Leucoraja erinaceus (little skate): 129710771
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Entry
129710771 CDS
T09122
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129710771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129710771
Enzymes [BR:
leri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129710771
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129710771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
Zn_ribbon_IFT122_C
Motif
Other DBs
NCBI-GeneID:
129710771
NCBI-ProteinID:
XP_055513982
LinkDB
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Position
28:complement(21525828..21701450)
Genome browser
AA seq
851 aa
AA seq
DB search
MRSAALLLLAAQWLWTAALAAATSHDSESLPAAETDAVIEVVQYRHSRDGMVANNSTLRL
QGHFAGAGMRVAAEGKLLQFHPLWLCNTSEDEQQEYDFVSMIKLERPDRDPHPCLSLFEK
AKFAIQRGATAVIFDVTDDSSAVGQLKQNPEDLLPRPVILIRGLDAAQLMNVINTIGEAV
VKIHVKDNLVGRPAYDVGILMTLIVAFSVVVMILAVRIKCKQNRTRNSLQQQTINAISRL
ATRRYRSRCRPQEHERQSSLDSQGSSMSEPVCAICLEEFANGQDLRIISCFHEFHKECVD
PWLLQHRTCPLCMYNIIEGSSTIAQQEVPERAAPAAQLNQRIHLFRRYPGHTHLHRPNTA
IPSRAPHLNNPRTQGMPSGHRFVTPEVYPMGFNTVRYVAARPRQPPALHRCNYHHSEGQG
VSYRHHRPFTVRKGPPWPDKPHHGPFLHKPPCRQQQQLAACSVPLSSHHLKPNCAPLRSQ
LTSNHDNCSLSGDSFGINCSVRSGYLADSPGSDSSSGPCHCSSSDSTLDCTDISNRCIYG
SHSTFRSSLSSEYDPLVYCGASEESIKSLSFDEQRPRSLDSAGGPQDDCVLSHTHYHHHR
HHHYTDAHPSPKDEHCRSASQRQDGEPLDNYMGDFQHCQHQVEFACQSQYTPTQCSCLER
RLLLPPGLCLPETSLQKGDAETDKSKAACAKAKPVPSETKSNRGSKRRKRKSNFQVDPPV
VYFHQDCDAMEDCRVHIHYDNTGNQRHPPNIQPSVPVPLVLNSGAASEWPFPFCECRNPH
CQQPLPQVGSESMLPGEQHVSNGDQGHPFQDGCSERHCDREPVQDKSFYCQAFPSNPGTK
SNVEEICEEAV
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcgcagcgctgctgctgctggctgcgcaatggctatggaccgcggcgctggcg
gcggcgacgagccacgactcggagtcgttgcccgcggcggagacggacgcggtgatcgag
gtggttcagtatcggcacagtcgggacggcatggtggcgaacaacagtaccctccgcctc
cagggccacttcgctggggccggcatgagagtggcagccgagggcaagctcctgcagttt
caccctctgtggctgtgtaacaccagtgaagatgagcaacaggaatatgattttgtcagt
atgatcaaattggagagacctgatcgagatccacatccttgtctctcgctcttcgaaaag
gccaagtttgctattcagagaggtgccacagcagtgatctttgatgtaactgatgattca
agtgcggtgggtcagctcaaacagaacccagaagatctgttgcctcgtcccgttatcctg
atccgaggcctggatgctgcccagctaatgaatgtcatcaacaccattggtgaagcagtg
gtcaagattcacgtgaaggataacttggtgggtcggccagcctatgatgtgggaatcttg
atgactctgatcgttgctttctcagtggttgtcatgatcctggccgtgagaatcaagtgc
aagcagaaccgaactcggaattccttgcagcaacagacgatcaatgcaatcagccgactg
gccacccgtcgctaccggtcacgatgccgcccccaggagcacgaacggcagagcagcctg
gattcccagggcagcagcatgtcagagcccgtgtgtgccatctgtctggaggagtttgcc
aatgggcaggatctccggataatatcttgtttccacgagtttcacaaggaatgtgtggat
ccctggcttcttcaacatcgtacctgcccactctgcatgtacaacatcattgagggaagc
tcaacaattgcacaacaggaagttcctgagcgagctgcaccggctgctcaactgaaccag
cgaatccacctgttccgccgttatcctggacacacccatcttcaccgacccaacactgcc
atcccttccagagcacctcacctgaacaaccccagaactcaagggatgccctctggtcat
cgctttgtaacaccggaggtctaccccatggggtttaacaccgtgcgatatgtggcggca
agaccccggcagcctcctgcgctacacaggtgcaactatcaccacagtgaggggcagggc
gtctcctacaggcaccacagacccttcaccgtgcggaaaggcccgccctggcctgataaa
cctcaccacggacccttcctgcacaagcctccctgtcggcagcagcagcagcttgcggca
tgcagcgtgcctctgtcgtcgcatcatttaaaaccgaactgtgcaccgctgcgctcgcag
ctcaccagcaaccatgacaactgcagcctctcgggggacagttttggcatcaactgctcg
gtgcgcagcggatacctggcagatagcccaggtagtgactccagctcgggtccctgccac
tgctcctccagcgactccacgctggactgcacggacatcagtaaccgttgtatttatgga
agccactcgactttccgcagctctctaagcagcgagtacgatccgctcgtgtactgtggg
gcaagtgaggagagcatcaagtctttgtcgtttgatgagcagaggcccaggtccttggac
tcagccggtggtcctcaggatgactgtgtgcttagccacacccactaccaccaccaccgg
caccatcattacaccgacgctcacccgagccctaaagatgagcattgcaggagcgcgtca
cagaggcaggacggcgagccgctagacaactacatgggcgactttcagcactgccagcat
caggtggagttcgcctgccaatcccagtacacccccactcagtgttcctgcttggagcgg
cgcttattgcttccccctgggctctgtcttcccgagacctcgctgcaaaagggcgacgcg
gagacggacaagagcaaagcggcgtgcgccaaagccaaaccagtgccttcagaaacaaag
tccaatcggggcagcaagaggaggaagaggaagagtaatttccaggtggatcctcccgtg
gtttacttccatcaggactgtgatgctatggaggactgcagggtacacattcactacgac
aacactgggaaccagcgccaccctcctaacattcagccatcagtgccggtccctttagtc
ctcaacagcggagctgccagtgagtggcctttcccgttctgcgagtgtcgcaacccccac
tgtcagcaaccactgccccaggtcgggtccgaatccatgctacccggggagcagcatgtg
agcaatggggatcaaggccaccccttccaagacggctgtagtgaaagacactgtgaccga
gaaccagttcaagacaagtccttctactgccaggcattccccagcaatccaggtaccaaa
tcaaacgtggaagagatttgtgaggaagccgtgtaa
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