Leucoraja erinaceus (little skate): 129710119
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Entry
129710119 CDS
T09122
Name
(RefSeq) probable beta-tubulin polyglutamylase isoform X1
KO
K16582
tubulin polyglutamylase TTLL6/13 [EC:
6.3.2.61
]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
leri03037
]
129710119
04812 Cytoskeleton proteins [BR:
leri04812
]
129710119
Enzymes [BR:
leri01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.61 tubulin-glutamate ligase
129710119
Cilium and associated proteins [BR:
leri03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
129710119
Cytoskeleton proteins [BR:
leri04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
129710119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
Microp_apicomplexa_17
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
129710119
NCBI-ProteinID:
XP_055512841
LinkDB
All DBs
Position
27:5116073..5165952
Genome browser
AA seq
1206 aa
AA seq
DB search
MELKRYQKINHFPGMNEICRKDLLARNLNRMLKLYPKDYNIFPKTWCLPSEYHDFVAYCR
SRKTKTFICKPDSECQGRGIFLTRNTSDVKPGEDMVCQVYIPKPFILDGFKFDLRLYVLI
TSCDPLRIYFYDEGLIRFATMKYSEPTEKNLEDVCMHLTNYSINKHSKNFVRDETKGSKR
KLSFFNQYMENNAYDLERLWNSIEDVIIKTILAAYPVLKHNYLTCFPNHVSGSACFEILG
FDILLDQTLKPWLLEVNHSPSFTTDSKLDQEVKDNLLYDTLCMINLAACDRRKVLEEERR
RTNERLLHIYRSREDRADEIRSNQAAWVEQMEKYEDENLGSFKRIYPNETSEKYEKFLKC
KHSLFQETVASKAREECARQMRQEIRQRQEQKEFLLKGRKCLEKNLRGESQIQKNPSPLI
LVKPKSPEELQMLIPSTPTSQVAVTVSSASQQQAGEAGREDAEIRSELSPVSAGVDSEPV
GEDQDTEPKAFATECSPEIQSQSQVEREELGQSPEQPEGPVATSAVLVVEGQDPGPKAFA
TECSPEIQSQSQVEPKELDQGPEQPEGSVEISAEAQPEADAETLPVSQPEALVQTLQSSA
EEEARRQTLSDVSAQILSESSDKVHREAADKPRPDAHDQSQAKACNQSQAEFQEQSRPEA
RGRGQSPPPQCQMQLEDLDQPLQEALDQAESESCGQTQVGARGQAHEEEACDEIHAEACD
QIQDQLQDEAQSGAKNAVNHGHTQVCDHLRQEAGDQVEPQSLHHPQSEAQNQDQAWIQTH
LKGHGQGEASAQDQPLHKAQDQVCDQVEILAKHETHGQVNPEGKEQPHHEAQTRLHGEVQ
ELDQHEGQDHEANDHFHREAQDQAHQESQGLDQQELQDPVQQESQIQKGTHTGSQAVYNK
ILDAQPVDQLDTMAQTQREIQEQQADQSQPEAQAQHEAQLDEGQLQPSNKFPMEIKVQPM
IWAQPAFISPKENVTSSDICEEIDKQSEVSEEEAKGEDSLSSTSQKSTEQVRSSGRLQPE
TQSSPRFQFLANVKPQDRSEVQPLIPGGQKVTRETLNMPLDITFTSQMIRKVSMALRCNR
NKVCPPNDINPFVRTNAAENTMEEISNSSSDQHETNCSCWRRTCMTDRIFCVGRLRDNEM
KPCLKNQPKLRRSKVTETYPIPEKVMEDKSRHNLCVVSSKAPTILRLVHPTTLKIRQKDL
NNIGRR
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggagctaaagcgttaccagaaaatcaaccactttcctgggatgaatgagatctgcagg
aaggatttgctggcccggaacttaaatagaatgttaaagctgtatccaaaagattacaac
attttccctaaaacctggtgtctaccatctgagtaccatgactttgtggcctactgtcga
agcaggaagaccaaaaccttcatatgcaaacccgactccgaatgtcagggacggggaatc
ttcttgactcggaacaccagcgatgtgaagccaggggaagacatggtctgccaggtctac
attcccaagccatttatcttggatggattcaagtttgacctcagactctatgtcttaatt
acctcctgtgacccgctgcggatttatttctacgacgaaggcttgatccgttttgctacc
atgaagtattctgaacctactgaaaagaatttagaggacgtctgcatgcatctcaccaac
tactccatcaacaagcacagcaagaactttgtccgcgatgagaccaaaggcagcaagaga
aagctctccttctttaaccagtacatggagaacaatgcctatgacctggagaggctatgg
aacagtattgaagatgtcatcatcaaaaccattctggcagcatatccagtcctgaaacac
aactacctcacctgcttcccaaatcacgtgtcgggaagtgcttgctttgagatccttggc
