Leucoraja erinaceus (little skate): 129709805
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Entry
129709805 CDS
T09122
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129709805 (arid1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129709805 (arid1ab)
03021 Transcription machinery [BR:
leri03021
]
129709805 (arid1ab)
03036 Chromosome and associated proteins [BR:
leri03036
]
129709805 (arid1ab)
Transcription factors [BR:
leri03000
]
Eukaryotic type
Helix-turn-helix
ARID
129709805 (arid1ab)
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129709805 (arid1ab)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129709805 (arid1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
129709805
NCBI-ProteinID:
XP_055512379
LinkDB
All DBs
Position
26:22565186..22651376
Genome browser
AA seq
2060 aa
AA seq
DB search
MAAPVSALRDSDISQAKPGDLAALKAGTGPIPAAEQEHHLPGNGSESGSGARDTFSNHRL
SAASAPGEHSDEDNGHQPHGEPDGASSEHSNGGGGSVEPEPGRAAAASLGLLTSGDQRFD
HSSNNGGGSGPMANANPAPSPGPAAVPAAGYGYNHYRGPFHQHGGQQSPGMGAALHPGGL
DSFQPNSHEAFGHYNNYTAAYPARSGYTNQGYGLNSPRAGAAGPKASASNIAPSFQRFGG
QHQQSAPVPGLQQQSQTASSTPTLNQLLTSPSGARAFTNYNQAHQDYNSSQELAKGGELG
AQYASAGWAAAQQRIHHPPISPGNSGQPLLRTQPTSPMDQMGMKRPQPYGGSNNPYAQQA
PPQQSGPYPGQPYGPPAPQRYPVGVQGRTQGTMGGALQYPQQMPPYSQQSAGSYCQQGQT
PYYNQQQPSYPQQQRFPLQQQDLSQEAFATQAPQGLTSNKPNQEELTLMQQGRPSSLPDL
SGSIDDLPTGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGS
PASVTQSRSGPLSPAAVPGNQMPPRPSSGQSDGILHPTMNPSAMGQDRGYLQRPPQLPQY
NSPQTGSALSPRQSSGSQMHAAMSPYQQNNSGNYGPQGAQYAPQGGYPRQPNYNAMSSAN
YNLGGTMNAMSAGNQMHGQGPAPPYAGMPPGRIGPVAMGNRPYGGNMTQNTANLSAQMTS
GMCPPPTMNRKAQDTAVAAMHAAANSVQNRQSTYPTMNQGGMMGSASPYNQGMNSMAGMM
NPQGSPYSMAGNMANSSAGMAPSPEMMALGEGKLPPTQKANNKADGTAKSDTKSKKTSSS
TTTNEKIAKLYELGGEPERKMWIDRYFAFMEEKGTMMMNLPAVGRKPLDLYRLYMSVKDI
GGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLFAFECKIERGEDPPADIFSAT
DSKKQQPKIQPPSPAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPVSTPHSHMQPMPGSRN
NSVSVQDPFADTSDPAFQKRTAVPQNPTYPPTMNTTDLMVRMPYEPNKDPFGGMRKAPGQ
DPFMSTGPSPNAGMGDPYNRPPATGMGPRQQYAYGSGFERRSEHGMGPEGTVQPSVVSVN
ADSSMYSPNRYQAQQRHDPYGSQYSGQGAPAGQSYSNQQPGMFPQQQNFKRQMDGTYGPP
AKRHEGEIYGMAYTAQQSQQDMYNQYSNAYPGTDRRPVQNQFPFQYGRERMQGPPGATTS
QPVPSQMMGGPLQSPPEGPQGTVWPGRNDMTYNYPNRQGPGTPPQAPAYHSMNRSEEMIG
PDQRMNHEGQWASHVNQRQQSFTPSAPLPPITRPSQSTYQTPPSVPNHISQVSSPAPMQR
PLENRTSPSKSPFIYSGMKMQKVGPPMPASHISGPSAQPPLIRRDITFPPGSVEASQPAL
KSRRRLTTKDVGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSSVATFTLSQLPGFL
ELLVEYFRKCLIEIFGILKEYEIGHPGQKTLLDPNLFGKVKEPSELETEGGREYISEEEM
AANLTQDATAIENAEKNPKHVSKFDRLPVKMVIKDDLFVVDNSDKLGRVQEFDSGLLHWQ
IGGGDTTEHIQTHFESKTQVPLRKRTMTHKGSTKRHAAESKKGTEGIAEATVSGEESEKS
ITATIDDVLSARPGSLNKEAVNGSLAGNTDNNKFPFAIHQAQSHKNIKILEDEPCSRDEV
PLCMMADWQDSLAKRCICISNIIRSLSFVPGNDAELSKHPGLLLILGKLVLQHHEHPERK
QTPLTYEKEDEEDEGVSCDRDEWWWDCLEVLRENTLVTMANISGQLDLSLYPESICLPLL
DGLLHWAVCPAAEAQDPFPTLGPNSMLSPQRLVLESLCKLSIQDNNVDLILATPPFSRLE
KLYGILVRLIGERKSQVCREMCMVLLANLAQGDSLAARAIAVRKGSISNLLGFLEDSLAA
TQLQQSQPSLMHLQTAPIEPTSMDMMRRAAKALLAMAKVEENHSEFTLHEARLLDISVSP
LLNSLVTNVICDVLFMIGQS
NT seq
6183 nt
NT seq
+upstream
nt +downstream
nt
atggccgctccggtcagcgccctcagagacagcgacatcagccaggccaagccgggcgat
ctggcggcgctgaaggcgggcactgggcccatccccgccgccgagcaggagcaccatttg
ccaggcaatggctcggagtccggctcgggcgccagggacaccttcagcaaccaccggctg
agcgcggcctcggcgcccggcgagcacagcgacgaggataacggccaccagccgcacggc
gagccggacggggcctcctcggagcacagcaacggcggagggggctcggtggagccggag
cctggccgggctgccgcagccagcctgggcctcctgaccagcggcgaccagcgtttcgac
cattccagcaacaacggcggaggctccgggcccatggccaacgcgaaccctgcgcccagt
ccaggcccggccgccgtgccggccgccggctacggttacaaccattaccggggcccgttc
caccaacatggcggacaacaaagccccggcatgggggcagcgctgcaccccggcggcctc
gactccttccaacccaattcacacgaggccttcggccactacaacaattacaccgccgct
tatccggcccgcagcggctacaccaaccagggctacggtctcaactcgccgcgggccggg
gcggccgggcccaaagcctcggcctcgaatattgccccgagtttccagcggttcggaggg
cagcaccagcagtcggcgcccgtcccaggcctccagcaacagtcgcagacggcttctagc
acaccgaccctcaaccaactgctcacctctcctagcggggccagggcctttactaactat
aaccaggcccaccaggactataatagcagccaagaactggccaagggaggcgagctgggc
gcacagtacgcgagcgcaggctgggcagcagcgcaacaaagaatacaccatccgcccatc
agtcccggcaacagcgggcagcccttgctcaggacccagccaactagccctatggaccag
atggggatgaagagacctcagccttatggcggcagcaataatccatatgcacagcaggca
cctccgcaacaaagcggaccttacccaggacaaccgtatggacctccagcgcctcagcgc
tatcccgtgggtgtgcagggccggacccaaggcaccatggggggcgcgctgcagtaccca
caacagatgcctccttacagccagcagagtgcaggcagttactgtcagcagggccagaca
ccatactacaaccagcaacagccttcataccctcaacaacaacggttcccactacagcag
caggatttgtctcaggaagcatttgccactcaggctcctcaagggttgacttccaacaaa
cccaaccaggaggagctgaccctcatgcagcaggggcgtccatctagtctgccggatctg
tctggttccatcgatgatttgccgaccggaacagaaggagcgctgagcccaggtgtgagt
acatctggaatctccagcagtcaaggagagcaaagtaaccctgcacagtcacctttctct
cctcatacttccccccatctgcctggaatccgtggcccatctccttcacctgtaggatcg
