Leucoraja erinacea (little skate): 129710115
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Entry
129710115 CDS
T09122
Name
(RefSeq) transformer-2 protein homolog alpha-like isoform X1
KO
K12897
transformer-2 protein
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129710115
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
leri01009
]
129710115
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129710115
Protein phosphatases and associated proteins [BR:
leri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129710115
Spliceosome [BR:
leri03041
]
Common components
Common spliceosomal components
SR proteins
129710115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
129710115
NCBI-ProteinID:
XP_055512832
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All DBs
Position
27:complement(4880963..4900322)
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AA seq
272 aa
AA seq
DB search
MKLRNRRRNRRLNLLYHSDGRSTSRSRSRSPAGLAKPKSQSASRSLSRISKLSGSRTSFS
RSRSRSRSRSRSRRHRRRSKYYSRSRSHTRSYRRKTRSRSYSPVYRRRRSSSHSPISSRR
RHVGNRTNPNPNNCIGVFGLSLYTTDRELREVFSRYGPLAGINVVYDQRTGRSRGFAFVY
FENVEDSKEAKERANGMELDGRRIRVDYSITKRPHTPTPGIYMGRPTTRVHSSHYHDSHS
DRYDDGDFTYRRRSTSPCYSRYRSRSRSYTPR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaagaaatagaagaaggaataggcggctgaatctgctctaccattcagatggg
aggtcaacatcaagatcacggagtaggagcccagctggactggctaagcctaaaagccaa
tctgcctctcgctcactgtcaagaatatcaaagttgtcaggatcccggacatcattctca
cgatctcggtcaaggtccagatcacggtcacgttcccgtcgtcatcgccgtcgctcaaag
tattactcacgatccagatctcacactcggtcatacaggaggaaaaccaggagccgatcg
tactcacctgtgtacaggcgtcgaagaagcagcagccactctcccatatccagcaggcgg
cgtcacgttggaaacaggaccaacccgaatcctaacaattgtatcggcgtgtttggcctg
agcttgtacactactgaccgggagctgcgtgaagtgttttcccgatatggaccactcgca
ggaatcaatgtggtctatgaccagcggacaggaagatcaagaggatttgcgtttgtctat
tttgaaaacgttgaagactctaaagaagcaaaggaacgtgcaaatgggatggaacttgat
ggccggcgtattagagtagattattccattacaaaacggccccacacaccaactccagga
atctacatgggccgaccaacaacccgtgttcattcctctcattaccatgactctcacagt
gatagatacgatgatggggatttcacctacagaagacgttcaacttcaccctgttacagc
agataccgatctcgatctcgttcttacacaccacgttga
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