KEGG   Leucoraja erinaceus (little skate): 129710388
Entry
129710388         CDS       T09122                                 
Name
(RefSeq) integrin alpha-8-like isoform X1
  KO
K06584  integrin alpha 8
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri04510  Focal adhesion
leri04512  ECM-receptor interaction
leri04514  Cell adhesion molecule (CAM) interaction
leri04518  Integrin signaling
leri04810  Regulation of actin cytoskeleton
leri04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:leri00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129710388
   04514 Cell adhesion molecule (CAM) interaction
    129710388
   04518 Integrin signaling
    129710388
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129710388
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129710388
   04810 Regulation of actin cytoskeleton
    129710388
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:leri04515]
    129710388
Cell adhesion molecules [BR:leri04515]
 Integrins
  Integrin alpha subunits
   129710388
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 ITGAX-like_Ig_3
Other DBs
NCBI-GeneID: 129710388
NCBI-ProteinID: XP_055513327
LinkDB
Position
27:29463389..29615512
AA seq 1090 aa
MQPSPTPMLSPHLWHLMGTLLLFSCLPLQLRAFNIDADNPAVYSGSAGSHFGFSVEFYMP
EAASPGILIGAPKANTTQKNVTEGGAVFLCPWSANGSLCSLIPFDTKGDRYIDTYAEIMK
DYKSNQWFGATVKAYKDKIVACAPLYGWQYTKKTYSKTMTSGNTPVGSCLIASANLSTFV
EYSPCRSNLVEEQFSAYVPDQRFCEAGWSCEITEGGEIVMGAPGSFYWQGQLIAANIDQI
IQRYNDKDPLKILSPKRQTEDEKGKQDNIFLGYSLTLGEFTGDSVKEYLVGAPRAKSTLG
SVNILWSTNMTTILTIIGEQVAAYFGYAVAVMDLNSDGRDDILVGAPLFMSQGQDDKLHE
VGRLYLYLQEQPGVFKEPHQTFTGTDKFGRFGSAIASLDDIDYDGYKDVAVGAPMAGEDG
NGRVFIYLGRATGLHQTPFQQLKGTWGPDMMAAGFGFSLKGGLDIDSNNFTDLIVGAHNA
AKVLVYRAKPVITAEAKLTITPSTLNPELKLCNLSKDNPPVTCFIMRMCVTVTGRNAHQH
YVLNAQIELDKNKQRSQRRIRFLPPYEAQEEFEFPPVENEKESCEERTVYLRGETEFKDK
LSPIVVTGSCSLVERANSSGILPTVLSPHSQVLVTEKLRILLNCGPDTVCIPDLKLSAET
DKVHLIAGVSNPLTMVFNASNDGEGAYETELHIPLPPQIDFISVVRGNEKLTKLSCNPVE
FNGTQTVICDLGNPMAAGVKLSTGLHFMAHSLEQVDTVTISMQIKSKNSQNSDSKVVHLK
LQVKALAQLVLRGASQPEQIILPFINFESPSDTVVKNSSLPVIAHVYELHNKGPSAISKA
IVEMDWPADFNGINLLFKSMVEPTNEIKCTVDSIEAENWVLSLSTQSPFTTENIRHELNK
RDVNKPEALVEETILNLTCDVSKCVKIVCHVGRLERNKRAVISIQSTLRMEPFIKNQYKQ
YTFQSRASFIVKEMPYKVEPEEFPSGNTMVESIIECSEPEGAGTVPVWCIIVALLGGLLL
IATVTFILWKVCVWMHLPAENCRCCKSDIITEIAGKHSAGQAASVVDRNSVNVSLEILHQ
NWERDEKNLI
NT seq 3273 nt   +upstreamnt  +downstreamnt
atgcagcctagtcccacaccaatgttgagccctcacctttggcatttgatgggaactctg
ctgttattttcctgtctaccattgcaacttcgtgcattcaatatcgacgctgacaatcca
gccgtttactccggatctgcagggagtcactttggattttccgttgagttctacatgcct
gaggctgccagtccaggtatcctaattggagctccaaaggcaaatacaacccaaaaaaat
gtaactgaaggaggagcagtgtttctctgcccttggtcggctaatggaagtctgtgcagt
ttaataccatttgataccaaaggggaccggtacattgacacgtatgcggaaattatgaag
gattacaaatctaaccaatggttcggagcaactgtcaaagcttacaaggacaaaattgtg
gcctgtgcccccttgtatggctggcagtacacgaaaaagacctattcgaagaccatgact
