KEGG   Leucoraja erinaceus (little skate): 129710688
Entry
129710688         CDS       T09122                                 
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri03030  DNA replication
leri03410  Base excision repair
leri03420  Nucleotide excision repair
leri03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:leri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    129710688 (rfc2)
   03410 Base excision repair
    129710688 (rfc2)
   03420 Nucleotide excision repair
    129710688 (rfc2)
   03430 Mismatch repair
    129710688 (rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:leri03032]
    129710688 (rfc2)
   03036 Chromosome and associated proteins [BR:leri03036]
    129710688 (rfc2)
   03400 DNA repair and recombination proteins [BR:leri03400]
    129710688 (rfc2)
DNA replication proteins [BR:leri03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    129710688 (rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    129710688 (rfc2)
Chromosome and associated proteins [BR:leri03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    129710688 (rfc2)
DNA repair and recombination proteins [BR:leri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     129710688 (rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    129710688 (rfc2)
SSDB
Motif
Pfam: Rep_fac_C AAA AAA_lid_RFC1 DNA_pol3_delta2 RCF1-5-like_lid AAA_16 AAA_22 Viral_helicase1 nSTAND_NTPase5 Mg_chelatase AAA_14 Rad17 AAA_11 AAA_assoc_2 RuvB_N TniB nSTAND3 DNAX_ATPase_lid AAA_19 AAA_18 MipZ AAA_24 AAA_5 AAA_28 AAA_25 AAA_30 ABC_tran AAA_23 NTPase_1 MeaB AAA_3 FtsK_SpoIIIE SLFN-g3_helicase
Other DBs
NCBI-GeneID: 129710688
NCBI-ProteinID: XP_055513829
LinkDB
Position
28:complement(15576673..15603108)
AA seq 352 aa
METASGADPEPAESEGPSGSAAGPSAPAAPTYELPWVEKYRPLKLNEVVGNEETVSRLEV
FAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKM
FAQQKVTLPKGRHKIIILDEADSLTAGTQQALRRTMEIFSKTTRFALACNASDKIIEPIQ
SRCAVLRYTKLTDAQVLTRLMQVVEKENVQYTDDGLEAIIFTAQGDMRQALNNLQSTHSG
FEFVNSDNVFKVCDEPHPLLVKEMIQHCVNANIDEAYKVVAHLWKLGYSPEDIIGNIFRV
CKTFQMQEYLKLEFIKEIGYTHMRIAEGVNSLLQMAGLLARLCQKTAAPPAS
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggagacggcgagcggcgcggacccggagccggcagagtctgaggggccgagcggcagt
gcggcgggaccgagcgcaccagctgcgcccacgtacgagctaccctgggttgagaagtac
agacctttgaaactgaacgaagttgtcgggaatgaagaaacagtcagtcgactggaggtc
ttcgcaagagaaggaaatgtaccaaacatcattattgcaggccctcctgggactggaaaa
acaaccagcatcttgtgcttggctcgggcacttttgggtcctgcattaaaggatgctgtt
cttgaactcaatgcttcaaatgaccgaggtattgatgtggttagaaacaaaattaaaatg
tttgcccagcagaaggttacgttaccaaaaggtcgtcacaagatcatcatcctggatgaa
gcagacagtcttactgctggcacccaacaagccctaaggaggacaatggagattttctct
aaaaccacacgttttgcactggcatgcaatgcttcagataaaatcatagaacctatccag
tctcgttgtgctgttctacgttacacaaagcttactgatgcccaggtccttacacgacta
atgcaggtggttgagaaggagaatgtccaatacacagatgatggactagaagctatcatc
ttcacagcacaaggagacatgagacaggctttgaacaacttgcagtcaacacattcagga
tttgagtttgtgaacagtgacaatgttttcaaggtgtgcgatgaacctcatcctctcctg
gtaaaagaaatgattcagcactgtgttaatgcaaacattgatgaagcatataaggttgtt
gctcatctttggaaattgggctattcacctgaggacatcattggcaacattttcagagtc
tgtaaaacgttccagatgcaggagtacctgaaactggaatttataaaggagattggatac
actcacatgaggattgcagaaggagtgaattccttgctacaaatggctgggttactcgct
cgactttgtcaaaagactgcagctccacctgcaagttga

DBGET integrated database retrieval system