Leucoraja erinaceus (little skate): 129710687
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Entry
129710687 CDS
T09122
Symbol
rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129710687 (rffl)
Enzymes [BR:
leri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
129710687 (rffl)
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
129710687 (rffl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
Prok-RING_4
FYVE_2
HeH
FYVE
zf-RING_2
zf-C3HC4_2
MUG2_C
Motif
Other DBs
NCBI-GeneID:
129710687
NCBI-ProteinID:
XP_055513827
LinkDB
All DBs
Position
28:15603265..15635658
Genome browser
AA seq
356 aa
AA seq
DB search
MWASCCNWFCVDNQTMDEPEYTPRRQAYTNAGYNSQSPPCGLENTCRACGSQFENASRKH
VCVDCKKSFCTSCSIQSENSPKICHTCQRFRTTDFHRGELMKLKVKELRDYLHLHEISME
MCREKSDLVDLVMGQQPQSAPSSQVHIPLYRMDISEQQTFMSNAPTGTTASTSHDAPPPY
GATNPNSPRNSQEPNLANTEVSGGNQNETSAQNDDETESVNSEEIIAPGRHRASLSDLTC
VEDIEGLSVRQLKEILARNFVNYKGCCEKWELMERVTRLYNEQRDLQNHAAELKTQDGGT
GTSVDENLCKICMDSPIDCVLLECGHMVTCTKCGKRMSECPICRQFVIRAVHVFRS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcctcctgctgcaactggttctgcgtggacaaccagacgatggatgaacctgaa
tacactcctagaaggcaggcgtacactaacgcgggctacaattctcagtcacctccatgt
ggattggaaaacacatgtagagcgtgcggttctcagtttgaaaatgcctcacggaagcat
gtctgtgttgattgtaagaagagcttttgcacatcttgttcaatccaatctgaaaatagc
cctaaaatatgccacacttgccagagatttcgcaccaccgacttccaccggggagaactg
atgaaactgaaagtgaaagaattgcgtgactacctacatctacatgaaatttcaatggaa
atgtgccgagagaaatctgatctggtagatttggtaatgggacagcaacctcagtccgca
ccatctagtcaggtgcatattcctctttatagaatggatatatctgaacaacagaccttt
atgtcaaatgcacccacagggacaacagcatctacctctcatgatgctcccccaccgtat
ggagcgaccaacccaaatagcccaagaaattctcaggaaccaaacctggcaaacacagaa
gtgagtggaggaaatcagaatgagacttcagcacaaaatgatgatgagactgagtccgtc
aattcagaggagataattgccccaggccggcatagagcatctttatcagacttgacttgt
gtggaagatattgaaggtctatcagtacgccagctaaaagaaatactagctcgaaacttt
gtaaattacaaagggtgctgtgaaaaatgggagttaatggagcgagtgacaagattatac
aatgaacaaagagatcttcagaatcatgctgctgaacttaaaacacaagatggtgggaca
ggaacttcggttgatgagaatctctgtaaaatatgcatggactctccaattgactgtgtg
ctacttgagtgtggccatatggtcacgtgtactaagtgtggaaagcgcatgagtgaatgc
ccaatttgtagacagtttgtcataagggccgtgcatgtcttcagatcttaa
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