ccagctagtgtaacacagtccaggtcggggccgttgtccccagcagctgtaccaggtaac
cagatgccaccccgcccttcaagtggacaatctgatggaattcttcaccccaccatgaat
ccatctgcgatggggcaggaccgaggctatttgcagagacctccccaactgcctcaatac
aactccccacaaacagggtcagcactgtccccacgtcagtcatctgggagccagatgcat
gctgcaatgagcccatatcagcagaataactctggaaattatggacctcaaggtgctcag
tacgcacctcaaggaggctaccccagacaacccaactataacgcaatgtccagtgcaaac
tacaacttaggaggcaccatgaatgccatgtctgctggcaaccaaatgcatggtcagggt
ccagcaccaccttatgctggaatgccgcctgggagaataggccctgtagcgatgggtaat
cgtccatatgggggcaacatgacccagaacacagcaaatctatcagcacaaatgacctca
gggatgtgcccgccaccaactatgaaccgcaaggctcaggacacagcagttgctgcaatg
cacgcagcagcaaattcggtacagaataggcaatctacttatccaactatgaatcaagga
ggtatgatgggttctgcctcgccttacaatcaaggcatgaacagcatggcagggatgatg
aatccacagggttctccatattccatggctggaaacatggcaaatagttctgcaggtatg
gctcccagtcctgagatgatggcgcttggggaaggaaaattaccaccaacacagaaagcc
aacaataaagcagatggaacggcaaagtctgatactaagtcgaagaagacgagctcttcc
acgaccactaatgagaaaattgcaaaactgtacgagttgggtggggagccagagcgaaag
atgtggattgataggtactttgcctttatggaagagaagggcacgatgatgatgaatctc
cctgcagttggcaggaaaccgctggacctttatcgactctatatgtcagtcaaagatatt
ggggggcttacgcaggtgaataaaaacaaaaaatggcgtgaattggccaccaatctgaat
gtgggcacttcaagcagtgcagccagctctctgaagaaacaatatatccagtgtctgttt
gcctttgagtgcaagattgaacgaggagaagatcctccagcagacatcttttcagccact
gattccaaaaagcaacaaccaaagatacaacctccttctcctgctggttcaggttcactg
cagggccctcagaccccacagtccaccagcagctcaatggcagaaggaggagatttaaaa
ccaccaacgcccgtctcaacaccccatagccatatgcagccaatgccaggatccagaaac
aactctgtgagtgtccaggatccatttgcagacaccagtgacccggctttccaaaagagg
accgctgttcctcaaaacccaacctacccccccaccatgaataccacagacctaatggtt
cgtatgccatatgaaccgaacaaggatccatttggtgggatgaggaaagctcctggacaa
gatcctttcatgtcaactggaccctctcccaatgctggaatgggagacccttacaatcgc
cctcctgcaacaggaatggggccacgtcagcagtatgcatatggatctggatttgaaagg
aggtcagaacatggaatgggcccagaggggacagtacaacctagtgtggtgtcagtcaat
gcagattccagcatgtattctccaaatcgttaccaagctcagcagcggcatgatccttat
ggaagtcagtactctggacagggagctccagctggacagtcttattctaaccagcaacct
ggaatgtttccgcaacagcaaaacttcaagcgacaaatggatggaacgtatgggcctccg
gccaagaggcacgagggtgaaatatatggaatggcctacactgcccagcaatcgcagcaa
gatatgtataaccagtatagcaatgcctatccaggtactgatcgccggccagtgcagaat
cagtttccatttcagtatggcagagagagaatgcaaggtccccctggtgcaaccacttca
cagccagtgccctcacagatgatgggaggtccattgcagtcaccaccagaaggaccacaa
ggaacggtgtggccggggcgaaatgacatgacgtacaactatcccaaccgacaaggtcct
ggcactccaccacaagctccagcatatcacagcatgaatcgttccgaggagatgattgga
