Leucoraja erinaceus (little skate): 129710584
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Entry
129710584 CDS
T09122
Symbol
med13a
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13a isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leri03021
]
129710584 (med13a)
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
129710584 (med13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
129710584
NCBI-ProteinID:
XP_055513673
LinkDB
All DBs
Position
28:10385712..10542260
Genome browser
AA seq
2160 aa
AA seq
DB search
MMSSSGCWVANGASLEDCYSNLFSLADLPGIKWRRYSWQGPVGTPLVIPVAEDDAILCSF
SRCLKANVLCVWRRDMRPGHRELWIFWWGEVPNFADLIHHELKVEENGLWEQGLSYECRT
LLFKAIHNLLERCLLNRNFVRIGKWFVKPYEKDEKPVNKSEHLSCSFLFFLHGDSKVCTS
VEINQHQPVYRLSEEHVTAAQGSSSPIQVILSPFGLNGTLTGQSFKLSDPPTLKLIEEWK
QFYPIKTGSKEATDDKQKELDWDDDSIAAVEVIVAGVRMVYPACFVLVPQPDVAPTVLSN
STGSSHCTAAFPSAHQVPAPMRDPGISSVTLTPPTSPEETETAEIQSTQKWTKLTSVPEG
FNIENSGHGGKIPRKLANQVVENVWQECNLNRTQKKRKFSTVNGCEEDTPDKETSWDFVE
AMQRVNCNCSRHKNKRGTGMQGQSQPPGPQLTTALKHKINDKQEKGDKQQKRPLTPFHHR
NSTCDDVSMEQDSVNHRLGLRPQDSRGRYPNARPSDLSSTKSSQLHMPEMANSPPPPPLS
PHPCERGEDVGDAFKNPLTPHSQSFCQMPAPDPLLPTKAVDDRMETLPTQSFPLGFSEVM
EPTTYSNSAIHLEDEGSAVTWKCYRLPSHAENDFGPPQLPLDKYREEYVAANNSEHAPSS
ASELVVRSNKPLKISDERVQAYIQKINKCYKSCHLEADSKSEVDPYAFDDGDEEFSFPDK
KDKQTTESDPGRKHAQKGDESGGTSHSTLPEEGEDAMSLFNSGTKSDGQKSPSHSRTAST
SLMNELDLVVSYKDLDNLFDDEDELVQAISRSAHVGLDEKMGNRDSKTGPFDVFPCINSA
DLQQMFPTPPSLEQHGPGYSPMNINCKEFGGLDNNPGMTLDGHHFTTSLNHFKVEVEEGM
GSPKPSEIKDFSYVYCPEKCQGYVGCTMFAPLKILPSQCMPSVKLLEECIYRPSWTVGKL
DLLPPVPPMPYIRDINIPSVGSGMDQDYIQTCTPQMHTPFGVTNSAPPSNSGAGVLPSPA
TPRISAPTPRTPRTPRTPRGCGGPASVQGSVKYENSDLYSPASTPSTCRPLNSVEPATVQ
SIPEAHSLYVNLILSDSIMDLFKDCSFDSCCICVCNMNIKGADVGLYIPDPTKESQNPCT
CGFSAVMNRRFGNNSGLFLEDEVDIIGRNTDCSNEAEKRLEDLRNVSLEQGEGGPKEPLK
VPDELILLLQDQCTNPFSPLRSADPSMAAKLRTVGPPVRVEDKDYDRECYMALEQGYQFM
ENMSGGKLDEALLKSSCLHTWSRRNAVDVSMLCSQDLLRLLLSLQPVLQDAIQKKRAVRS
WESIQHVQGPLTWQQFHKLAGRGSYGTDESPEPLPIPTFMLGYECDFLVLSPFALPYWEK
LLLEPYGSQRDIGYVVVCPENEALLNGARSFFRDLSAVYESCRLGQHRPISKLHPDGIMK
VGTKAALKIAEQPINDWFSQHCVNASSEAFSKLKLYAQMCRHDLGPYLAGQTLDSSLLSQ
PNPVSPPTRSTTSLTPLQNSTGAPSAAASNSTPVPASTLTNTAVASTVATATSSVPLASA
SSAVKQSSSFSSFVHLNNSSSAVTTQGSNSQSGQLSQQITGMSTDSATVGAGQQHQDPPE
STMERDKIGVPTDGESHAITYPPSIVVYIVDPFTYNTEDDSSSSSNVWALGLLRCYLEMI
NILPQNIKNAISVQIVPCQYLLQPVKNDDRHLYSQHLKSLAFSVFTQCRRSLPPSTYVKA
LTGFGPGLALDSTLKSPDRPEYLRIYNPPFILAPVKDKQTELGETFGEASQKYNVLFVGY
