Leucoraja erinaceus (little skate): 129709754
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Entry
129709754 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03013
Nucleocytoplasmic transport
leri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129709754
03015 mRNA surveillance pathway
129709754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129709754
03041 Spliceosome [BR:
leri03041
]
129709754
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129709754
Spliceosome [BR:
leri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
129709754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
129709754
NCBI-ProteinID:
XP_055512287
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All DBs
Position
26:19810933..19898315
Genome browser
AA seq
896 aa
AA seq
DB search
MGVPPQTDKMDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMHKVNLEVIKPW
ITQRVTEMLGFEDDVVIEFIFNHLEEKNPDAKLMQINLTGFLNGKNARMFMGELWPLLLS
AQENIAGIPSAFLEQKKEEIKQRQIEQEKLATMKKQDEEKEKKDKEDKENKEKRDRSRSP
KRRKSRSPSPRRRSPARRERKRSPSRSPRRRTRSASRSASPVSTVKKPEQMSPEPDLSLK
ERKESPAPEATSTSDILKEIKPSTPEVKETLLDQPIKKEKERKERNRHRSRSRSKSKSRS
RSRSHSRPRRRPRSRSRSYSPRRRPSPRRRSPPRRRSPPRRLPPPPPPSRHRRSRSPIRR
RRSPSVSSSGSSSSSSSSPKKTKRISISPPRKPRRSSPSPATPPRRRHRSPVTTTSPAHK
GPRLSSPHVNRSRKGYTSVSPARPAPKRKGSVKHESVSPPKPRRSDPSDSEDDKGGKAAG
VESVQQRRQYRKQNQQTTSESGSSSSSEDEAPKRSTAKNGEVRRRRHRSLSRSMSPSPAM
RKRHFSPRMPLGKGWHFPVAKRRRRSPSPPPRRRRTPSPPRRRRSPSPLRRRSPSPPQRR
RSASPRRYSPPIQRRYTPSPPPRRRASPSPAPKRRSSPSPSSRRRRGSPPSRSNRDVRSP
PPHKRHSPSPRPRPIRGSVSPPPARRVSMSPPPPQRRHCPPSPSNRPIRRVSRTPEPKKP
KKVSPNLQVVRRATSSRSASRSPEPAPKKRPVTSVSRSQSASRSPTPVLPPPPVKKPKSA
SVSPSPLKVSDQEAGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAVAPVAAVEEKVEPAE
APAKSPQPEASEPTKESESEDENLDDLEKHLREKALRSMRKSSSLATIMRERTEIN
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgggagtccctccacagacagacaagatggacgcggggtttttccgtggaaccagtgca
gaacaagacaatcgattcagcaacaaacagaagaaacttctaaaacagttgaaatttgca
gaatgtcttgaaaaaaaggtggatatgcataaagtgaacctggaggtgatcaagccatgg
attacccagagagtgacagaaatgcttgggttcgaggatgatgttgttattgagttcatc
ttcaaccatcttgaggagaagaacccagatgcaaagctgatgcagattaacttaaccggg
ttcttgaatggaaagaatgcaagaatgttcatgggagagttgtggccattgctgttgagt
gcccaggaaaacattgcaggaatcccttctgcttttctggaacagaagaaagaagaaatc
aaacagcgacagattgaacaggaaaagctagctaccatgaagaagcaagacgaagagaag
gaaaaaaaggataaagaagacaaagaaaacaaagaaaagagggaccgctccagaagtcca
aagaggcggaaatcaagatccccatctcccaggaggcgatctccagcaagaagggagaga
aagcgttctccatctaggtctcctcgtcgtaggaccagaagcgcgagtagaagtgcttca
ccagtgtctacggtcaagaagccagaacaaatgtcacccgagccagatctctcactaaaa
gaaagaaaagaatcccctgcaccagaagcaacgtcaacaagtgatattctgaaggaaatc
aaaccctcaacaccagaagttaaagaaactttattagatcaacctattaaaaaagagaag
gaaagaaaggaaagaaatcgtcatcgctcacgttcacggtcaaaatcaaagtctaggtcc
cgttcacgttctcattcacggccaaggaggcgtcctaggtcccggtcaaggtcctattca
cctcgaagacggcccagtccccgacggaggtctccaccacgacggaggagtccaccaagg
cgtttgccaccacctccgcctccttccaggcacagaaggagtagatcacctataagaagg
cgtcgatctccctcagtttcatcctcgggcagtagttcctcttcctcttcctctccaaag
aagaccaaacgcatatcaatcagtcctccccgcaaacctcgccgatcttctccatcacct
gctactcctcccaggagacgacatcgatcacctgtgactacgacaagtcccgctcataaa
gggccgcgtttgtcttctccacacgtgaatcgttcaaggaaaggttacacttctgtttct
cctgctagaccagcaccaaaacggaaaggtagtgtgaagcatgaatccgtttctcctcct
aaaccaagaagatcagatccatcagattcagaagatgataaaggaggcaaggctgccgga
gtagaatccgtgcaacagcgtcgccagtatcgcaaacagaaccaacaaaccacttctgag
tccggatcatcttcctcatctgaagatgaagcaccaaaacgttcaactgcaaagaatggc
gaagttcgaagaaggcgccatcgttccttgtcacggagtatgtctccttctcctgctatg
cgaaaaaggcacttttcgccacggatgccgcttggaaaggggtggcacttcccagtggcg
aaaaggaggaggagaagcccatcaccaccgccgagacgccgtcgtactccgagtcccccg
agaaggcgtagatcaccgtctccactaagacgcagatcgccatctccaccacaacgtcga
cgttcagcctcacccagacgctattcccccccaattcagaggaggtatactccatcacca
ccacccaggaggcgggcatctccgtcaccagcaccaaagcgccgtagttctccctctccc
tcgtcccggcgtaggagaggatcaccacccagtagatccaacagagatgtccgatcaccg
ccaccacacaaacgccactcaccatctccaagacccaggccaatacgtggatctgtgagt
ccaccaccagcacgaagagtatcaatgtcaccaccaccaccacaacgtcgtcattgtccc
ccatccccgagtaataggccaatccggcgtgtttcacgaacaccagaaccgaagaaacct
aaaaaggtctcgccaaatctacaagttgtgcgaagggctacatcatccagatctgcatct
cgatctcctgagcctgctcccaaaaaaaggccagtgacttcagtctccagatcacaatct
gctagtaggtcaccaacacctgtccttccaccaccaccagttaaaaagccaaagagtgct
tcagttagcccatctcctctcaaggtctctgaccaagaagctggagggaagaagaagaag
aagaagaaggacaagaaacacaagaaggacaaaaaacacaagaaacacaagaagcataag
aaagaaaaggctgctgtggcaccagttgcagctgtagaagaaaaggttgaacctgcagaa
gctccagcaaagtcacctcagccggaagcttcagaacccacaaaggaatcagaaagtgaa
gacgaaaacctagatgatctagaaaagcatctgcgagagaaggctctgcgttcaatgaga
aaaagctcaagcctcgccaccatcatgagggagagaactgaaataaactaa
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