Leucoraja erinaceus (little skate): 129709467
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Entry
129709467 CDS
T09122
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129709467 (tfip11)
Spliceosome [BR:
leri03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
129709467 (tfip11)
Other components
Complex C specific factors
129709467 (tfip11)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
CENP-K
DUF1281
Motif
Other DBs
NCBI-GeneID:
129709467
NCBI-ProteinID:
XP_055511857
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All DBs
Position
25:complement(18292496..18307529)
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AA seq
830 aa
AA seq
DB search
MSMAHLYGKDGTDDEVEMERFEISDWDLENEFNPDRVRHRQTKEDAIYGMWAENDSDDER
PSFGGKRSKDYTAPVNFISAGLRRTTDEENEKEKDSDESDEEKVKREEFQKEFAPQKLKT
GGFFKSHSKGFGGGYRTNQEIGTWEKHTKGIGQKLLQKMGYVPGRGLGKNAQGIIAPIEA
KMRKGKGAIGAYGSERTEQSLKDFPIVDSDEDADEEFLKEMSQWRKDPTGGKKKPKYNYK
TVEELKAKGTTSLGRKMATPQTELSQVKVIDMTGKEQKVYYSYSQITQKHDIPDDVQSLG
KDAKSEGFSLPELEHNLELLIEMTEQEIIQNDRQLQYEKDMVINISHENEKLSEVLEHEG
KIIDKLSHILQIVEDCEKRLQPSCENPLTLEECANIFEMLQEKYFEEYKMFDLAELSIAV
VFPLLREYFKAWNPLQDNEYGLEVMSKWRKLLERDQLQHGGCDMLSMDPYHRLMWEVWMP
SARNIVSQWLPRNCAPMVDFLENWMPVVPLWILDNILEQLVFPKLQREVESWNPLTDTVP
IHAWIHPWLPLMQMRLEPLYSPIRNKLSNALQKWHPSDSSAKLILLPWKDVFTPGSWEAF
MVKNIVPKLGMCVSEFVINPHQQHMDAFHWVMDWEDMISPSSLIGLLEKNFFGKWLQVLC
SWLSNSPNYEEITKWYLGWKSMFSDQVLAHPTVKEKFNEALDIMNRAVTSTVGGYMQPGA
RENIAYLTHTERRRDFQYEAMQERREAENMAHRGIGVTSTSIPMNFKDLIQAKAEEHNIV
FMPLMGKRHEGKQLYTFGRIIIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggcacatctgtacgggaaggacggcaccgacgatgaggtggagatggaacga
tttgagatctcggactgggacctggaaaatgagttcaacccggaccgtgtccgccaccgg
cagacaaaggaggatgcgatctacggcatgtgggccgagaacgactctgacgacgagaga
cccagttttggggggaaacgctccaaagattacacagctccggtgaacttcatcagcgct
ggactccgtcgaacaacagatgaggaaaatgaaaaagagaaggattccgatgaatctgat
gaagagaaggttaaaagagaagaatttcaaaaagagtttgcaccacagaaattgaaaact
ggtggcttttttaaatctcattcgaaaggattcggaggaggatatcggacaaaccaggaa
atcggcacctgggaaaaacacacaaaagggattggacagaagctgttacagaagatgggt
tacgtgcctggtagaggtcttggaaagaatgcccaaggtatcatagcaccaattgaggca
aagatgaggaaggggaaaggagcaatcggtgcttacgggtctgaacgaacagaacagtca
ctgaaagactttcctatcgttgactcggatgaggatgctgatgaggagttcctgaaagag
atgagccaatggcgaaaggatcccacaggtggaaagaagaaaccgaagtacaactacaaa
acggtggaggagctgaaggcaaagggaacaacaagcctaggcaggaaaatggctacaccg
cagactgaactctcacaagtcaaggttatagacatgacgggaaaggaacagaaagtgtat
tacagttacagccaaataacccagaagcacgacattcctgacgatgtgcagtcactgggc
aaagatgccaagtcagaggggttctccctcccagagctggagcacaatctggagctgctg
atcgagatgacggagcaggaaatcatccagaatgatcgccagctgcagtatgagaaggac
atggtcatcaacatctcccacgagaacgagaagctctcggaggtcctagagcacgagggg
aagatcatagacaagctcagccatatcctgcagatcgtggaggattgcgagaagagactg
cagcccagctgcgaaaacccattgacattggaagaatgtgcaaacatatttgaaatgttg
caggagaaatattttgaagagtataagatgtttgacctggcggaactttccattgctgtt
gtatttccactgctgagagaatactttaaggcctggaatcctttacaggataacgagtat
ggtttggaggtcatgtctaagtggcggaaacttctggaacgagaccaactgcaacatgga
ggttgtgacatgttgtctatggacccgtaccacaggttaatgtgggaggtgtggatgccg
tccgcacgtaacattgtgtcccagtggctgcccaggaattgtgctcccatggttgatttc
ttggagaactggatgcctgtggtccctctttggatattggacaatattcttgaacaattg
gtttttcctaaactacagcgtgaggttgaaagctggaatcccttgacggacacagtcccg
atccatgcctggatccacccctggctgcctctaatgcagatgcgccttgagccactatat
tctcccatccgcaataagctttccaatgcattgcagaagtggcatcccagcgactcgtct
gcaaaactgatcctgttgccctggaaagatgtgtttacaccaggatcctgggaagccttc
atggttaaaaatattgttccaaaattaggaatgtgtgtgtctgagtttgtaatcaatccg
caccagcagcatatggacgccttccactgggtgatggactgggaggacatgatctcacca
tctagcctcatcggattgcttgagaaaaatttctttggaaagtggttgcaggtgctgtgt
tcgtggctcagtaacagcccaaattatgaagagatcacaaaatggtacctgggctggaag
tccatgttctcggaccaggtcctggcccacccgaccgtcaaagagaagtttaatgaagcc
ctggacatcatgaaccgtgctgtcacctccacagttggtggctacatgcagccaggagct
cgagaaaacattgcctacctgacccacacggaacgccggagggacttccagtacgaggcc
atgcaggagcggcgtgaggctgagaacatggctcaccgcggcatcggagtcacatcaacc
tccatccccatgaacttcaaggacctgattcaggccaaggctgaagagcacaacatcgtc
ttcatgcctttgatgggcaaacgtcatgaggggaaacagctctacacatttgggcggatc
atcatctacattgacagaggggttgtgtttgtacagggagagaagacttgggtgccaacg
tcacttcagagcctcattgatatggctaagtaa
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