Leucoraja erinaceus (little skate): 129710289
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Entry
129710289 CDS
T09122
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog
Organism
leri
Leucoraja erinaceus (little skate)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-C3HC4
zf-C3HC4_4
BRCT_2
zf-C3HC4_2
zf-RING_UBOX
RING_XB3-XBAT31
PTCB-BRCT
zf-RING_2
zf-Nse
zf-C3HC4_3
zf-RING_6
zf-RING_5
DUF3958
zf-RING_10
zf-ANAPC11
RTT107_BRCT_5
zf-rbx1
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
129710289
NCBI-ProteinID:
XP_055513155
LinkDB
All DBs
Position
27:complement(16411379..16483380)
Genome browser
AA seq
1950 aa
AA seq
DB search
MALCKSEIEHVHKVLSLMLNNLECPICLELMKEPVSTKCDHQFCRFCILKLFGKTKGSIL
CPLCKNKLTKRSLQESTRFKQLAEGIVKTIRAFELDTGYEFSIDDSQKTRPAEINSYKQL
WKDDSSAQSNNTPQTILAAGVSKSRTLNDCTGRPLTDVVRRVSTRNKKQKIDAEPVYVEI
DSDSSEESLFRVHIKERLTLQQNTVNKKATLEEEKSDQCDNDEKYIEENKSEVSKPVLEE
LSSEMDDNEVSEETANTDAGDYSCATESEAGIKQMTGNKSESSFCSPEAPRELLGSPVDK
VNEKIVKHAIKMVNPESRSDGKELFTDSLVPLSSENNVLKKDLEMLDNQNQKDSNWIGGD
KIDFHLNGNDSNNSSVLKVSKRKSQRILKKVSEWLSKINVDEVARLGVDSNPCDQNTDSD
SLAEKESCLASCEEASSSAETEKVEYDHLASPLKKDKEVTKALAIDIKNKVFGKTYKRDK
RKSAPINWNFRSAGKSDDLLSDKEPVHEISSNKTQKGKTRSNGLHPEDFIKTSINDEGYP
VGVWNSNTKIDQEHVLVPQDTEIEAHEEMIEKSSDSIQEGKPIAPIPKEAVCDETVETEY
LEEVCKQNQQQPDLELGKTDAEDKKNTNKVLGKKGKKLSTKQAKKRTKPLQLVNQLARAS
PRSSHTDMNENKIDSFPSSAGTVKTEPEVRTTRRSSRLKLLDEKIVMEGKKTPEPTRLHS
PLGTGVDIAPSVQNVENIDTGMVCAETESLTMEDIIAQDCNEQLSNANCSNENLTSCGKC
VVEELEDGAAHGLSGDKERQSRDCNKTEETGNAALLAEHPLSRDHSPFPIASQDSGSETS
VLLLAAQLVPEREHGAQNVRSSCAEVGKLSSNDTTFISENNSRIAAMSNEENSGEEMTAK
LTGAKEITGDSEVDTEQLLKSFKRAKRKSFILLPTTSCQSVGDGCRGSPTSQTQSGKSKD
TIKRAVINRKDDRNFISRRKTGKLNLDKTTGIKETRVSNEVKAKQCSSELNNGLQQLNRA
DRDSVEIVPPTASLPLPPVLPEHGQQMVPLSNRTKGKRKNRQLRKKGSKCSTLVTTEKEE
FDSDRSSQTGELLNRNTNNNSRLKAANLVKDTVVNQEVQQNVLDLELESNVHSAIECFSA
GEIEEVVEIEKDIYHERESDKLLKTREFYENSELHEVPDNVEGTTDCKLVKLADSPFMHS
DANKSNIAGNKVGENLQMTFATSDELFDSAKPSFQKNIAVNELDKLQSECDVRDDQVQFK
LYDEIAELNSSLQNSSQGRARGCKKRPVKLSTSESETSDDDLPCFQLFGFNKLSSKTQSV
SQSPLSTTCLSLKTSQVQNTSLPNHNTEIRKTVFTEVNKLDESKGKDCPQNISLSPSQES
EESPDLFSSSDGSSPNPSPQPKVSHKTLRKQKKALNLSALEIQEEKIEETRKGSSASYLQ
PQRLEGRTVPHYDSDASHTGDSFSPECEFLTTQQKHAMQNNIKKLEREMAVLEAVLDQHG
SHDAEHLLSLNHQEDCPKSLQHQEKTNRSLIEKVTAAFPLGDAEILQTKSKCLPATEGLG
PQPQLNTSITFTHVNKEETECPKPLMDLEIGQIPENFQDANSLLHQFQSEAVSKSRQEEM
KEPSSAKRIKGKKEQANLENEGNAMLLQDITLIPKLGSQGKKECDLVPAERTSIQSPRMA
LQHKQGTTGSLSLPQSQEEKANSQPISESFKQNSPSRASSPVFNKISNTTSNLSIFHRKM
SFVASGLNRRESQLIEAFTKKMGAEFLSNFSPSTTHVIMKTDADFVCERTLKYFMGIAGR
RWVVSYQWIIECFREGSIVDELEFEVRGDVINGRNHNGPRKARKTADAELLLSQYEICCY
GSFTGMSRDQLEWMIELCGASIVKEPCLFTYSPNCTEVVVVQPDANPINTDYRAIQRQYN
SIVVSREWILDSIACYENHQLKAYLICLPD
NT seq
5853 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtgcaagtcagaaattgaacacgtgcacaaggttttgtcgttaatgttgaat
aatttggaatgtcctatctgcttggaattgatgaaagaacctgtgtcaaccaaatgtgat
catcagttctgtaggttttgtatattgaagctgtttggcaagacaaaaggcagtatactg
