Leucoraja erinaceus (little skate): 129710801
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Entry
129710801 CDS
T09122
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit D-like
KO
K15215
TATA box-binding protein-associated factor RNA polymerase I subunit D
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leri03021
]
129710801
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
129710801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1D
Motif
Other DBs
NCBI-GeneID:
129710801
NCBI-ProteinID:
XP_055514026
LinkDB
All DBs
Position
28:25364353..25376284
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AA seq
485 aa
AA seq
DB search
MSRLKKKMEHSRGAGNVQADADADEDRNSVLLFSDNENEAKHLRKTVRVKTVTKQAVSST
DHIGQAIPICSSDSSDTINSLFKTQSQSAPVANKRRKSTRTPSTRLDVTCQSRLDSEISD
SDDDRGYPSILKNGKVKRKQRRKASTSSHGRKKPAQRRGRPQSSTTTAGKRNKLKDRGLE
FSFVEQEYGTKDLPFKMIYAYEQAALCGLFDYMKELKCQNHLITSLKNIDVDCTDRESGP
TRQYKYLDENGPLSPISENSDETCIENLEIEEAIDVKIVENSCFIVEKPEKKKKRLRKMH
CDGKNKRQHVKSGKNKHKHEAKGKSKDHVKHKQETVEEKNHVIQNLPPHVPFKLKSSKIT
KGKVADQTAVDPCCLQNTSRPLDKQADEEMEATLSRKKSKSNKDSKKITGHRKEHSASQE
ENVPESALTMCQKVLCNGTPQSNISQERNNSAEQANKGAKLSSKSVLKKKHKLYNGNGYF
TGSPL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgacttaaaaagaaaatggaacattcaagaggtgctggcaatgtgcaagcagat
gcagatgcagatgaagatagaaatagtgttttgctattttcagataatgagaatgaggct
aagcatttgcgaaagactgttcgagtgaaaacagttactaaacaagccgtctccagcaca
gatcacattggtcaggctatccccatttgttcaagcgatagctcagatacaataaacagc
ttattcaagacacagtctcaatccgcaccggtggccaataagaggaggaaaagtacaaga
acaccttcaaccaggttggatgtcacatgtcaaagtcgacttgattctgagatctctgat
tcggatgacgatcgagggtatccaagcatcttgaaaaatggtaaagtaaaaagaaagcaa
cggcgcaaggcatccaccagcagccatggccgtaagaaacctgcccagcgaagaggaagg
ccccaatcatccacaactactgcggggaagaggaacaagttgaaggaccgggggcttgag
ttttcatttgtggaacaagaatatggaacaaaggatttgccatttaagatgatttatgca
tacgagcaagcggcgttgtgtggattatttgattacatgaaggagctaaaatgtcaaaac
cacctcataacatccttaaaaaatatagatgtggactgtacagatagagagagtggtcca
accagacaatacaagtacctggatgagaatggaccactttctcccatatcagaaaacagc
gatgaaacctgtattgaaaacttggaaatcgaagaggctattgatgtaaaaattgtggag
aacagctgcttcatagtagaaaagcctgaaaaaaagaaaaagcgcttgaggaaaatgcat
tgcgatggaaaaaataaaaggcaacatgtaaagagcggtaaaaataaacacaagcatgaa
gccaagggtaaaagtaaagatcacgttaaacataaacaggaaactgtagaagaaaagaac
catgtgatacaaaatctcccaccgcatgtgccttttaagttgaaatcaagcaagatcacg
aaaggaaaagtagcagaccaaacagctgttgatccttgctgcctacagaacaccagcagg
ccattagataaacaggcggatgaagaaatggaggctacactttctcggaagaaaagcaaa
tccaataaagactcaaaaaagattacgggacacaggaaagagcactcagcatcgcaagaa
gagaatgttccagaaagtgcattaacaatgtgccagaaagtcctttgcaatggcacccct
caaagtaatatttcgcaagagaggaacaattctgcggaacaagccaacaaaggcgcaaaa
ttatcatcaaagtcagttctaaaaaagaagcataaactctataatgggaacggttatttc
actggttcaccattgtaa
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