatggaataccatgtgatcccacattcgttgccaggatacccc
gagttcaaaacaatccgcattgtctacgacatcccagcaggactacagggcgttgaacac
cctaaccaagggaagaagttcactgccagaggatttccacggcactgctacctgcccgac
aatgacaaaggacgcaagatcctgaagctgctgattgtggcgtgggaccgcaggctgata
ttcaccatcggaacatccaacaccaccggtgaaacggatacagtggtgtggaacgaaatc
catcacaaaacagagtttggatcaaatttaactggacatggctacgcagatcccaactat
ttggacaacgtgctggcagagttatctgcccaaggggtcatggaggactgtataaaggac
tga
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