Leucoraja erinaceus (little skate): 129710822
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Entry
129710822 CDS
T09122
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129710822 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129710822 (rabgef1)
Membrane trafficking [BR:
leri04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
129710822 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
129710822 (rabgef1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
SSTK-IP
Syntaxin
Motif
Other DBs
NCBI-GeneID:
129710822
NCBI-ProteinID:
XP_055514057
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All DBs
Position
28:complement(26698274..26728447)
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AA seq
490 aa
AA seq
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MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYSKARQRQIQEDWELAER
LQREEEAAYASSQGAPSLTFSKFEEKKTNETKRKVQTVKKFFSPSSRAAPKKDSQEVKAS
SPSINRQASLETERASKDFIDFLKGFRRPGQDILKQCRGFIEAMQHKKELNIEEQSEYVQ
DFYQNMVDRLQSHSSFKGSPEGIEKIMDQIENYIMTRLYKTVFCPETTDDEKKDLAVQKR
IRALHWVTLEMLCVPVNEEIHEVYELVVRAITAVIEMDSRRVPREKLTCITKCSKQIFNA
IKITKNEPASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCC
AVAFIEKLDAQSLNLTEEDFDRYMSGQSSPKKHDSEEWSPEECAGMKQMYKNLNLISQLN
DRQQRIISTAKQLEKDLIDWSEGVTKEVEDIIEKYPLDIKPKGQSVVAIDSDNVENDKLP
PPIQPQMFLG
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgaaatcggagcgtagaggaatccatgtggaccaatcagagctactatgtaag
aaaggttgtggttactatggaaatcctgcctggcaaggattctgttccaagtgctggaga
gaagagtacagtaaagcgagacagcgccaaatacaagaagattgggagcttgcagaacgt
ttacagcgggaggaagaagctgcatacgccagcagtcagggggctccgtcgctaactttc
tctaagtttgaggagaaaaaaacaaatgagactaaaaggaaagtccagactgtcaaaaag
ttcttcagcccctcatccagggctgcaccaaaaaaagacagccaggaagtcaaagcctca
agtccctccataaataggcaggccagccttgagacagaacgagcttccaaggactttatt
gacttcctcaagggcttccgcaggcctgggcaagatatactgaaacaatgtaggggattt
attgaagctatgcagcataaaaaggaattgaacattgaggagcagtcggagtatgtccag
gacttctatcaaaacatggtcgaccgattgcagtcacactccagttttaaaggttctcct
gaagggatagaaaagatcatggaccagattgaaaactatatcatgacacgactctacaaa
actgtgttttgcccagagactactgacgacgagaagaaagatcttgcagttcagaaacga
attcgggcattgcattgggtgacacttgaaatgctgtgtgttccagtaaatgaggaaatc
catgaggtttacgaattagttgtcagagcaatcactgctgtaattgaaatggattcaagg
cgtgttccacgtgaaaagttgacctgcatcactaaatgcagcaaacagattttcaatgcc
ataaagatcacaaagaatgaacctgcttctgcagatgacttcctacccacactaatctac
attgtgttaaaggcgaatcctcctcgcttacagtcaaacatccagtatattacacgattc
tgcaatccaagccgactgatgactggtgaagatgggtattacttcacaaatttatgttgt
gcagttgccttcattgaaaagctggatgctcagtctttgaatttaacggaagaagacttt
gatcgttacatgtctggccaatcatcacctaagaagcatgactctgaggaatggtctcct
gaagagtgcgcaggaatgaaacaaatgtacaagaacttaaatcttatttcacagttgaat
gataggcagcaaagaataatttcaacggccaagcagcttgaaaaagacttaattgactgg
agcgaaggtgtgaccaaagaggttgaagatattattgagaaatacccacttgatatcaaa
cccaagggccagtcagtggtggcaattgattctgacaatgtagagaacgacaagcttccg
ccaccaatccagccgcagatgtttcttggctga
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