Leucoraja erinaceus (little skate): 129709880
Help
Entry
129709880 CDS
T09122
Symbol
matn1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
leri04990
]
129709880 (matn1)
Domain-containing proteins not elsewhere classified [BR:
leri04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
129709880 (matn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
cEGF
EGF_CA
EGF_3
EGF
EGF_LRP2
Plasmod_Pvs28
hEGF
Motif
Other DBs
NCBI-GeneID:
129709880
NCBI-ProteinID:
XP_055512502
LinkDB
All DBs
Position
26:27922728..27948396
Genome browser
AA seq
495 aa
AA seq
DB search
MMGLCTGLLLSALLLVQVNGVPKPKVKPGPQTPAGLCRTKPTDLVFIIDSSRSVRPSEFE
QVKVFVSQVIESLSIGPNATRVGVVNYASTVNPEFTLSAHRNKAAVLRAVSQIKPLSSGT
MTGLAINFATNIAFNEASGARVKSNAASKVAIIVTDGRPQDRVRDPATRAKQKGIEIFAI
GVGRAELNSLREIASEPLEDHLDYVESYSAIEKLSKKFKEAFCVVDLCASGDHDCEQVCV
SVPGSYKCACNEGFTLNPDGKTCGTCSSGAVDLGFVIDGSKSVRPENFQLVKKFINQIVD
SLDIGDQQARVALVQYSSTVRTEFPLNKFNTKQSIKAAVKRMEYMERGTMTGLALQHLSE
KVFLPSLGARDNIPKVGIVFTDGRSQDYINSFAEKIKNQGIKMFAIGVGNALEEELRIIA
SDPVKDHYHYTADFKTMNQIADKLQVKICAAPKDPCACESLVEFQRKVEKIIKTLTSKLG
TFAKKLAALENRLLV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgatgggactttgcactggactgctcctgtctgccttactcctcgttcaggtcaatggg
gtgcctaaacctaaagtaaaacccggtccacagactccagccggtctttgccgaactaaa
cccaccgatcttgtcttcatcatcgacagctctcggagtgtccgcccttctgaatttgaa
caggtgaaagtgtttgtgtcgcaggtcatcgaatccctgagcatcggcccaaatgccacc
cgggttggagtggtcaactatgccagcacggtcaaccccgaattcaccctcagcgcacac
cgcaacaaggccgccgtcctgcgggcagtctcccagatcaagccactttcctccggcacc
atgactggcttggccatcaattttgcgaccaatatcgctttcaatgaggccagcggagca
cgggtgaaatccaacgctgccagcaaggtagccatcattgtgaccgacggccgaccccag
gaccgcgtgcgagatcccgccacccgtgccaaacagaaaggcattgagatctttgccatc
ggtgtgggcagggcagagctgaactccctccgcgagatcgccagcgagcctctggaagac
cacctggactacgtagagagctacagtgccatcgaaaaactttccaaaaaatttaaggaa
gctttctgtgtggtggatctgtgtgcaagcggcgaccatgactgtgagcaggtgtgcgtg
agtgttcctggctcttacaagtgtgcctgcaatgaaggattcacactcaacccagatgga
aaaacttgcgggacttgcagttcaggagctgttgatttaggtttcgttatcgatgggtca
aagagtgtgagacctgaaaactttcagctggtgaaaaaattcatcaaccagattgtcgac
tccctggatattggtgaccagcaggcacgggtggcccttgtccagtactcgagcacggtc
aggacagaattccccctcaacaagttcaatacaaagcaaagcatcaaggctgccgtcaag
agaatggagtacatggagagaggaacgatgacaggcctggctctgcaacacctgtccgag
aaggtctttctcccgtccctaggagcaagggacaacatcccaaaagtcggaattgtcttc
actgatggtcgctcacaagattacattaatagttttgccgaaaagatcaaaaatcaagga
attaagatgtttgcgataggagttgggaatgcacttgaggaagaattacggataattgct
tcagatccagtgaaggatcattatcattataccgcagacttcaaaacaatgaaccaaatc
gcagacaaattacaagtcaaaatatgtgctgcacctaaagacccatgtgcctgcgagtca
ctagtggagttccaaagaaaggtcgagaaaattattaaaacactgacgtccaaactaggt
acctttgcaaaaaaactggcagctcttgagaacagacttcttgtctaa
DBGET
integrated database retrieval system
