Leucoraja erinacea (little skate): 129709453
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Entry
129709453 CDS
T09122
Symbol
ap1b1
Name
(RefSeq) AP-1 complex subunit beta-1 isoform X1
KO
K12392
AP-1 complex subunit beta-1
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129709453 (ap1b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129709453 (ap1b1)
Membrane trafficking [BR:
leri04131
]
Endosome - Golgi transport
Others
AP-1 complex
129709453 (ap1b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
Alpha_adaptinC2
HEAT
PDS5
Cnd3
Arm
Maestro_HEAT
HEAT_EZ
Arm_2
API5
FANCI_S3
Transposase_22
Motif
Other DBs
NCBI-GeneID:
129709453
NCBI-ProteinID:
XP_055511836
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All DBs
Position
25:complement(15890283..15949105)
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AA seq
955 aa
AA seq
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MTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANA
VAALSEIAESHPNSNLLDLNFQTINKLLTALNECTEWGQIFILDCLANYSPKDDREAQSI
CERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLLSAEPELQY
VALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIKDIFRK
YPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVAAKEV
VLAEKPLISEETDLIEPTLLDELICHIGTLASVYHKPPSAFVEGSRGVQHKRLPPRSGSN
ESTESPDVTATAAPQAAEQQPAVIPSQGDLLGDLLNLDLGPSVNVPPIPSSTVQMGAMDL
LGGGLDSLMGDETEGLGGDIGGSPAIGAGYGTPAVMPASLNATVGGGLGDLFDLAGGMGV
PSGSYVAPKTIWLPAAKAKGLEISGTFSRRMGHIYMDLTLMNKAMQVMSDFAIQFNKNSF
GMVPAAPLQINAPLTPNQTIEASLLLHTVGAVMKMDPLTNLQVAVKNNIDVFYFSCLYPI
NILFLEEGKLDRQIFLATWKDIPNENEVQFQIKDCHLNADAVTDKLFNNNIFTVAKRNVE
GQDMLYQSLKLSNGIWVLAELRIQPGNPNYTLSLKCRAAGVTQHVFQAYEIMLKN
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgacggattctaaatattttacgactactaagaaaggagaaatatttgaactcaaggca
gaactcaacagtgacaagaaggagaaaaagaaagaagcagtgaagaaggtgattgcatca
atgactgttgggaaagatgtcagtgcactctttcctgatgttgtcaactgcatgcagaca
gacaatttggaattaaagaagttggtgtacctctatctcatgaactatgcaaagagccaa
ccggatatggcaataatggcagtcaacacttttgttaaggactgtgaagatcccaatccc
ctcatcagagcgctggcagtgagaacaatgggctgtatccgtgttgataaaatcacagag
tatttgtgtgagcctctgcggaaatgtctaaaggacgaagacccctatgtacgaaagact
gctgctgtctgtgtagccaaactacacgatatcaatgcacaattggtagaagatcaggga
tttctggacactctgaaggatctcatatctgactccaatccaatggtcgttgcaaatgca
gtggcagcgttgtcagagatcgcagaatcgcatcccaacagcaatttgttggacctcaac
tttcagactatcaacaagctattaacagccttaaatgaatgcactgaatggggccagata
tttatcctcgattgtttagccaattatagcccgaaagatgacagagaggctcaaagcatc
tgtgaacgtgtaacgccgcgtttgtctcacgccaactcggctgtcgtcctgtccgctgta
aaagttctgatgaaattcatggaaatgttatcgaaggacttggattactatggcactttg
ctgaagaaactggctccccctctcgtgacactgctgtctgcagagccagagctccaatat
gtggctctccgcaacatcaacctcattgtacagaaaaggcctgagattctcaagcatgaa
atgaaggttttctttgtgaaatacaatgatcctatttatgtgaaactggaaaaactggac
attatgattcgattggcttctcaagccaacattgcacaggttttggcagaattgaaagag
tatgcaactgaagtagatgtggactttgtacggaaagctgtgcgtgcaattgggcgatgt
gcaattaaagttgagcaatcagcggagcgctgtgtgagtacgttacttgacctcattcaa
acaaaggtaaattacgttgtccaagaagctattgtggtaatcaaggacattttccgcaaa
taccccaacaagtatgagagtgttattgcaacactttgtgaaaatcttgactctttggat
gagcccgaagcaagagcagcaatgatatggatagtaggagagtatgcagaaagaattgac
aacgctgatgagctattggagagtttcctagaaggattccatgatgaaagcacacaggtc
caactacaacttttgactgccatagtgaagctattcttaaaaaaaccgactgagacacaa
gaactggtgcaacaggttttaagcttggcaacacaggattctgacaaccctgacttgagg
gaccgtggctatatatactggcgtctactttccacagatccggtggcagcaaaagaagtt
gtattggcagaaaaacctctgatttcagaagaaactgaccttattgaaccaaccctcctt
gatgaattaatttgccatattggaacactggcctctgtgtaccataaaccacccagtgcg
tttgtggaaggcagcagaggtgttcaacacaagaggctaccaccacgatctggatcaaat
gaaagtaccgagagtcctgatgtgactgcgacagcggcaccccaggctgctgagcaacag
cctgctgttattccttcccagggtgatcttctgggcgatcttttgaatcttgaccttggt
ccctctgtcaatgttcctcctatcccctcttcaacagttcagatgggtgccatggatctg
cttggcggtggattagacagtttgatgggcgatgagactgaagggcttggtggcgatatc
ggtggaagtccagcaattggcgctggttacgggactccagcagtaatgccagcgtccttg
aacgccacagtgggaggcggcttaggcgacctgtttgatctcgctggaggaatgggtgta
ccgtctggttcttacgtggcacctaaaactatttggttgcctgctgcaaaggccaaaggc
cttgagatttctggtacattttcacgtcgtatgggtcatatctatatggacctcaccctg
atgaacaaagccatgcaagtaatgtcagactttgccatccagtttaacaaaaatagtttt
ggaatggtcccagctgctcccctgcagatcaatgcaccacttactcccaaccagaccatt
gaggcttccctccttttgcacacagttggtgcagtaatgaagatggatcctctcaccaac
ctgcaggttgcagtgaaaaataatattgatgtcttctacttcagttgcctgtacccaatt
aatatattgtttttagaagaaggaaagctggatcgacaaatctttttggcaacatggaaa
gacattccaaatgaaaatgaagtacaatttcagatcaaggactgccaccttaatgcagat
gccgtcactgataagctctttaacaataatatatttactgttgcaaagaggaatgttgaa
ggacaagatatgttatatcagtctctgaaactgagcaatggaatctgggttttagcagag
ttacgaatccaacctggcaaccctaactacacgttatcgttgaagtgcagagccgcaggg
gtaacccaacatgttttccaggcatatgagataatgttgaagaattaa
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