CLSHDQRWLLGTCTDLYGELLETCVINIDVPNRARRRKGSPRRMGLQKLWDWCLGIMQMT
SLPWRVVIGRLGRIGHGELKDWSCLLGRRTLQSLSRHLKETCRMCGISAADSPSILSACL
VAMEPQGSFVIMPDSVSVGSVFGRGTSLNMQTSQLSTPQDTSCTHILVFPTSAMVQVQTG
NYEINVEEFGIFELLEAEDDLIINLPASPPTPPAHSPGSHYPHGGDTSKGQCTDRQESHD
EVTILQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFLKASLHLHVPSVHSDELLH
SKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPVHFVVLTQLYNFITSML
NT seq
6483 nt
NT seq
+upstream
nt +downstream
nt
atgatgagttcgtccggctgctgggtggcgaacggggcgagtttggaggattgctactcc
aacctcttctctctggctgatctgcctgggattaaatggcgccgttattcgtggcaaggt
cctgtggggacaccactcgtcatcccggtggctgaagatgatgctattctttgcagtttt
agccgttgcttgaaggcgaatgtactttgtgtctggcgaagggatatgagaccaggccac
agagagctttggattttctggtggggcgaagtgccaaattttgctgatctcattcatcat
gaactcaaagttgaagagaatggattgtgggaacagggtctatcttacgaatgccgaact
ctgctttttaaggccattcacaacttgctggaaaggtgtttgttaaatagaaactttgtg
cggattggaaaatggtttgtaaaaccatatgaaaaggatgagaaaccagtgaacaaaagt
gagcacttgtcctgttccttcctgtttttcttgcatggggatagtaaagtctgtaccagt
gttgaaataaaccagcaccaaccagtataccgtctgagtgaagagcatgttactgctgcc
caaggatcctccagccccatccaagtgatcctcagcccctttggattaaatggtacactg
acaggtcagtcattcaagctgtctgatcctcccactcttaaactgatagaagaatggaag
caattctatccaatcaagacaggttcaaaggaagctacggatgacaaacagaaggagcta
gattgggatgatgactcaatagcagctgtagaagtcattgtcgctggtgtgcggatggtg
tatccagcttgctttgtcctggtgcctcagcctgatgttgcgccaactgttctgagcaac
tccactggatcttcgcattgcacagctgcatttccaagtgcccaccaagtgcctgcccca
atgagggatcctggtatttcctctgtgactttgactccacccacatcacctgaagagact
gaaacagctgaaattcaatccacccagaaatggacaaaacttacttctgtaccagaagga
tttaatattgagaattctgggcatggcgggaagatcccaagaaaattagccaatcaggtg
gtagaaaatgtgtggcaggagtgtaatctcaacagaacccagaaaaagcgaaagttttcc
actgtgaatggttgcgaagaagatacaccagacaaagaaacatcctgggattttgttgaa
gccatgcagagagtgaattgcaactgttcaaggcataaaaacaaaagaggcactggtatg
caaggacagtctcaacctccaggtccacaactgacaacagcactcaagcacaaaataaat
gacaagcaagaaaaaggggataaacaacagaagcgaccactaactccattccatcaccgt
aattcaacatgtgatgatgtttcaatggaacaggactcagtgaatcacagacttggactc
aggccgcaagacagtagagggaggtatccaaatgcaaggcctagtgaccttagctcaaca
aaatcctctcagttacacatgccagagatggcaaattcaccaccaccaccaccactcagt
cctcatccgtgtgagaggggtgaggatgttggagatgcatttaaaaacccattgacgcct
cacagtcaatcattctgccagatgcctgcaccagatccactacttccaaccaaagctgtt
gatgatcggatggagacacttcccacgcagtctttcccattgggtttttccgaagtgatg
gagcctacaacctacagcaacagtgcgatccatttggaagatgaaggctctgctgtcacg