agcggcaatactccggtgggctcgtgcctgatagcgtccgcgaatctcagcaccttcgtc
gagtattcaccatgtcgttccaacctggtggaggaacagttctcagcctatgttccagat
caacgtttttgtgaagcaggatggagctgtgaaatcacagagggaggagaaatagtcatg
ggagcacctggcagtttttactggcaaggccagttgattgctgccaacattgaccagatt
atccaaagatacaacgacaaagatccgttgaaaatattgagcccgaaaaggcaaaccgag
gatgagaaagggaaacaagataacatcttcctgggctactcgcttaccttgggagagttc
acaggcgactcagtaaaagaatatctcgttggagcccccagggcgaaaagcacattgggt
tctgtaaatatcttgtggtctacgaacatgacaactatactaaccataattggtgagcag
gtggcagcgtactttggctatgcagtggctgtcatggatctaaacagtgatgggagagat
gatattttagttggagctccgctgtttatgagccaaggacaggatgacaaactgcacgag
gtgggacggctgtacctttacttacaggagcaacctggagtcttcaaagaaccgcatcag
accttcaccgggacagacaagtttggcagatttggcagtgccatagccagcctcgacgat
atcgattacgatggatacaaggatgtagcagttggagccccaatggccggtgaagatggc
aatggcagggtgtttatttacctgggacgtgcgactggactccaccaaacaccattccaa
caactgaagggtacatggggccctgacatgatggcggcaggatttggcttttcattgaaa
ggaggcctggatatcgattcaaataatttcacagatttgattgttggtgcccacaatgcc
gccaaagtcctggtctacagggcaaagccggttataacagcagaggccaaactcaccatc
acaccaagcactctgaatccggaattaaagttgtgcaatttgtcaaaagataaccccccc
gtgacatgttttatcatgcgtatgtgtgtaacagtgacagggcgcaatgcacatcagcat
tatgtgctaaacgctcagatagagttggacaaaaacaagcagaggtcccagcgccgaata
cgattcctgcctccgtacgaagcccaggaagagtttgagtttccgccagtagaaaacgag
aaggaatcctgcgaagaacgaaccgtttacctcaggggtgaaactgagtttaaggacaag
ttgagcccgatcgtggtgacggggagctgcagtctggtggagcgagcgaacagctccggc
atcctgcccaccgtgctcagcccgcacagtcaggtcctggtgacggaaaagcttcgtatt
ctcctgaactgtggacctgacaccgtgtgtatcccagatctcaaactctctgcagaaaca
gacaaggtacatttgattgctggagtctcaaacccactcacgatggttttcaatgcatcc
aatgatggagaaggagcatatgaaaccgaactacacatccccctccctcctcaaattgac
ttcatcagtgttgtgcggggtaatgagaaactgactaagctgagctgtaacccagtggag
ttcaacggcactcaaacggtgatctgtgacctcggcaatccaatggcagctggcgtgaag
ttatccacaggactccatttcatggcgcacagcttggaacaggtggacaccgtcacaatc
agcatgcagataaaaagtaaaaactcacaaaattctgatagtaaggtggtccatttgaag
ttgcaagtcaaagctctggctcagcttgttctcagaggggcttcgcagcctgagcagatt
atactcccattcatcaattttgaatcgccttcagatacggtggtgaagaacagcagccta
ccagtgatagcacatgtctatgagctacacaacaaaggcccatccgccattagtaaagcc
attgtggaaatggactggcctgcagacttcaatggcattaatctcttgttcaaatcaatg
gttgaaccaacaaatgaaattaagtgcacggtagactccattgaagctgagaactgggtc
ctgtctttaagcacgcagagtccatttactactgagaacattcgtcatgagttgaataaa
agagatgtcaacaaacctgaagctttagtggaggaaaccatcttaaatttgacctgtgac
gtttccaaatgtgtgaaaattgtgtgccatgtgggtcgtctggagagaaataagagagca
gtgatcagcatacaatccactctcagaatggagcccttcataaagaatcaatacaaacag
tatactttccagtccagagcatctttcattgtgaaagaaatgccgtacaaagtagagcct
gaagaattccccagtggcaataccatggtagaatccatcattgaatgcagtgaaccagag
ggagccgggactgtgccagtctggtgtattattgtggctttgctcgggggcttgctactc
atagctacggtgacattcatcctttggaaggtatgtgtgtggatgcaccttcccgcagaa
aactgcagatgctgcaaatctgacataattactgaaattgctggaaaacattcagcaggt
caagcagcatctgtggtagatagaaacagtgttaacgtttcgcttgagatccttcatcag
aattgggaaagagatgaaaaaaacttaatttga

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