Leucoraja erinacea (little skate): 129710336
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Entry
129710336 CDS
T09122
Symbol
sgca
Name
(RefSeq) epsilon-sarcoglycan isoform X1
KO
K12565
alpha-sarcoglycan
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129710336 (sgca)
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Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
He_PIG
Motif
Other DBs
NCBI-GeneID:
129710336
NCBI-ProteinID:
XP_055513242
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Position
27:complement(20455091..20501158)
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AA seq
411 aa
AA seq
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MARVTVWIYASAVFLTTIFADQNVSPMAGVFFIHVLERDYFQAGFRSFQEASGIITSIPI
TFNTNLHDHPDRPRWLRFIQRTEYHDGILYGTPTMKDVGEKIIEVTAVNRKTFETSRQNV
IINVGEPGGLKLPYHVEFYVENRNVEEVLPLEMQQYFQDRAASIWGSNRLTMINITSALD
RGGRVPLPIEGRKEGVYVKVGSNMPFPSCLEEEVLGGEQCSDQFEPSNCEDTFSPQFIID
WCNILLIDKSKPDSPEVEVVPGDGILTDSGEYDPPPDFLEARDYYLDYVVTITVPLVIGL
FLCLILAYIMCCRREGVEKRDAKTSDIQLVHHQSIQDDTNELRNLAKSRDGLRPLSTLPM
FNARTGERVPPRIPFNSDTSRIPLIMDQQEQHSDPYPRIQPKAQQQKVIGK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagtcacagtttggatttatgcttcagcagtgttcctgaccacgatattcgct
gatcagaatgtgagtcccatggcaggagtcttttttatacatgtactagagagggactac
tttcaagcagggtttcgttcattccaagaagcaagtggtatcatcaccagtatccccatc
actttcaacaccaacctccatgaccaccctgaccgccctcgctggcttcgttttatacag
cggactgaataccatgatggaattctttatggaacgccaaccatgaaagatgtcggagag
aaaataattgaagttactgctgttaataggaagacatttgagacatcaaggcaaaacgtc
atcattaatgttggagaaccaggagggttgaaattgccataccatgttgagttctacgtg
gaaaacagaaatgtggaggaagtattgcccttggaaatgcaacaatatttccaggacaga
gcggcgagcatatggggatcaaaccgtttgaccatgatcaacatcacttcagcgctggac
agaggaggccgggttccattgcccattgaaggaaggaaagagggtgtgtatgtaaaggtt
ggttccaacatgcccttcccttcttgcctggaggaggaagtacttggaggagaacaatgc
agtgaccaattcgaacccagcaactgtgaagacacatttagtcctcagttcattattgat
tggtgcaatatcttattgatcgataaatccaaaccagattccccagaggtcgaggtggtt
cctggggacggcatccttacagatagtggagaatacgatcctcccccggatttccttgaa
gccagagactactatttggactatgtggtcacaataacagtccctttagtaattggtcta
tttctgtgcctcatccttgcttacataatgtgctgccgtcgagagggagtggaaaaacga
gatgcaaagacttcagatattcaacttgtccatcaccagtcgattcaggatgataccaat
gaactcaggaacttggctaaaagcagggatggcttgcgacctctatccactctccccatg
tttaatgccaggactggggaaagggtccccccacgaatcccttttaattctgacacatcc
cgaattcctcttatcatggaccagcaggaacaacacagtgatccttatcccagaatccag
ccaaaggctcaacagcaaaaagttattggcaaatga
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