Leucoraja erinaceus (little skate): 129710514
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Entry
129710514 CDS
T09122
Name
(RefSeq) serine/arginine-rich splicing factor 1 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03040
Spliceosome
leri05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129710514
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129710514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129710514
Spliceosome [BR:
leri03041
]
Common components
Common spliceosomal components
SR proteins
129710514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
PRP38_assoc
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
129710514
NCBI-ProteinID:
XP_055513502
LinkDB
All DBs
Position
28:2996201..3002248
Genome browser
AA seq
261 aa
AA seq
DB search
MQNHSGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGSIRDIDLKNRRGGPPFAFV
EFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGGGGGGGGGGGGQT
PRGRYGPPSRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKED
MNYAVRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRTRSRSRSRSRSRSYS
PRRSRGSPRYSPRHSRSRSRS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccacagcggcgttatccgcgggccggcgggcaacaacgactgtcggatctac
gtgggcaacctgccgccggacatccgcaccaaggacatcgaggacgtcttctacaagtac
ggcagcatcagggacatcgacctgaagaaccgccgcggcggcccgcctttcgccttcgtc
gagttcgaggacccgagagacgcggaagatgccgtatatggacgcgatggttatgattac
gatggataccgtctgcgtgttgaatttccacggagtgggagagggactggaagagggggt
ggtggtggtggtggcggcggcggcggcggtggtggcggaggtggtggtggaggtcaaaca
ccaaggggaagatatgggcccccctctaggcgctcagaatacagagtggtggtatcaggg
cttcctccaagtggtagttggcaagatttgaaagatcacatgcgggaagcaggtgatgta
tgttacgctgatgtttttcgtgatgggactggtgtcgtggagtttgttcgcaaggaagat
atgaactatgctgtacgaaagctggataacacaaaatttcgatcacatgagggagaaaca
gcatatatccgtgtgaaagttgacggtccacgaagtccaagctatggaagatctcgttca
cgtagccgcagtcgaaccagaagccgtagccgaagccgcagcagaagccgtagttactct
cccagacgaagcagaggatctccccgctactcaccccgtcatagcagatcgcgctcgcgt
agctag
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