Leucoraja erinaceus (little skate): 129710441
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Entry
129710441 CDS
T09122
Symbol
smyd4
Name
(RefSeq) LOW QUALITY PROTEIN: SET and MYND domain-containing protein 4
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
leri04990
]
129710441 (smyd4)
Domain-containing proteins not elsewhere classified [BR:
leri04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
129710441 (smyd4)
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Gene cluster
GFIT
Motif
Pfam:
SET
TPR_2
zf-MYND
TPR_7
TPR_12
TPR_NPHP3
TPR_16
TPR_10
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
129710441
NCBI-ProteinID:
XP_055513370
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All DBs
Position
28:complement(1667197..1693237)
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AA seq
678 aa
AA seq
DB search
MAGMQGPGLEWRRRCRLHWRHMPDLQRRRFTSNTRLGPLLRLARRWLRPADTAVLDELCA
SWRAGKDRSTALDLKQRGNDSFKARDYPQALSLYTKGLRYMPADSPECALLYANRSAALY
QLHRYQDCVEDIDRAESLGYPPELQHKTQSRLAACLQRLGGSGGGSKESEPPSPAPPAPG
VGECAPGLSLRWEGSRGRHYRACQDVVRGQAVLRETAFAAVLVPGLPSPDHPPTQELLCH
HCLAPATLPLPCPSCSYAQYCGQLCRSTAWHTHHWLDCPLGGHLLALGTGSHLALRTTLR
GAWGEEGALRGEPLGETEVGQRGGAQGEVQVPSSALCVQPAPQPCAGPCSTAGLRAKGWG
RWGRVRGWLHWGVAVLRHMLQLQCNAQAITVLHDTGEGAGSVRDTREVCVGTALYCWASL
LNHSCQPNTTASFQGTRITLRATEPIPAGEQVLHCYGPHWSRQCVRDRRKSLQTQYYFWC
ECSACVAGGAEGSPAPQAQFLCRPCGSALSLEEGGYRCVRCAQLVPPQSLQQQLQQLRLQ
MEGAGNMHSTHTDTALAQLQQCQAGAQSLLPAQHPLHGEIDDSLARVYATRGEWEAAAQH
LQRSVHAVELQYGAGSVELAQQLLKLAQVLFNSRSVCEAESVIDRAIPLLTTHYGADHDT
VAELRAMNSCLRSLPGRS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcggggatgcagggcccggggctcgagtggcggcgccgctgccgtctccactggcgc
cacatgcccgacctccagcgccgccgcttcacctccaacacccggctcggccccctcctg
cggctggcccgacgttggctgagacctgcggacacggctgtgctggacgagctgtgcgcg
agctggcgggctggcaaggaccgcagcaccgctctcgacctgaaacaacggggcaatgac
agcttcaaggccagggactacccgcaggccctctcactctacacaaagggtctcaggtac
atgcccgctgacagcccagagtgtgcgctgctctacgccaaccgctccgccgcactctac
cagctgcaccgctaccaggactgtgtggaggacatagacagagcggagagcctgggctac
ccgccggagctgcagcacaagacgcagtcgcgccttgcagcctgcctgcagcggctggga
gggtccgggggagggagcaaggagtcagagcccccctccccagcgccccctgccccgggg
gtgggggagtgcgcccccggcctctctctgcgctgggagggcagcaggggtcggcactac
cgcgcgtgccaggatgtggtgagggggcaggcggtgctgcgggaaactgccttcgccgct
gtgctggtgcccggcctgccgtccccggaccacccccccacccaggagctgctgtgccac
cactgcctggcccccgccaccctgcccctgccctgcccctcctgcagctacgcccagtac
tgtgggcagctgtgtcgctccaccgcctggcacacacatcactggctggactgcccactg
ggcgggcatctactggccctgggcaccggcagccatctcgccctacgcaccacactgagg
ggggcatggggagaggaaggggcactgcggggggaacctctaggagagacagaagtggga
cagaggggtggcgcccagggagaggtgcaagtccccagcagcgctttgtgtgtgcagcca
gcgccgcagccctgtgctgggccctgcagcaccgccggcctcagggcgaaggggtggggg
cgctggggcagggtgcgcggctggctgcactggggggtggcagtactgcgacacatgctg
cagctgcagtgcaacgcccaggccatcaccgtgctccacgacactggagagggtgcgggg
agtgtcagggacacgcgggaggtgtgtgtgggcacagccctgtactgctgggccagcctg
ctcaaccactcctgccagcctaacaccactgccagcttccaggggacccgcatcaccctc
cgcgccaccgagcctatccccgctggagaacaggtgctgcactgctacggtccccactgg
agtcggcagtgcgtgagggatcggcggaaatctctgcagacacagtactacttctggtgt
gagtgcagtgcgtgtgtcgcggggggggcagagggaagcccggccccacaagcacagttc
ctgtgccgcccctgtgggtccgctctgtcgctggaggaggggggctacagatgtgtccgc
tgtgcccagctggtgcccccacagtctctacaacaacaactgcagcagctgcggctccag
atggagggagccggcaacatgcactccacacacacagacacggccctggcccagctccag
cagtgccaggccggtgcccagagcctcctgcccgcccagcacccgctgcacggagagatt
gatgacagcctggcccgggtctacgccactcgcggggagtgggaagcagcggcgcagcac
ctgcaacggagcgtgcatgcggtggagctgcagtacggggccggcagcgtggagctggca
cagcagctcctcaaactggcacaggtgctgttcaacagccggtcggtgtgtgaagcggag
agtgtgattgaccgggccatcccgttgctcaccactcactacggcgctgaccacgacacg
gtggcggagctgagggcgatgaattcctgtctacggagcctgcccggccggagctga
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