Leucoraja erinaceus (little skate): 129709728
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Entry
129709728 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: protein argonaute-4-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129709728
03036 Chromosome and associated proteins [BR:
leri03036
]
129709728
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129709728
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
129709728
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
129709728
microRNA pathway
RISC loading complex
129709728
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoMid
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
129709728
NCBI-ProteinID:
XP_055512238
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Position
26:complement(17968137..18024766)
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AA seq
863 aa
AA seq
DB search
MEPIAPGPPATTNLFQPPRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYEVDIKPEKRPR
RVNREVVDTMVRHFKMQIFGDRQPGYDGKRNMYTANPLPIGRERVDLEVTLPGEGKDQTF
KVSIQWVSVVSLQLLLEALAGRLNEVPEDCVQALDVVTRHLPSMRYTPVGRSFFSPPEGY
YHPLGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPVIEFMCEVLDIQNINEQNK
PLTDSQRVKFTKEIRGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLENGQAMECTV
AQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKAT
ARSAPDRQEEISRLVKSNSMIGGPDPYLKEFGIVVHNEMTEVTGRVLPAPMLQYGGRNKT
VATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCREEVLKNFTDQLRKXSKDAGMPIQ
GQPCFCKYAQGADSVEPMFKHLKMTYVGLQLIVVILPGKTPVYAEVKRVGDTLLGMATQC
VQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQRPSVFQQPVIFLGADVTHPPAGDG
KKPSIAAVVGSMDGHPSRYCATVRVQTSRQETSQELLFSQEVIQDLSNMVRELLIQFYKS
TRFKPTRIIYYRGGVSEGQMKQVAWPELIAIRKACISLEEDYRPGITYLVVQKRHHTRLF
CADRSERVGKSGNVPAGTTVDSTITHPSEFDFYLCSHAGIQGTSRPSHYHVLWDDNCFSA
DELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKDHDSAEGSHISGQSNG
RDPLALAKAVQVHHDTQHTMYFA
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggagccaattgcgccaggtcctcctgcaacaaccaatttgtttcaacctcctcgcagg
ccaggacttggtacagttgggaaacctattcgcctgttggccaatcattttcaggtccaa
atccctaaaattgatgtttaccactatgaagtggatatcaaaccagagaaacgtccccgc
agggtcaacagagaagtggttgatactatggtacgacacttcaagatgcaaatttttggg
gatcggcaaccaggttatgatgggaaaagaaatatgtacactgcaaatccattaccaatt
gggcgagaaagggttgacttggaagtgaccctcccaggagaaggtaaagatcaaacattc
aaggtttctatacagtgggtatcagttgtcagtctgcagttacttttagaagctttggca
ggacgtcttaatgaagttcccgaggattgtgtccaggcacttgacgttgtcacgaggcat
cttccctcgatgaggtacaccccagtaggtcgttcctttttctctcctccagagggttac
tatcaccctttgggaggaggtagagaagtctggtttggtttccatcaatctgttcgacca
gccatgtggaatatgatgttaaatattgatgtgtctgcaacagcgttttacagagctcaa
ccagtcattgagttcatgtgtgaggtattagacattcagaatatcaatgagcaaaacaaa
ccactgactgactcgcagcgtgtgaaatttaccaaagaaataagaggtctaaaagtggag
gtgactcattgtggacagatgaaaagaaaatatagagtgtgtaatgtcacccgacggccg
gccagtcaccagacgtttcctctacaactggaaaatgggcaagcaatggagtgtacagtg
gcacaatacttcaaacaaaaatacaatttgcaacttaaatatccccacctaccctgtcta
caagtgggacaagagcagaagcacacctatctgccacttgaggtatgtaacattgtagct
gggcaacgttgtatcaagaaactaacagacaatcaaacatcaacaatgatcaaagcaaca
gctcgatcagcgcccgaccgacaagaggagattagtcgtctggtgaagagtaacagtatg
attggcgggccagatccatatctaaaggagtttggtattgtcgttcataatgaaatgact
gaggtcacaggtcgagtgctgcctgcaccgatgctccagtatggaggcaggaataagact
gttgctaccccaaaccagggggtatgggacatgagaggcaaacaattctatgctggcatt
gagattaaagtctgggcagttgcctgttttgcaccacagaagcagtgccgggaggaagtt
ttaaagaattttactgatcagttgcgtaaantttccaaagatgctggaatgcctattcag
ggacagccgtgtttctgtaaatatgcacaaggtgcagacagtgtagaaccgatgtttaag
cacctgaagatgacttatgttggtctgcaattgattgtagttattctgcctgggaagact
cctgtttatgctgaagtgaaacgtgtgggtgacacattgttgggaatggccacacaatgt
gttcaggtgaagaatgtagtcaaaacatccccgcagacattatcaaatctttgtttgaag
attaatgcaaaacttggtggaatcaataatgttcttgtacctcaccagcgaccatctgtg
ttccagcagccagtcatctttttgggagcagatgtcacacacccaccagcaggagatggc
aagaagccctcaattgcagcagtggttggtagtatggatggacaccctagtcgatactgt
gcaacagttcgcgtgcagacatcaaggcaagaaacatctcaggagcttctgtttagtcaa
gaggtaatccaggatctgtccaacatggtgcgtgagcttctaatccagttttacaaatca
acccgcttcaaaccaacacgtataatctactacaggggtggagtatccgaaggacaaatg
aaacaggttgcctggcctgagcttattgctattcgaaaagcctgtattagtttagaggag
gactacagacctggcataacataccttgttgtgcagaaacgacatcatacgcgactattt
tgtgctgatagaagtgaaagggtgggtaaaagtggcaatgttcctgctggcacaactgtt
gatagcaccatcacccatccttccgagtttgatttctacctttgcagtcatgcaggaatt
cagggtactagtcgcccttcgcactatcatgtcctgtgggatgacaactgcttttcagct
gatgaattgcagcttttgacgtatcagctatgtcatacttatgtgcgatgcacacgctct
gtctcaatccctgcacctgcgtattatgccagattggttgcatttagagcaagataccat
ctcgtcgacaaggatcatgacagtgctgaaggaagccacatatctggacagagcaacgga
cgggatccactggcattggccaaggctgtacaggtccaccacgacacccagcatacgatg
tactttgcataa
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