Leucoraja erinaceus (little skate): 129710372
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Entry
129710372 CDS
T09122
Name
(RefSeq) tumor necrosis factor receptor superfamily member 16-like
KO
K02583
tumor necrosis factor receptor superfamily member 16
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
leri04010
MAPK signaling pathway
leri04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
129710372
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129710372
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
129710372
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
leri04050
]
129710372
04090 CD molecules [BR:
leri04090
]
129710372
Cytokine receptors [BR:
leri04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
129710372
CD molecules [BR:
leri04090
]
Proteins
129710372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_16_TM
TNFR_c6
Death
TFIIA
Piezo_TM1-24
VPS13_N
DUF5850
SLC52_ribofla_tr
BSP_II
DUF6550
V_ATPase_I
WWE_2
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
129710372
NCBI-ProteinID:
XP_055513304
LinkDB
All DBs
Position
27:complement(26202759..26310875)
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AA seq
407 aa
AA seq
DB search
MKLAPVILLFTAVSVYKADENCESGEFTTSGECCSVCPPGEGVVSTCGEKDTECETCMDS
LFYSDVSSHTEPCYPCTVCPESKNIGIPCMENFDTTCICMNGYYEISDGKCLLCKMCDKG
FGVVQQCSYGRDTLCEECPANTYSDQKSNIDPCLPCTVCEDYEEMISDCTPTQDAECISL
RRPRPSVASTVIPPKIVTSTEIMTTTAVPSSPQFIGQGNTDNIIPVYCSILAAVVVGLVA
YVAFKRWNSCKQNKQGANNRAVNETQSPEGEKLHSDSGISVDTQSLHEQQQKQQQQQQQQ
QQQQSQVTVEEPSLYNALPPHKQEEVEQLLNTCEEETDWCNLAGLLGYSEEHIDTFKQDD
HPVRALLSDWSAKDCATTDALCTALRKLKRDDIIESLSSEPTAMSAV
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgctccggttattttgctgtttacagcggtatctgtgtacaaggctgatgaa
aactgcgaaagtggggaatttaccaccagtggggaatgctgttctgtatgtccaccggga
gaaggtgtggtgtcaacatgtggcgaaaaagacactgaatgtgagacgtgcatggacagt
ttattttactcagacgtgtcaagccatacggagccctgttacccatgcacggtgtgtcca
gaatcaaaaaatatcggaatcccttgcatggagaactttgacaccacctgtatttgcatg
aatgggtattacgaaatctcagacggaaagtgccttctgtgcaagatgtgtgataaggga
tttggagtggtgcaacagtgttcgtatggaagggatacactgtgtgaagaatgccctgca
aacacttactctgaccagaagagcaacatcgacccttgtctcccgtgcacagtctgtgaa
gattatgaagaaatgatctcagattgcacacctacgcaagacgctgaatgtatctcactt
cgtcgcccaagaccttctgtagctagcacagtgatacctccgaaaatcgtcacgagcaca
gagataatgactaccacggcagtcccaagctcaccacagtttattgggcagggcaacacc
gacaacatcatccctgtctactgttcaatcttggccgcagttgtggttggacttgtggcg
tacgtggcttttaaacgatggaacagctgtaagcaaaacaagcagggtgccaataacaga
gcagtaaacgagacacaatcaccagagggggagaagctgcacagtgacagcgggatctca
gtcgacacccagagcctacacgagcagcagcagaaacagcagcagcagcaacagcagcag
cagcaacagcagagccaagtcacagtggaggaaccaagcctgtacaatgccctccctccc
cacaagcaggaagaggtggagcagctgctgaacacttgtgaagaagagacagactggtgc
aacctggccgggttgctgggctacagcgaggaacacatagacactttcaagcaggacgat
cacccggtgcgtgccctcctctccgactggtcggccaaggactgcgccactacggacgca
ctttgcactgccctgcgcaagctgaaacgagacgacatcatcgagagcctcagcagcgag
cccacggccatgtcggctgtgtga
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