Leucoraja erinaceus (little skate): 129709887
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Entry
129709887 CDS
T09122
Name
(RefSeq) serine/arginine-rich splicing factor 4-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03040
Spliceosome
leri05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129709887
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129709887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129709887
Spliceosome [BR:
leri03041
]
Common components
Common spliceosomal components
SR proteins
129709887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
129709887
NCBI-ProteinID:
XP_055512528
LinkDB
All DBs
Position
26:complement(28290273..28307244)
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AA seq
502 aa
AA seq
DB search
MPRVYIGRLSYQARERDVERFFKGYGKILEVDIKNGYGFVEFDDPRDADDAVYELNGKEL
CGERVIVEHARGPRRDGGYSSQRSGYGYRRSGRDRYGPPTRTEYRLIVENLSSRCSWQDL
KDYMRQAGEVTYADAHKGRKNEGVIEFKSYSDMKRALDKLDGTEVNGRRIRLVEDRPSSR
RRRSYSRSRSRSRSRSQSRNRSHSHNKSRSHSGSSKSSRSRSRSGSHSRSKSGSRSKSRS
VSKNKTKSRSRSKEKKIRASSRSGSEEKSKSRSRSAEHVKVNDAAEKTETRNENGEKERS
VSKEKSRSLSKSKDGEKTGSRSRSKEKGKSRSRSKDKSKSRSRSKSREKRKGRKRSRSES
RSRSRSRSKNEKNKRRSKRESKTKRISKSRKTKGDKEQSRSRSRSESKEKEEETRKPSVE
KETKGEGEKVDGELDINEQTKPRLASRSRSRSRSRSRSKGRSKSRSRSKSISKTEARSKS
CSPARSASRSVSRSRSRSRSKS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggtgtacatcggcaggctcagctaccaggcccgggagcgcgacgtggagcgc
ttcttcaagggctacgggaagatcctggaggtggacataaagaacgggtatggctttgtg
gagtttgatgatcctcgtgatgcagatgatgcagtttatgaacttaatggtaaagaactt
tgtggagaaagagtaatcgttgaacatgctagaggccctcgaagggatggtggttacagc
tctcaacgcagtggttatggttatagaagatctggaagagacagatatggacctccaact
cgtacagaatatagacttattgtggaaaatttatctagtcgttgcagctggcaagacttg
aaggattatatgcgtcaagcaggtgaagtaacatatgcagatgcacataaaggaagaaag
aatgaaggtgtcattgaatttaagtcttactctgatatgaaaagagctcttgacaaactg
gatgggaccgaggttaatggcaggagaatcagattggttgaagataggccatcgtcacga
cgacgacgctcttactccaggagccgtagccgctcaaggtctcgttctcaaagcagaaat
cgttcacactctcataacaagagtcgaagccacagcggaagcagtaaaagtagcagatcc
cgatcacgctctggttcgcactctcggagcaaaagcggaagcagaagcaaaagtcgaagt
gtgagcaagaacaaaaccaagagcaggagcagaagtaaagagaagaaaatcagagcaagt
agtaggagtggaagtgaggagaagagtaagagcaggagccggagtgcagaacacgttaaa
gtcaacgatgcagcagagaaaactgagaccagaaatgaaaatggggagaaggagaggagt
gttagcaaagaaaagagtagaagtctgagtaagagtaaagatggagaaaaaactggcagc
agaagtagaagcaaagagaagggtaaaagtaggagcaggagtaaagacaagagtaagagc
agaagtcgcagcaagagcagggagaagagaaagggaaggaagaggagcagaagtgagagt
agaagccggagcaggagtcggagtaaaaatgagaagaacaagagacgtagcaaacgtgaa
agcaagaccaagcgtattagtaagagcaggaaaacaaaaggtgacaaagaacaatctaga
tctaggtcgagatcagaatcaaaggaaaaggaggaagagaccagaaaaccaagtgttgaa
aaggaaactaagggcgaaggtgaaaaagtggatggggaattggacattaatgaacagaca
aagccaaggcttgcatctcgttctaggtcaaggtcaaggtccaggtccagatcaaagggc
agatctaaatctcgttccaggtctaaatcgatttccaaaaccgaagcacgttcaaagtcc
tgttcgcctgctcgctctgcgtcaagatcagtgtcacgctctagatcccggtcacgctca
aaatcttaa
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