cctgatcagagaatgaaccatgaaggccaatgggcttcccatgttaaccagcgtcagcaa
tctttcaccccttctgcacctcttccaccaattacaagaccatcacagtccacctaccaa
actcctccgtcagtgccaaatcatatttcccaagtgtccagtccagctcccatgcagaga
ccactggaaaaccgcacttcacccagcaaatcgccatttatctattcaggaatgaagatg
caaaaagttggaccccccatgcctgcatctcatatttctgggccctctgcgcagccacca
ctgataagacgagacatcacgttccctcctggttcagttgaagcatctcaaccagccctg
aaatctcgccggagactcaccaccaaggacgttggcaccccagaggcttggcgggtgatg
atgtcccttaaatctggcctcctggctgaaagtacatgggccttggacaccattaatatt
ttattgtacgatgatagcagtgtagccaccttcacgttatctcagttacccggattcttg
gagcttctggtggaatatttccggaaatgcttgattgaaatatttggaatcctgaaggag
tatgagattggacatcccggccaaaagacactcctggatccaaatctgtttgggaaagta
aaggaaccatcagagcttgagacggagggaggcagggaatacatcagtgaagaggaaatg
gcagctaatctaactcaagatgcaactgcaattgagaatgcagaaaagaatcccaagcat
gtcagcaagtttgacagacttcctgtgaaaatggttataaaggatgatctatttgtggta
gataattcagataaattgggcagggtacaggagtttgacagtggtttgctacactggcag
attgggggaggcgacactacggaacacatccaaacacactttgagagtaagacacaggta
cccctccggaaacgaaccatgacccataaaggatccacaaaaaggcacgcagctgaaagc
aaaaaagggaccgaaggaatcgctgaggcaacagtgagtggtgaggagtccgagaaaagc
ataactgcgaccatagatgatgttctgtcagcgaggcctggctccttaaacaaggaagca
gttaacgggtcattagcgggaaacacagataacaacaagtttccttttgctattcatcag
gcacaaagtcataaaaatatcaaaattctggaggatgagccgtgcagccgggatgaggtg
ccgttatgtatgatggccgactggcaggactctttagcgaagcggtgtatttgtatatca
aacattatccgcagcttgtcgtttgtgcctgggaatgacgcagagttgtcaaagcaccct
ggcttgctgcttatcttgggcaagcttgtattgcagcatcacgagcacccagagcggaaa
caaacgccgttaacatacgagaaggaggatgaggaggatgaaggtgtaagctgcgatcgt
gatgaatggtggtgggactgtttagaagtattacgggaaaacactcttgtcacaatggcc
aatatttctgggcagttggacctgtctctgtatccagagagtatctgcctgccacttctg
gatggattgttgcactgggctgtgtgtcctgcagcggaggcccaagaccccttcccaacg
ctaggccccaattcaatgctctctccccagagactcgtcctggagagcttgtgtaaactt
agtatccaggacaataatgtggaccttatcctggcaacgcctccctttagccgcttggag
aaactttatgggatactggtccggctcattggggaacgcaaaagccaggtgtgccgtgaa
atgtgtatggtactgttggcaaatctggcgcaaggagacagcttggctgccagagcaatt
gccgttcgtaagggaagcatcagtaacctactgggctttttggaggatagtcttgcagcc
actcaactccagcagagtcagcccagcctgatgcacttgcaaactgcacctattgagcca
accagtatggacatgatgcggcgggcagccaaggccctgctagcaatggcaaaagtagaa
gaaaaccactctgagttcacgttgcatgaggcacgactgctagatatctctgtatcgcct
ctcctgaactcactggttacaaatgtaatttgtgatgtactcttcatgatcggccagtca
tga
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integrated database retrieval system
