Leucoraja erinaceus (little skate): 129709911
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Entry
129709911 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein R-like
KO
K13161
heterogeneous nuclear ribonucleoprotein R
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129709911
Spliceosome [BR:
leri03041
]
Complex C
Other components
hnRNP proteins
129709911
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
hnRNP_Q_AcD
RRM_7
RRM_5
RBD_RDR6
RRM_occluded
DUF1866
Calcipressin
Motif
Other DBs
NCBI-GeneID:
129709911
NCBI-ProteinID:
XP_055512572
LinkDB
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Position
26:complement(29350370..29370630)
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AA seq
633 aa
AA seq
DB search
MATEVNGNAAQVKEDEEPMDTSSAVTHSEHYQVLLDAGLPQKVAERLDDIFQTGLVSYAD
LDERAIDALREFNEEGAMAVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGNKVQDAT
KGPDESKIKALLERTGYTLDVTTGQRKYGGPPPDGVHAGPQPGIGTEVFVGKIPRDLYED
ELVPLFEKAGAIWDLRLMMDPLSGQNRGYAFVTFCNKDAAQEAVKLCDNCEIRPGKHIGV
CISVANNRLFVGSIPKNKTKENIMEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEFEDH
KSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLASSVTEDILEK
TFSQFGKLERVKKLKDYAFVHFEDRDSAVKAMSQMNGREVEGEDIEIVLAKPPDKKKKER
QAQRQATRTQVYEDYYYYPPPRMPPPIRGRVRGSRGGSYGYPPDYYGYEDYYDDYYGYDY
HDYRGGYEDPYYGYDDAYPVQRGRGGRGGRSAIPPPRGRGVPPPRGRAGYPQRGAPMGPP
RGARSGRGGPQPPQRGRGARGGRGNRGGNVGGKRKADGYNQPDSKRRQTNQQNWGSQPIA
QQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggctactgaggtaaatggaaatgcagcgcaggtgaaggaggatgaagaacccatggat
acctcatctgctgtcacccattcagaacactaccaggtgctactagatgctggcttgcca
cagaaagtagcagaaaggctagatgatatatttcaaacagggttggtatcttatgctgat
cttgatgaaagagccattgatgctcttagagagttcaatgaagaaggtgcaatggctgtc
ttgcaacagtttaaagaaagtgacctatcacacgtgcagaataaaagtgcctttctgtgt
ggagtaatgaaaacctacagacaacgggagaagcaaggtaacaaagtgcaggatgctaca
aagggtcctgatgagtcaaaaatcaaggcactgctagaaaggacagggtacactttggat
gtaaccacagggcaaaggaagtatggtggccctcctcctgatggcgtgcatgcagggcca
caacctggaattggaacagaggtatttgttgggaagatacccagggatttgtatgaagat
gaacttgtcccattgtttgaaaaagcgggtgccatttgggacttaagacttatgatggac
cccttgtcaggccaaaaccgtggctacgcatttgtgacattctgcaacaaagatgcagcc
caagaggctgtcaaactgtgtgataattgtgaaatccgtcctggtaaacacattggagtt
tgcatttctgtggccaacaataggctgtttgttggttctattccaaagaacaagaccaag
gaaaacataatggaagaattcagcaaagtcacagagggtctcactgatgttattctatat
catcagcctgatgataagaagaaaaacagaggcttctgttttctagaatttgaggatcac
aagtctgctgcacaggcaaggcgaagattaatgagtggaaaagtcaaggtttggggaaat
gtcgttaccgtggaatgggcagacccagtagaggaaccagatccggaggtgatggcaaag
gtcaaagttctgtttgtaagaaacctggccagctctgttacagaagacatccttgaaaag
acttttagtcagtttgggaaactggaacgtgtgaaaaaattgaaagactatgcatttgtt
cattttgaggaccgagattcagcagtaaaggcgatgagtcaaatgaatggaagagaagtt
gaaggcgaagatattgaaatagttcttgcaaagcccccagacaagaagaagaaagaacga
caagctcaaagacaggccacaaggacacaagtgtatgaagactactactactacccccca
cctcgtatgccacctcctattaggggcagagtccgtggaagtagaggaggtagttatggc
tatcccccagattattatggctatgaagattactatgatgattactatggctatgattat
catgattaccgtggtggatatgaagatccatattatggttacgatgatgcatatccagtc
cagagaggaagaggtggaaggggtggtagaagtgcaatcccacctcccagaggtcgcggt
gtacccccacccagaggaagggcaggataccctcaacgtggagcgccaatgggacctcca
agaggtgccaggagtggcagaggggggccacagccaccacaaagaggacgtggtgcccgt
ggtggtagaggcaaccgtggcggcaacgtaggaggaaagcgaaaagccgatgggtataac
cagccagattccaaacgacgccagaccaaccaacagaattggggctcgcaacccatcgct
cagcagcctcttcagcaaggtggtgattattctggtaactatggttacaataatgacaac
caggagttttatcaggatacttatgggcagcaatggaagtaa
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