tggaagtgttatcgactgcccagtcatgcggaaaatgattttggtccaccacagctgcca
ttggataaatacagggaggagtacgttgcagcaaataactcagaacatgcaccttcatct
gcctctgagttggtggtgcgctcaaataagccattaaagatttctgatgaacgggttcaa
gcgtacattcagaaaataaacaaatgttacaaaagctgtcacctggaggctgattccaag
tctgaagttgatccatatgcatttgatgatggagatgaggagttcagctttcctgataag
aaagacaagcaaaccactgagagtgatcctggaaggaaacatgcacagaagggagatgaa
agtggtggcacgtctcactcaacattaccagaagaaggagaggatgctatgtcattattc
aattccggaacaaagtcagatggacagaagtcaccctcgcacagtcggactgcatccacc
agtctcatgaatgagcttgatctggttgtttcatacaaagaccttgacaatctatttgat
gacgaggatgaacttgtgcaggctatttctcgatctgcacacgttggattggatgaaaaa
atgggcaacagggattcaaaaactgggccttttgatgttttcccctgtataaattctgca
gatctccagcaaatgtttcccacacctccatccttggagcaacatggtccaggctactct
ccaatgaatattaactgcaaagagtttggaggcttagacaacaacccaggaatgacactg
gatggccatcattttactacaagcctgaatcatttcaaggttgaagtagaggaggggatg
ggtagccctaaaccctctgagatcaaggacttttcttacgtctattgccctgagaagtgc
caaggttatgtgggctgcactatgtttgcaccattgaaaatcttaccaagccagtgcatg
ccttctgtcaaattgctggaggagtgtatttatcgtccttcgtggactgttggcaagcta
gacctgcttcctcctgtacctcccatgccatatatccgggacattaacattcccagtgtt
ggcagtggtatggatcaagactacattcagacttgcacaccgcaaatgcatactccattt
ggagtgacgaatagtgctccgcccagtaatagtggcgctggtgtccttccatcacctgcc
actccacgcatttctgcaccaactccgagaacaccaaggactccgcgcactcctcgtggt
tgtgggggtccagccagtgtccaaggctcggtgaaatatgagaattccgatttgtactcg
cccgcctcaacaccttcaacttgtcgcccattaaattccgtagaacctgcaacagtgcaa
tccatcccggaggcacacagcctttacgtgaacttaattttatctgattccattatggat
ctctttaaagactgtagtttcgacagctgctgcatctgtgtctgcaacatgaacatcaaa
ggagccgatgttggcttatacatcccagaccctaccaaagaatctcagaacccctgcaca
tgtggatttagtgctgtcatgaaccgaaggtttggaaacaactctggactctttttggag
gatgaagtggatatcattggacgaaatacagattgcagtaatgaggctgaaaaacgatta
gaggacctcaggaatgtttctcttgaacaaggagaaggaggccccaaggagcctttgaaa
gtgcctgatgagttaatattgctacttcaggaccagtgcactaatcccttctctccgttg
agatctgcggatccttcaatggcggcaaaattgcggacagtgggaccgccagtacgtgtg
gaggataaagattacgatagggaatgctacatggcgttggaacagggatatcagttcatg
gaaaatatgtcaggagggaagctcgatgaagcactcttgaaaagctcttgtttacataca
tggtcaagaagaaatgctgttgacgtcagcatgctgtgttcacaagatcttctgcgcctg
cttctctcactacaacctgtgctgcaggatgccattcaaaagaaacgagcagtcaggtca
tgggagagcatacagcatgtccaagggcctctaacctggcaacagttccacaaattggct
gggcggggttcttatggtacagacgagtctccagagccattacccatcccaacatttatg
ttgggctatgaatgtgattttctggtgttatctccatttgcattgccatattgggaaaaa
ttactccttgaaccatacggatcacagagggatattgggtatgtggtggtatgtccagaa
