Leucoraja erinaceus (little skate): 129709772
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Entry
129709772 CDS
T09122
Symbol
yars1
Name
(RefSeq) tyrosine--tRNA ligase, cytoplasmic
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129709772 (yars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
leri01007
]
129709772 (yars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
leri03016
]
129709772 (yars1)
03029 Mitochondrial biogenesis [BR:
leri03029
]
129709772 (yars1)
Enzymes [BR:
leri01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
129709772 (yars1)
Amino acid related enzymes [BR:
leri01007
]
Aminoacyl-tRNA synthetase
Class I (A)
129709772 (yars1)
Transfer RNA biogenesis [BR:
leri03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129709772 (yars1)
Prokaryotic type
129709772 (yars1)
Mitochondrial biogenesis [BR:
leri03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
129709772 (yars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA_bind
Motif
Other DBs
NCBI-GeneID:
129709772
NCBI-ProteinID:
XP_055512314
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All DBs
Position
26:complement(21252027..21278842)
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AA seq
527 aa
AA seq
DB search
MGEKKDVQEKINLITRNLQEVLGEDKLHSILQERDLNVYWGTATTGKPHIAYFVPMSKIA
DFLKAGCEVTILFADLHAYLDNMKAPWELLQLRTQYYEHIIKAMLESIGVPTEKLKFVKG
TDFQLSREYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVD
AQFGGIDQRKIFTFAEKCLPALGFAKRIHLMNPMVPGLTGGKMSSSEEESKIDLLDKRED
VKKKMKRAFCEPGNVENNGILSFVRHVLFPLHEEFVILRDEKFGGNKTYLEYSNLENDFR
DQTIHPGDLKSSVEVVLNNLLDPIRKKFQTPEMQQLIKGAYPTPKKQPKGTTKGPASENY
EVIPSRLDIRVGRIVSVENHPDAESLYVEQVDIGEAQLRTVVSGLVPYVAAEDLLNRNVV
MLCNLKPQKMRGIESQAMLLCASIEGEKRKVEPLNPPEGSEPGERVFIEGFENGPADDEL
KPKKKIFEKLQVDFKISDDCTAQWQQKNFMTKLGAVTCKSLKGGSIS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaaagaaagatgttcaggagaaaatcaatcttatcacaagaaacttgcaggaa
gtcttgggtgaggataagttgcattccattctgcaagaacgcgacttgaatgtgtactgg
ggaacagctacgactggaaaacctcacatagcatacttcgtgccaatgtcaaagattgct
gacttcctgaaagctgggtgtgaggtaactattttatttgctgatttgcatgcttatttg
gacaacatgaaagctccctgggaacttctccagttgagaacacagtactatgaacatatc
ataaaagcaatgctggaaagtataggtgtaccaacagaaaagctcaagtttgtgaaagga
acagattttcagttaagcagggaatacactttggatgtctacagattgtcctctgtagtg
actcaacatgatgccaaaaaggctggtgctgaagttgttaaacaagtggagcatccactt
ctcagtggcctactgtaccctgggttacaggccttggatgaagaatatctgaaggttgac
gcacaatttggtggtattgatcagaggaaaatattcacatttgcagaaaagtgccttcca
gctcttgggtttgccaagcgtattcatttaatgaaccctatggtcccaggtctgactgga
ggaaaaatgagctcatctgaagaggaatccaaaattgatttgttggacaaaagggaagat
gtaaaaaagaagatgaaaagagcattctgtgaacctggcaatgtggagaacaatggcatt
ttgtcatttgtaaggcatgtcttgtttccattgcacgaagagtttgtaattttgagagat
gaaaagtttggtggcaacaagacctatttagaatatagcaatcttgaaaatgacttccgt
gatcagactattcaccctggagatctaaagagttctgtggaagttgtgttaaataatctc
ttggacccgatcaggaagaaatttcaaacacctgagatgcagcaactaatcaaaggagct
tatcccacacctaagaaacaaccaaagggaactaccaaaggaccagcttctgagaattat
gaagttataccttccaggcttgatattcgagtcggcaggatcgtcagtgtggagaatcat
cctgatgcagagagtctgtacgtggagcaagtggacattggagaagcacagctacgaaca
gttgtcagtgggttagtgccgtacgtcgctgctgaggatctcctgaatcggaacgttgtc
atgttgtgtaatctgaagccacagaagatgcgaggaattgaatctcaagccatgttgctt
tgtgcatccatagagggggagaagcgtaaagtggagccattaaatcctccagaaggctct
gaaccaggagagcgggtgttcatagagggatttgaaaatggcccagcagatgatgaactg
aaaccaaagaaaaaaatatttgaaaagttacaggttgatttcaagatttcagacgactgc
acagcccagtggcaacagaagaactttatgacgaaacttggtgctgttacatgtaaatct
ttaaaaggcggaagtataagttaa
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