Leucoraja erinaceus (little skate): 129710216
Help
Entry
129710216 CDS
T09122
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03266
Virion - Herpesvirus
leri04081
Hormone signaling
leri04145
Phagosome
leri04148
Efferocytosis
leri04510
Focal adhesion
leri04512
ECM-receptor interaction
leri04810
Regulation of actin cytoskeleton
leri04820
Cytoskeleton in muscle cells
leri05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
129710216
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
129710216
04512 ECM-receptor interaction
129710216
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129710216
04148 Efferocytosis
129710216
09144 Cellular community - eukaryotes
04510 Focal adhesion
129710216
09142 Cell motility
04820 Cytoskeleton in muscle cells
129710216
04810 Regulation of actin cytoskeleton
129710216
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129710216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129710216
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
leri04147
]
129710216
04515 Cell adhesion molecules [BR:
leri04515
]
129710216
04090 CD molecules [BR:
leri04090
]
129710216
Membrane trafficking [BR:
leri04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
129710216
Exosome [BR:
leri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129710216
Cell adhesion molecules [BR:
leri04515
]
Integrins
Integrin beta subunits
129710216
CD molecules [BR:
leri04090
]
Proteins
129710216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
129710216
NCBI-ProteinID:
XP_055513012
LinkDB
All DBs
Position
27:11986106..12034434
Genome browser
AA seq
787 aa
AA seq
DB search
MGAHGLLLRLVAVVALFCISTVRGSNMCKGALTCATCLEIDPYCAWCSQEDFGKGSASRC
DLKENLITKGCRENATEFPQGSLKILQDLPLSEKGSSDQPDKTVQFSPQKISINLRRGES
MSFTVHARQVEDYPVDIYYLMDVSYSMKDDLKTIQQLGTKVATEMAKQTSNLQLGFGAYV
DKPVSPYIYMTTAEEIKNPCISIGSTCSPVFGFKNVLKLTEEVNRFNEEVIKQQVSRNRD
TPEGGMDAVLQVSVCTEEIGWRQEATHMLVFVTDATSHLALDGRLAGIIHPNDGHCHMGL
DNEYNASAFLDYPSLALLTEKLTENNIYLIFAVTQPVTEIYTNYSRMIPGTTVGTISKDS
SNVLELIVDAYEQIRSQVELELLNLPKELSVSFDAYCGNDKFIPGQKFCTGLKVGDTVNF
TVTLEARECPKGEQVKTFTLKPILFKDSLEITVNFSCSCGCESEAVENSMLCTNGNGTYE
CGVCKCLPGRFGPSCECKEGDSLLTTQETCSPKKGDPICSNRGECICGQCVCHSIGHGLI
SGQFCECDDFSCGRHNGKMCSGNGQCQCGECRCLPDWTDSFCNCSTKTGSCRPPVGSMCH
GRGDCQCGKCVCEGGAYGDLCEKCPTCPDACTFKKQCVECKVFDTGELKDEGKCEKVCRD
EIRYVETVDMKTKDGVVCSYKDQNGCIVHFGYHEETNGKSILSVIKEPECQPGVNPLYIV
LPLMGIILLLGLVALLIWKLLITVHDRKEFAKFEAERAKAKSVNVNNPLYQGPISTFTNL
TYSGKAD
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgcacggcttgctgttgaggctggtcgctgtggtagcactgttctgcatctcc
acagtccgtggcagcaatatgtgcaaaggagcactgacatgtgcaacgtgcctggagata
gatccgtactgtgcctggtgttcacaagaggatttcggaaagggcagtgcttcgcgatgt
gatctaaaggagaatttaattacaaagggttgcagagaaaatgcgactgaatttccacag
ggctccctcaaaattcttcaggatctgcctctgagtgagaaaggatcaagtgaccaaccg
gacaaaaccgtgcaattctctcctcaaaagatcagcatcaacctgcgccgaggtgaatcc
atgtcattcacggtgcacgcacgccaggtcgaggactatcctgtcgacatctactacttg
atggacgtctcctactccatgaaagatgatttgaaaactatccagcagcttggcacaaag
gtggccacagaaatggccaagcagaccagcaacctgcaactgggctttggagcttatgtg
gataaaccagtctcgccgtacatctatatgacaacagcagaggaaatcaaaaacccttgt
atcagtattggcagtacatgctcgcctgtgttcggatttaaaaatgtcctgaaactcacg
gaggaggtgaacaggtttaatgaggaagttatcaaacagcaggtctcgagaaaccgagac
acacctgagggcgggatggatgctgtcctccaggtctcggtgtgcacggaggagatcggt
tggcgacaagaagccacccacatgctggtctttgtcactgatgccacatcgcacttggca
ctggatggcaggctggctggcataatccaccccaatgacgggcattgtcacatggggcta
gacaacgagtacaacgcctccgcttttctggattacccatcacttgctctgctgacagaa
aagctcacagaaaataacatctacctcatctttgccgtcacccaaccagtcacggaaata
tatacgaattacagcaggatgattcctggtaccactgtcgggacaatttccaaggattca
agcaatgtcttggagctcattgtggatgcctatgagcaaatccgttcccaggtggaattg
gaacttttgaatctgcctaaagagctatcagtgtccttcgatgcttactgtgggaatgac
aaatttattccaggacagaaattctgcacaggacttaaggttggagacacagtgaatttt
acagtgacactggaggccagggagtgtccaaagggtgagcaggtgaagacatttacgctg
aagccgattttgttcaaggatagtctggagatcacggttaatttcagttgtagctgcggg
tgtgagagtgaagcggtggagaacagcatgctgtgcaccaacggcaatgggacgtacgag
tgcggagtgtgcaagtgcctccctggccgctttgggccgtcctgcgagtgcaaggaaggg
gatagcttattgactacacaggaaacctgctcgcccaagaaaggtgaccccatttgcagc
aaccgcggagagtgcatttgtggacagtgcgtctgccacagcattggccatggcctcata
tccggacagttctgcgagtgcgatgacttttcctgtggacgtcacaacgggaaaatgtgc
tcgggcaatggccagtgtcagtgtggagagtgcaggtgcctgccggactggacggacagt
ttctgcaactgtagcacgaagaccgggagctgtcggccccccgtgggttctatgtgtcat
ggccggggcgattgtcagtgcgggaagtgcgtttgtgaaggaggggcgtacggtgacctg
tgtgagaaatgccccacctgtcccgatgcctgcaccttcaagaaacaatgcgtggagtgc
aaggtgtttgacacgggcgagctgaaggacgagggcaagtgtgagaaggtgtgcagggat
gagatccggtatgtggagaccgtggacatgaaaaccaaggatggtgtcgtctgcagctac
aaagaccagaacggctgcatcgttcactttggttatcatgaagaaacaaatggaaaatcc
attctgtcagtcattaaagaaccagagtgccagcccggagtgaacccgctgtacattgtc
ctgcctctgatgggcatcatcctcttgctgggcctggtggccttgctgatttggaagctg
ctgatcaccgtccatgaccggaaggagtttgcaaagtttgaggcagaacgagccaaggcg
aaatctgtcaatgtgaacaacccactgtaccaagggccaatatcaaccttcaccaacctc
acgtacagcggcaaggcggactga
DBGET
integrated database retrieval system