tgcccattgtgcaagaacaaacttaccaagaggagtctccaggaaagcactcgatttaaa
caacttgcagagggaattgtgaaaacaattcgtgcgtttgaattggacacgggttatgaa
ttctccattgatgactctcagaaaacaagaccggctgagatcaactcttacaaacagtta
tggaaagatgacagcagtgcccagagcaacaacaccccacagacaatattagctgctgga
gtctctaaaagtcgcactttgaatgattgcactggacgtcctttgacagatgttgtcaga
agagtttctacaagaaataaaaagcagaaaatagatgctgaacctgtttatgttgagatt
gattcagattcttctgaggaatctttgtttagagtacatattaaggaaaggttaacactg
cagcaaaatactgtgaataagaaagccactcttgaagaagagaaatcagatcaatgtgac
aatgatgaaaagtatatcgaggaaaataaatcagaagtatctaaaccagtgttggaggaa
ctttcatcagaaatggatgataatgaagtgtcagaagagactgcaaacactgatgctggt
gattattcctgtgcgactgaatctgaggcaggaataaaacaaatgacgggcaacaaatct
gagagtagcttctgcagcccagaggcgccgagagagctgcttgggtctccggttgacaaa
gtcaatgaaaaaattgtgaagcatgctataaaaatggtgaacccagaaagtcgcagcgat
ggaaaggagctcttcactgacagtctggtgccattgtcttctgagaacaatgtgttgaaa
aaggacttggaaatgttagataaccagaaccaaaaagattctaattggataggtggagat
aaaattgattttcatttaaatgggaatgactctaataattcatcagttctaaaagtatcc
aagcgaaaaagccagagaattctgaagaaagtcagtgaatggttatccaaaattaatgtt
gatgaggtggcaaggcttggtgttgactctaatccatgtgaccagaacactgattcagat
tctttagcagaaaaagagagctgccttgcctcttgtgaggaagcttccagttcagctgag
actgaaaaagtggagtatgaccatcttgcatcacctttaaaaaaggacaaagaagtaaca
aaagcattggcaattgatattaaaaacaaagtatttgggaaaacctataagagagacaaa
agaaaaagtgcccccataaactggaattttagatctgcaggcaaaagtgatgatttactg
tccgataaggaacctgtccatgagattagttctaataaaacgcaaaagggaaaaacgaga
agcaatgggctacatcctgaagactttataaagacgtcaattaatgatgaaggttatcct
gttggcgtttggaattcaaacaccaaaattgatcaggaacatgttcttgtacctcaggac
actgaaattgaggcacatgaagagatgatagaaaaatcatcagatagtatacaggagggc
aagcccattgcccccattccaaaggaagctgtttgtgatgagacggtggaaactgaatat
ttggaggaagtctgcaagcaaaaccagcaacagcctgatttggaattgggcaagactgat
gctgaagacaagaaaaacaccaacaaagttttgggtaaaaaagggaaaaagctgtcgaca
aaacaggccaaaaaaagaacaaaacctttgcagttagtcaaccagcttgcaagagcaagt
cccagaagcagccatacagatatgaatgaaaacaagattgacagttttcccagtagtgca
ggaactgtgaaaacagaaccagaagtaaggactaccagacgaagcagcaggctgaagctt
ctggatgaaaagatagtcatggaaggcaaaaagacacctgaaccgaccaggttgcattca
ccgcttgggactggagtagatattgcaccttcagttcagaatgtggaaaacattgatact
ggcatggtgtgtgcagaaactgaaagcttaactatggaggatattatagctcaagactgc
aatgagcagttatccaatgctaattgttcaaatgaaaacttgacatcttgtggaaaatgt
gtggtggaggaacttgaagatggggctgcacatggattatcaggtgacaaggagaggcaa
tcaagagactgcaataagacagaggagactggtaatgctgcactgctagccgaacatcca
ctgtcccgtgatcattcccctttcccaatagcttcacaagattccggctcggagaccagt
gtgttgttactagcagcacagctagttcccgagagagaacatggtgctcagaatgtccgt
tccagttgtgcagaagtgggaaagttgagctcaaatgatacaacgtttatatctgaaaat
aattcaaggatagcagctatgagcaatgaagaaaacagtggtgaggaaatgacagcaaag
ctgactggagcaaaggaaattactggagacagtgaagtggacactgagcagcttctaaaa
tcattcaagcgagcaaaacggaaatcgttcattcttttgccaaccacaagctgccaatct
gtaggtgatgggtgccgaggatctccaacttcccagacacagtccggaaagtctaaggac
acaattaaaagagctgtaataaataggaaggatgacagaaactttatttcacgtcgaaaa
actggaaaactgaatttggataaaacaactgggatcaaagaaactcgggtgtccaatgag
gttaaagctaagcagtgctcttctgaattaaataatggtctgcagcagctgaacagggcc