ttcgatatcttgctggaccagacgctaaaaccgtggctgctggaggttaaccattcaccc
agttttacgacggactccaaactggaccaagaggtgaaggataacctcctttacgataca
ctctgcatgattaaccttgccgcctgtgaccggcggaaggtcttggaggaagagagacgt
agaacgaacgagcggttgcttcacatctaccggtcgagggaggacagagccgatgagata
cgcagcaaccaagctgcctgggtggagcagatggaaaagtacgaggatgaaaacctgggg
agcttcaaaaggatttaccccaatgaaacctcggagaaatacgagaagttcttgaaatgc
aaacattcccttttccaagaaacggtggcctccaaggctcgggaagaatgcgccaggcag
atgcgtcaggagatccggcagaggcaggagcagaaggaatttcttcttaaagggcggaag
tgcctggaaaagaacctgcggggagagtcccagatccagaagaatccctctccgctgatc
ttggtgaaaccaaagtcaccagaggagctgcagatgcttattccctccactcctactagc
caagttgcagtaacagtctccagtgcaagccagcagcaagcgggggaagcggggagagag
gacgcggagattaggagcgaactgtctcccgtcagcgcaggtgtcgactcggagccggtg
ggcgaagaccaggataccgaacccaaagccttcgccaccgaatgctccccggaaatccaa
agccaatcccaggtggagcgggaggagctgggccagagtccggagcagccggaaggccca
gtggcaacctcggctgtgctagttgtcgaagggcaggatcccggacccaaagccttcgcc
accgaatgctccccggaaatccaaagccaatcccaggtggaaccgaaggagctggaccag
gggccggagcagccggaaggctcagtggaaatctcggctgaagcacaaccagaggcggat
gctgagactttaccagtgtcccagccagaggcacttgtccaaacgctccagagctcggct
gaggaagaggctcgaaggcagactttgtcagacgtcagcgcccagattttgtcagagagc
tcagacaaggttcatcgggaagctgcggacaagccccggccggacgcccatgaccagtct
caagcaaaggcctgtaatcagtcccaggcagagtttcaagagcagagccggccagaggcc
cgaggccgtggccagtcaccgccgccccaatgccagatgcaactggaggacctcgaccaa
cctcttcaggaggccctggatcaggccgagtcagagagttgtggccagactcaagtaggc
gctagaggccaggcccatgaagaagaagcctgtgatgagatccatgctgaagcctgcgat
cagattcaagaccagcttcaagatgaggcccaaagtggcgccaaaaatgccgtgaaccat
ggtcacactcaggtctgtgaccatcttcgccaggaggctggagaccaagttgagcctcaa
tccctgcaccatcctcagtcagaggcccagaaccaagaccaggcctggattcagacgcat
cttaagggccatggccagggtgaggcaagcgcccaagaccaacctctgcacaaggcccaa
gaccaggtttgcgatcaggtcgaaatcttggccaagcacgagacccacggccaagttaat
cccgagggcaaagaacaacctcaccatgaggcccaaacccgacttcatggcgaggtccaa
gaattggatcagcatgagggccaggaccatgaggccaatgaccattttcatcgtgaagcc
caagatcaggctcatcaggagtcccagggcctggatcagcaggagctccaagacccggtc
caacaggagtcccagatacagaaggggacacacacaggatcccaggcagtatacaataaa
atattagacgcacagccagtggatcagttggacaccatggcccagacccaaagggaaatt
caagaacaacaagcagaccaatcccaaccagaggcccaggctcagcatgaggcccaactg
gacgaagggcaacttcaacctagtaacaaatttccaatggagatcaaagtacagcccatg
atatgggcccagccggcatttatttcacccaaagagaatgtgaccagttcagatatctgc
gaagagattgacaagcagagcgaggtcagtgaggaggaggccaagggagaggactcctta
agcagcacgtctcagaaaagcacagagcaggttcggagctcaggccgattgcagcccgag
acccagagttcccccaggttccagttcttggccaatgtcaagccccaagaccgttccgag
gtccagcctttaattccaggtgggcagaaggtgacgagggagaccttgaacatgccgctc
gacattaccttcacctcacagatgatcaggaaggtgtccatggccctgagatgcaatcgc
aacaaggtgtgcccgccaaatgatatcaatccctttgtgcggactaacgccgcagagaac
acgatggaggagatctcaaactcgagctcggatcaacacgagacaaactgcagctgctgg
agaagaacttgcatgacagacagaatcttctgcgtgggtcgattgcgggacaatgagatg
aaaccctgtctcaagaaccagcccaagctgcggagaagcaaagtcaccgaaacgtatcca
atccccgagaaggtgatggaggacaagagccgacacaacctgtgcgtggtgtcatccaaa
gcccccaccatcctacgccttgtccatccgacaacactcaagattagacaaaaggacctc
aacaacattggcaggcgataa
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