aatgaagcgcttttaaatggagcaaggagtttttttcgtgacctcagtgcagtctatgag
tcctgcagacttgggcagcacaggcccatttcaaaattgcatcctgatggcatcatgaaa
gtggggaccaaagcagccttgaaaattgcagagcagcccataaatgattggttctctcag
cactgtgtgaacgctagcagtgaagcattttccaaactgaagctttacgctcaaatgtgc
agacatgatctaggcccatatcttgctggtcaaacactggacagttctttgttgtcacaa
cccaaccctgtttccccacccactcggtccactacttctttgactccattacagaattct
actggggctccatctgctgcagcctccaactccactcctgtacctgccagtactttaaca
aacactgctgtagcctccacagtcgctactgccacttcgagtgtgcccttggccagcgca
tcatcagctgtgaaacagtcttcctccttttcatcatttgtacatttgaacaactcgtcc
agcgctgtgacaacacagggatcaaactcccagagtggacaactatcccagcagattact
ggaatgtctactgactcagcaacagttggagcagggcagcagcatcaggatcctccagag
agcaccatggaaagagataaaatcggggtcccaactgatggggaatcacatgctatcacg
tacccaccatctattgttgtatacattgtggatccttttacgtataatacggaagatgac
agttcatcgtcttcaaatgtttgggcactcgggctattacgttgctacttggaaatgatt
aatatcttaccccagaacatcaaaaatgcaatatctgtacagattgttccatgtcagtat
cttttgcaacctgtgaaaaatgatgatcgacacctctattcccagcaccttaaatcattg
gcattttctgtgttcacgcaatgtcggagatccttgccaccttccacctatgtcaaagca
ctgactggttttggcccaggactggccttagacagcaccttaaagagtccagataggccg
gagtatttacgtatttataatccaccatttattttggctcctgtgaaggataagcagact
gagctgggggagacatttggagaagcaagccagaagtacaatgttctttttgttggttat
tgcttgtcacatgaccagcgatggctgcttggaacgtgtacagatctctacggagaactg
ttggaaacctgcgtcattaatatcgatgtaccaaacagggctcgcaggcggaaaggctcg
cccaggagaatgggtttgcaaaagctctgggactggtgtttgggtattatgcaaatgaca
tcactgccttggagggttgtcattggacgccttgggagaataggacatggagagttgaaa
gactggagttgcttactcggtcgtcgcactttgcagtccctcagccggcatctaaaggag
acatgcaggatgtgtggtatttctgcagctgattctccaagcatacttagtgcttgcttg
gttgcaatggaaccacagggatcatttgtgatcatgcctgactctgtgtccgtgggatca
gtgtttggccgtggtacatctctcaacatgcagacttcacagctgagcacaccacaggat
acatcatgcacacacattctggtgtttccaacctcggcaatggtgcaggtgcaaactggg
aactacgaaataaatgttgaggaattcgggatctttgaattactggaagcagaagatgat
ctaataattaacttgccagcatctccacccacaccaccggcacattcaccaggttcgcat
tatccacacggcggcgatacaagcaagggacagtgcacggatcgtcaagaatctcatgac
gaggtaaccattttgcagcagcccctggcactaggatattttgtctcgacagctaaggct
gggccacttcccgattggttttggtcagcctgtcctcaagcacagaaccaatgtccactt
tttctcaaggcctccttgcacctccatgtgccttcagtgcattcagatgaattgctccat
agtaagcactcccacccacttgattcaaaccaaacctctgatgtgctcaggtttgttctc
gaacagtacaacgctctttcttggctgacctgtgaccctgccactcaggaccgccgctcc
tgcctccctgttcattttgtggtgctgacgcagctgtacaacttcatcacaagcatgttg
tag
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