gatcgagattctgttgaaattgttcctccaacagcatctttgcctcttcctcctgtactt
ccagagcatggccagcagatggtgcctctgtcaaataggacaaaggggaagcgaaagaac
aggcagcttagaaaaaaaggatcaaaatgtagtactttggttactacggagaaagaagaa
tttgattctgatagatcaagccaaactggtgagctcctaaatagaaacacaaacaacaat
tctcggcttaaagctgcaaatctagttaaagatactgttgttaaccaagaggttcagcag
aatgttttagatctagaacttgaatccaatgtccattcagcgattgaatgtttttcagct
ggcgagattgaagaggttgtagaaattgaaaaagatatttaccatgaaagagaatcagat
aaattactaaaaacaagagaattttatgaaaatagtgaattacatgaagtgcctgataat
gtagaaggtactactgactgcaaattggttaaattagctgattctccatttatgcactct
gatgcaaacaaaagcaacattgcaggaaataaagttggtgagaatttgcaaatgactttt
gcaacgtctgatgagctttttgattctgcaaagccaagtttccagaaaaatattgcagtg
aatgaactggataaattgcaaagtgagtgtgacgtgagagacgatcaggtacaattcaaa
ctatatgacgaaattgcagaactcaacagcagcttacaaaactcttcccaaggtcgggcg
agaggctgcaagaaacgaccagtaaaattatcaacttcagaatctgaaacaagtgatgat
gacttgccttgttttcagctatttggattcaacaagttgagttcaaaaactcagtcagtg
tcgcaaagtcccttaagtacaacttgtctgtctttgaaaacctcccaagtgcaaaacact
tcattgccaaatcataacacagaaattagaaagacagttttcactgaagtaaataaattg
gatgagagcaaaggtaaagattgtccacaaaatatatccctttccccaagccaagaatcg
gaagaatctccagacctgttttcttcttctgatggttcgtctcccaatcctagtccacag
ccaaaagtgagccacaagacacttcgcaaacaaaaaaaggctttaaatttgtctgcactt
gaaattcaggaggaaaagatcgaagaaactcggaaaggttcgtctgcttcctatctgcag
ccacaacgtttagaaggaagaacagtgccacattacgacagtgatgccagccacacgggc
gattccttctctccagagtgcgagtttctcacgacgcagcaaaagcatgcaatgcagaat
aacataaagaaacttgagcgtgaaatggctgtccttgaggcagtattggatcaacatgga
agccacgatgctgaacacttactctcattgaaccatcaagaagactgtccaaagagcctt
caacaccaagagaaaacaaacagatcattgatagaaaaggttactgctgcctttcccctg
ggggatgctgagattttgcaaaccaaatcaaaatgtcttccagcaactgagggcttagga
cctcaaccacagctaaacacaagcataacctttacacatgtgaacaaagaggagactgaa
tgtccaaaacctttaatggatttggaaattggacaaataccagaaaactttcaagatgcg
aatagcttgcttcatcaattccaatctgaagcagtttctaaatcaaggcaagaggaaatg
aaagagccttcaagtgcaaaaagaataaaaggaaagaaagaacaagccaacttagagaat
gaaggtaatgcaatgttattgcaagacattacactgattccgaaattgggcagtcaagga
aagaaggagtgtgacctggtaccagctgaaaggacttccattcagtctcccaggatggca
ttgcaacataaacaaggaacaactggcagtctgagtcttccgcaatcccaagaagagaaa
gccaacagtcagccaatatccgaaagcttcaagcagaattctccttctcgtgcttcttct
cctgttttcaacaaaatttcaaacaccacgagcaacctttcgatatttcacagaaaaatg
tcctttgtggcctcagggttgaacagacgtgaaagtcaattgattgaagcttttacaaaa
aaaatgggggctgaatttctaagtaacttttcacccagtacaacccatgtcatcatgaaa
acagatgcggattttgtttgtgaaaggacattgaagtacttcatgggaatagcagggagg
cgatgggttgtcagttatcagtggatcattgagtgttttagagagggctcaatagttgat
gagctcgagtttgaggtgcgaggagatgtaatcaatggaagaaaccacaacggcccaaga
aaagcaagaaaaacagctgatgcagaactgctgttaagccagtatgagatttgctgctat
ggttcattcactgggatgagcagagatcagttggaatggatgatagaactctgtggtgcc
tcaatagttaaggaaccttgtttattcacctatagtcctaattgcaccgaagtggtggta
gtgcagcctgatgctaatccgattaacaccgactatagagcaatacaaagacagtacaat
agtattgtggtttcccgtgaatggattttggacagtattgcctgctatgaaaatcatcaa
ttaaaagcttatctgatctgccttccagactga
DBGET
integrated database retrieval system
