Leucoraja erinaceus (little skate): 129710688
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Entry
129710688 CDS
T09122
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03030
DNA replication
leri03410
Base excision repair
leri03420
Nucleotide excision repair
leri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129710688 (rfc2)
03410 Base excision repair
129710688 (rfc2)
03420 Nucleotide excision repair
129710688 (rfc2)
03430 Mismatch repair
129710688 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
leri03032
]
129710688 (rfc2)
03036 Chromosome and associated proteins [BR:
leri03036
]
129710688 (rfc2)
03400 DNA repair and recombination proteins [BR:
leri03400
]
129710688 (rfc2)
DNA replication proteins [BR:
leri03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
129710688 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
129710688 (rfc2)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
129710688 (rfc2)
DNA repair and recombination proteins [BR:
leri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
129710688 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
129710688 (rfc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
AAA_lid_RFC1
DNA_pol3_delta2
RCF1-5-like_lid
AAA_16
AAA_22
Viral_helicase1
nSTAND_NTPase5
Mg_chelatase
AAA_14
Rad17
AAA_11
AAA_assoc_2
RuvB_N
TniB
nSTAND3
DNAX_ATPase_lid
AAA_19
AAA_18
MipZ
AAA_24
AAA_5
AAA_28
AAA_25
AAA_30
ABC_tran
AAA_23
NTPase_1
MeaB
AAA_3
FtsK_SpoIIIE
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
129710688
NCBI-ProteinID:
XP_055513829
LinkDB
All DBs
Position
28:complement(15576673..15603108)
Genome browser
AA seq
352 aa
AA seq
DB search
METASGADPEPAESEGPSGSAAGPSAPAAPTYELPWVEKYRPLKLNEVVGNEETVSRLEV
FAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKM
FAQQKVTLPKGRHKIIILDEADSLTAGTQQALRRTMEIFSKTTRFALACNASDKIIEPIQ
SRCAVLRYTKLTDAQVLTRLMQVVEKENVQYTDDGLEAIIFTAQGDMRQALNNLQSTHSG
FEFVNSDNVFKVCDEPHPLLVKEMIQHCVNANIDEAYKVVAHLWKLGYSPEDIIGNIFRV
CKTFQMQEYLKLEFIKEIGYTHMRIAEGVNSLLQMAGLLARLCQKTAAPPAS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggagacggcgagcggcgcggacccggagccggcagagtctgaggggccgagcggcagt
gcggcgggaccgagcgcaccagctgcgcccacgtacgagctaccctgggttgagaagtac
agacctttgaaactgaacgaagttgtcgggaatgaagaaacagtcagtcgactggaggtc
ttcgcaagagaaggaaatgtaccaaacatcattattgcaggccctcctgggactggaaaa
acaaccagcatcttgtgcttggctcgggcacttttgggtcctgcattaaaggatgctgtt
cttgaactcaatgcttcaaatgaccgaggtattgatgtggttagaaacaaaattaaaatg
tttgcccagcagaaggttacgttaccaaaaggtcgtcacaagatcatcatcctggatgaa
gcagacagtcttactgctggcacccaacaagccctaaggaggacaatggagattttctct
aaaaccacacgttttgcactggcatgcaatgcttcagataaaatcatagaacctatccag
tctcgttgtgctgttctacgttacacaaagcttactgatgcccaggtccttacacgacta
atgcaggtggttgagaaggagaatgtccaatacacagatgatggactagaagctatcatc
ttcacagcacaaggagacatgagacaggctttgaacaacttgcagtcaacacattcagga
tttgagtttgtgaacagtgacaatgttttcaaggtgtgcgatgaacctcatcctctcctg
gtaaaagaaatgattcagcactgtgttaatgcaaacattgatgaagcatataaggttgtt
gctcatctttggaaattgggctattcacctgaggacatcattggcaacattttcagagtc
tgtaaaacgttccagatgcaggagtacctgaaactggaatttataaaggagattggatac
actcacatgaggattgcagaaggagtgaattccttgctacaaatggctgggttactcgct
cgactttgtcaaaagactgcagctccacctgcaagttga
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