Leucoraja erinaceus (little skate): 129709602
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Entry
129709602 CDS
T09122
Name
(RefSeq) glutamate receptor ionotropic, kainate 3-like
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04080
Neuroactive ligand-receptor interaction
leri04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129709602
04082 Neuroactive ligand signaling
129709602
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
leri04040
]
129709602
Ion channels [BR:
leri04040
]
Ligand-gated channels
Glutamate (ionotropic)
129709602
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
129709602
NCBI-ProteinID:
XP_055512029
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All DBs
Position
26:3405880..3999367
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AA seq
907 aa
AA seq
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MILEYRTGLIFYLCWIRYSHGMPHVIRIGGIFELVESGTVGAEELAFKFAVNNINRNRTL
LPNTTLTYDIQRINIYDSFEASRKACDQLSLGVVAIFGPSHSSSSNAVQSICNALEVPHI
QIRWKHHPIDNRDSFYTNFYPDYSSLSYAILDLVQFLKWRTATVVYDDSTGLIRLQELIT
APSRYNIRLKIRQLPIDSSDTRPLLKEMKRGREFRIIFDCSFTMAAQILKQAMAMGMMTE
YYHYIFTTLDLFALDLDSYRYCGVNMTGFRILNTENLHVTSIIEKWSMERLQAPPSADSG
LLDGIMTTDAALTYDAVHIVSMSYQRAPQMTVNSLQCHRHKPWRFGSRFMNFIKEAQWEG
LTGRIIFNKTTGLRTDFDLDVVSLKEDGLEKVGTWDPINGLNITEMSRSRRSNITDSLTN
RSLIVTTVLEEPYVMFKKSDKPLSGNDRFEGYCIDLLKELSSILGFVYEIRLTQDGKYGT
PDERGQWNGMVKDLIDHKADLAVAPLTITYAREKVIDFSKPFMTLGISILYRKSNGTNAG
VFSFLNPLSPDIWMYILLAYFGVSCVLFVIARFSPYEWYDAHPCNPGSDIVENNFTLLNS
FWFGVGALMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANMAAFLTVERMESPIESA
DDLAKQTKIEYGAVRDGATMIFFQRSKISTFDKMWAFMSSRQQTTLVKSNEEGIQRVLAA
NYAFLMESTTIEYVTQRNCNLTQIGGHIDSKGYGIGTPLGSPYKEKITIAVLQLQEDGKL
HMIKEKWWRGSGCPEEENKEASALGIQNIGGIFIVLAAGLVLSVFVAIGEFIYKLRKTAE
REQRSLCSTMVQELQLSMTCQRRVKHKPQAPVMVKTEAVINMHTFNDRRLPGKDSLGCNT
GLSPVFP
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgattttggaatacaggacgggacttattttttacttgtgttggatacgatattctcat
gggatgcctcatgttattcgaattggtggaatcttcgaactagtggaaagtggcactgtg
ggagcagaagagttggccttcaaatttgccgtcaataacatcaacaggaacaggacactg
cttcccaacacaactctgacctacgacattcaaagaataaacatctacgacagttttgaa
gcatcccgaaaagcctgtgatcagctgtccttgggagtggtggcgatattcgggccgtct
catagctcctcatccaatgccgttcaatccatctgcaatgcgctggaagttcctcatatc
cagatccgttggaagcaccatcccatagacaacagggactccttctacaccaacttttat
cccgactattcctcgctgagctatgccattctggacctggtgcagttcctgaagtggagg
acggcaaccgtggtctatgatgatagcactggtctcatacgtttgcaagagttgataaca
gctccctccaggtacaatatccggctgaaaattcgccagcttcccatcgactcgagcgac
accaggcccctcttgaaggagatgaagcgaggacgggaattccgcattatattcgactgc
agcttcacaatggcggctcagatcctgaaacaagcgatggcaatgggtatgatgaccgaa
tactaccactacatttttacaactttggatctctttgccctcgacttggactcctaccgc
tactgtggagtgaacatgacaggattccgaattttaaacactgaaaacttgcatgtcaca
tcaatcattgaaaagtggtccatggagcggctccaagcaccgcccagcgcagattccgga
ctgctcgatggcataatgacgacagatgctgctctgacatacgatgcagttcatattgta
tcaatgtcctaccaacgagctcctcagatgacggttaactcgttgcagtgccatcggcac
aaaccttggcgattcgggagccgtttcatgaacttcataaaagaggctcaatgggaagga
ttaacaggccgaatcatatttaacaaaaccactggactacgcaccgattttgatctggac
gtcgtcagcctgaaggaagatggactggaaaaggttggaacctgggatccaatcaatggc
ttaaatatcaccgagatgtccagaagcagaagatcgaacataaccgattcgctgacaaat
cgctcactgattgtgaccacagtcctggaggaaccatatgtcatgttcaagaagtctgac
aagccactctctggcaacgaccgctttgaagggtactgcattgatctgctgaaggaactg
tccagtatcctgggattcgtttacgaaattcgactgacacaagatggaaaatatggaact
cctgatgagagaggccagtggaacggcatggtgaaggatctcattgaccataaagctgac
cttgccgtcgctccgctcaccatcacctacgcccgggagaaggtcattgatttctctaag
cccttcatgacgttggggatcagtattttgtaccgaaaatcgaatggaacaaacgctggt
gtcttctccttcctcaaccctctctctccagatatatggatgtacatcttattggcctac
tttggagtcagttgtgtgctctttgtcatagccaggttcagtccatatgaatggtatgat
gctcatccttgcaaccctgggtctgatatagtggagaacaacttcaccctgttgaacagc
ttctggtttggagttggagctcttatgcagcaagggtcggagctgatgcctaaagccctt
tcgacccggatcatcggtgggatctggtggtttttcactctcattatcatctcgtcctac
acggcaaacatggcagctttcctcaccgtcgagcgaatggaatcccccatcgagtccgct
gatgacctggctaaacaaacaaaaatagaatacggagcagtcagagatggagccaccatg
atcttcttccagagatctaagatttccactttcgataagatgtgggctttcatgagcagt
cggcagcaaacaaccctcgttaagtccaatgaggagggaatccagcgagttctcgccgcc
aattatgcttttctaatggaatccaccaccatcgaatatgtcacgcagaggaactgcaac
ctgacccagattggagggcacattgactcgaaaggctatggtatcggaactccccttggt
tcgccgtataaagaaaagataacaatcgcagtgctgcagcttcaggaggatggcaagttg
cacatgataaaagagaagtggtggcgaggcagtgggtgccctgaggaagagaacaaggag
gctagtgccctggggattcagaacatcggaggcatcttcattgtgctggcagcaggcctg
gtgctgtctgtgtttgtggcgataggggagttcatttacaaactacgcaaaaccgcagaa
cgtgaacagagatccttgtgcagcaccatggtacaggagctccagctgtctatgacgtgc
cagcggagggtgaaacacaaacctcaggcaccagtcatggtaaagaccgaagcagtgatc
aacatgcacacattcaacgaccgacggctgccaggcaaggacagtctgggctgcaacact
gggctgtctccagtgttcccctag
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