KEGG   Leucoraja erinaceus (little skate): 129710216
Entry
129710216         CDS       T09122                                 
Name
(RefSeq) integrin beta-3-like
  KO
K06493  integrin beta 3
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri03266  Virion - Herpesvirus
leri04081  Hormone signaling
leri04145  Phagosome
leri04148  Efferocytosis
leri04510  Focal adhesion
leri04512  ECM-receptor interaction
leri04810  Regulation of actin cytoskeleton
leri04820  Cytoskeleton in muscle cells
leri05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:leri00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    129710216
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    129710216
   04512 ECM-receptor interaction
    129710216
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    129710216
   04148 Efferocytosis
    129710216
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129710216
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129710216
   04810 Regulation of actin cytoskeleton
    129710216
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    129710216
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:leri04131]
    129710216
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:leri04147]
    129710216
   04515 Cell adhesion molecules [BR:leri04515]
    129710216
   04090 CD molecules [BR:leri04090]
    129710216
Membrane trafficking [BR:leri04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    129710216
Exosome [BR:leri04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129710216
Cell adhesion molecules [BR:leri04515]
 Integrins
  Integrin beta subunits
   129710216
CD molecules [BR:leri04090]
 Proteins
  129710216
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin PSI_integrin I-EGF_1 EGF_2 vWA_SIBA-E
Other DBs
NCBI-GeneID: 129710216
NCBI-ProteinID: XP_055513012
LinkDB
Position
27:11986106..12034434
AA seq 787 aa
MGAHGLLLRLVAVVALFCISTVRGSNMCKGALTCATCLEIDPYCAWCSQEDFGKGSASRC
DLKENLITKGCRENATEFPQGSLKILQDLPLSEKGSSDQPDKTVQFSPQKISINLRRGES
MSFTVHARQVEDYPVDIYYLMDVSYSMKDDLKTIQQLGTKVATEMAKQTSNLQLGFGAYV
DKPVSPYIYMTTAEEIKNPCISIGSTCSPVFGFKNVLKLTEEVNRFNEEVIKQQVSRNRD
TPEGGMDAVLQVSVCTEEIGWRQEATHMLVFVTDATSHLALDGRLAGIIHPNDGHCHMGL
DNEYNASAFLDYPSLALLTEKLTENNIYLIFAVTQPVTEIYTNYSRMIPGTTVGTISKDS
SNVLELIVDAYEQIRSQVELELLNLPKELSVSFDAYCGNDKFIPGQKFCTGLKVGDTVNF
TVTLEARECPKGEQVKTFTLKPILFKDSLEITVNFSCSCGCESEAVENSMLCTNGNGTYE
CGVCKCLPGRFGPSCECKEGDSLLTTQETCSPKKGDPICSNRGECICGQCVCHSIGHGLI
SGQFCECDDFSCGRHNGKMCSGNGQCQCGECRCLPDWTDSFCNCSTKTGSCRPPVGSMCH
GRGDCQCGKCVCEGGAYGDLCEKCPTCPDACTFKKQCVECKVFDTGELKDEGKCEKVCRD
EIRYVETVDMKTKDGVVCSYKDQNGCIVHFGYHEETNGKSILSVIKEPECQPGVNPLYIV
LPLMGIILLLGLVALLIWKLLITVHDRKEFAKFEAERAKAKSVNVNNPLYQGPISTFTNL
TYSGKAD
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgggagcgcacggcttgctgttgaggctggtcgctgtggtagcactgttctgcatctcc
acagtccgtggcagcaatatgtgcaaaggagcactgacatgtgcaacgtgcctggagata
gatccgtactgtgcctggtgttcacaagaggatttcggaaagggcagtgcttcgcgatgt
gatctaaaggagaatttaattacaaagggttgcagagaaaatgcgactgaatttccacag
ggctccctcaaaattcttcaggatctgcctctgagtgagaaaggatcaagtgaccaaccg
gacaaaaccgtgcaattctctcctcaaaagatcagcatcaacctgcgccgaggtgaatcc
atgtcattcacggtgcacgcacgccaggtcgaggactatcctgtcgacatctactacttg
atggacgtctcctactccatgaaagatgatttgaaaactatccagcagcttggcacaaag
gtggccacagaaatggccaagcagaccagcaacctgcaactgggctttggagcttatgtg
gataaaccagtctcgccgtacatctatatgacaacagcagaggaaatcaaaaacccttgt
atcagtattggcagtacatgctcgcctgtgttcggatttaaaaatgtcctgaaactcacg
gaggaggtgaacaggtttaatgaggaagttatcaaacagcaggtctcgagaaaccgagac
acacctgagggcgggatggatgctgtcctccaggtctcggtgtgcacggaggagatcggt
tggcgacaagaagccacccacatgctggtctttgtcactgatgccacatcgcacttggca
ctggatggcaggctggctggcataatccaccccaatgacgggcattgtcacatggggcta
gacaacgagtacaacgcctccgcttttctggattacccatcacttgctctgctgacagaa
aagctcacagaaaataacatctacctcatctttgccgtcacccaaccagtcacggaaata
tatacgaattacagcaggatgattcctggtaccactgtcgggacaatttccaaggattca
agcaatgtcttggagctcattgtggatgcctatgagcaaatccgttcccaggtggaattg
gaacttttgaatctgcctaaagagctatcagtgtccttcgatgcttactgtgggaatgac
aaatttattccaggacagaaattctgcacaggacttaaggttggagacacagtgaatttt
acagtgacactggaggccagggagtgtccaaagggtgagcaggtgaagacatttacgctg
aagccgattttgttcaaggatagtctggagatcacggttaatttcagttgtagctgcggg
tgtgagagtgaagcggtggagaacagcatgctgtgcaccaacggcaatgggacgtacgag
tgcggagtgtgcaagtgcctccctggccgctttgggccgtcctgcgagtgcaaggaaggg
gatagcttattgactacacaggaaacctgctcgcccaagaaaggtgaccccatttgcagc
aaccgcggagagtgcatttgtggacagtgcgtctgccacagcattggccatggcctcata
tccggacagttctgcgagtgcgatgacttttcctgtggacgtcacaacgggaaaatgtgc
tcgggcaatggccagtgtcagtgtggagagtgcaggtgcctgccggactggacggacagt
ttctgcaactgtagcacgaagaccgggagctgtcggccccccgtgggttctatgtgtcat
ggccggggcgattgtcagtgcgggaagtgcgtttgtgaaggaggggcgtacggtgacctg
tgtgagaaatgccccacctgtcccgatgcctgcaccttcaagaaacaatgcgtggagtgc
aaggtgtttgacacgggcgagctgaaggacgagggcaagtgtgagaaggtgtgcagggat
gagatccggtatgtggagaccgtggacatgaaaaccaaggatggtgtcgtctgcagctac
aaagaccagaacggctgcatcgttcactttggttatcatgaagaaacaaatggaaaatcc
attctgtcagtcattaaagaaccagagtgccagcccggagtgaacccgctgtacattgtc
ctgcctctgatgggcatcatcctcttgctgggcctggtggccttgctgatttggaagctg
ctgatcaccgtccatgaccggaaggagtttgcaaagtttgaggcagaacgagccaaggcg
aaatctgtcaatgtgaacaacccactgtaccaagggccaatatcaaccttcaccaacctc
acgtacagcggcaaggcggactga

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