Leucoraja erinaceus (little skate): 129710845
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Entry
129710845 CDS
T09122
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leri03021
]
129710845 (supt6h)
03036 Chromosome and associated proteins [BR:
leri03036
]
129710845 (supt6h)
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
129710845 (supt6h)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
129710845 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Spt6_S1
Tex_central_region
HHH_9
HHH_3
S1
Tex_YqgF
SH2
S1_RRP5
Tex_N
Motif
Other DBs
NCBI-GeneID:
129710845
NCBI-ProteinID:
XP_055514098
LinkDB
All DBs
Position
28:28512247..28581130
Genome browser
AA seq
1721 aa
AA seq
DB search
MSDFVESEAEESEEEYDEEGTVVPKKPKKFLEDDDEEEEEEDENADDQDEQGNLKDFIND
DVEDDEEEEEEEDAGSQGSGGSDSIAKKRKRKTYDDRLEDDDFDLIEENLGVKVKRQQKF
RRVKKVSDDEDEEEEETAKKGHEKEAIADELFPEYEGEEGEQVEVPVVAPEEEEEEEDEE
SDIDDFIVDDDGQPLKKPKWKRKFPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEE
EYEFEDEELGEGETRVRPKKTAKKRVSRRSIFEIYEPSELESSHLTDQDNEIRVTDMPER
FQLRGIPVKPCEDDELEEESEWIYRNAFSTPSISLQESSEYLERGQGISNFSRKGPATIQ
KIKEALNFMRNQHFEVPFIAFYRKEYVDPELNINDLWKLWQWDEKWTQLKTRKENLNRLF
QKMQAYQYEQISADPDKPLADGVRALDTADLERLKDVQSNDELQDVYNHFLLYYGRDIPK
MQNALKPSKKKYKKSQQVGEDEEEGERDEEVEDDERHGPELKQASRRDMYTICQNAGLDG
LAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEVVLEGSRYMVAM
QIAREPLVKQVLRQTFQERAKINITPSKKGKKDIDEVHYAYSFKYVKNKPVKELRDDQFL
KICLAEEDGLLSMEICIDMKGLDSYGNEQTYFDEIKQFYYRDEFSHQVQEWNRQRSMAIE
RALNQFLYPLMGKELKNKLLIESRDYISKCCSRKLYNWLKVAPYRPDQQNDEDDDDFMEE
SQSKGVRVLGMAFTDERDAPSFCSLVNGDGEVTDFLRLPYFLKRRNAWREEERERKAKDI
ESLKKFLLSKKPHVVAIGGENRDALMVVEDIKRIVNELEQEHQMSPIGVHLVDNELALLY
MNSKKSENEFRDYPPLLRQAVSLARRVQDPLVEFAQVCSSDDDIICLKLHPLQEQVIKEE
LLGALYCEFINRVNEVGVDVNRAITHPHTQALVQYVCGLGPRKGSHLQKILKQNNTRLEN
RTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDA
LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCR
YKDLRIPCRAPNSEEIFNMLTKETPETFYIGKLITCNVTGIAHRRPQGESYDQAIRNDET
GLWQCPFCQQDNFPELSEVWNHFDSGACPGQAIGVKTRLDNNVAGFIPTKFLSDKNVKHP
EERVKIGMTVHCRMMKIDIEKFSVDLTCRSSDLMDKNNEWKLPKDTYYDFDSEAGDQKVA
DDAKKKQQRTTYIKRVIVHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGANHLTVTWKV
SDGIYQHIDVREEGKENAFSLGQSLLINNEEFEDLDEITARFVQPMASFARDLIYHKYYH
DCNGGDRKKMEELLTKSKREKPSFIPYYVAASKELPGKFLLGYQPRAKPRVEFVTVTPEG
YRYRGQVFSSVNGLFRWFKDHFQDPVPGITPSSTSRSSRTPASMDATPANINLADLTRAV
NALPQNMTTQMFNAIAAVTGQGQNPNATPAQWGSSQYGYGGGSAYHVFATPAQQPVATPL
MTPSYSYTTPSQQPITTPQYQGSSTPQTPASTRQRSQPKTSTAHTAVDWGKIAEQWLQEK
EQERKKQKGKMTPRPSPSPMIEGTPMSIAGDATPLLDEMDR
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggagagtgaagccgaggagtctgaggaagagtatgatgaagaaggt
acagtggtgccgaaaaaacccaagaaattcttggaagacgatgatgaggaagaggaagaa
gaagatgaaaatgcagatgaccaagacgagcagggaaatttgaaggacttcattaatgac
gatgtggaggatgatgaggaggaagaggaggaggaagatgctggcagtcaaggatctggt
ggttcagactccatcgcaaagaaaaggaaacgcaaaacttacgacgacaggctggaagat
gatgattttgacctcattgaggaaaacctgggtgtcaaagtcaaacggcagcagaaattc
cggcgtgtgaagaaagtatctgacgatgaagacgaggaggaggaagaaacggccaagaaa
ggacacgagaaggaggcgattgccgatgaacttttccccgagtatgaaggggaggaagga
gagcaggtggaagtacccgtggtggcgcctgaggaagaagaggaggaagaggatgaggaa
tcagatattgatgacttcattgttgatgatgacgggcaaccacttaagaagccaaaatgg
aagaggaagttccccgggtacactgacgctgctcttcaagaagcccaggagatcttcgga
gtggattttgattacgacgaatttgagaagtacaatgaatacgatgaggagatggaggag
gaatacgagtttgaagatgaggaattgggtgaaggcgaaaccagggttcgcccgaagaag
accgccaaaaaacgtgtcagcaggcgcagcatctttgagatctatgagcccagtgagctg
gagagcagtcacctcacagaccaggacaacgagatcagagtcacagacatgcccgagaga
ttccagcttcgtggcattccagtcaaaccctgtgaagacgacgaactggaggaagagtcc
gagtggatttacagaaatgccttctcaacgcccagcatttcattgcaggagagttctgaa
tacctggaacgtgggcagggtatcagcaacttcagtcgaaaaggcccggcaactatccag
aagataaaagaagctctcaattttatgaggaaccagcactttgaggtgcctttcattgcg
ttctacagaaaggagtatgtggatccagaactgaatatcaatgacctgtggaagttatgg
cagtgggatgagaagtggacacagctgaagactcgcaaagaaaacctgaaccggctattc
cagaagatgcaagcgtaccagtacgaacaaatctctgcggaccccgacaagcccctggcc
gatggcgttagagcacttgacactgcagatcttgaaagactgaaggacgtgcagtcgaac
gatgaactgcaggacgtgtacaatcacttcttgttgtattatggtcgtgatattccaaaa
atgcaaaatgcattaaaaccaagtaagaagaaatacaaaaagagtcagcaagttggagag
gatgaggaggaaggagaacgagatgaggaggttgaagacgatgaacgtcatggaccggag
ctgaagcaagcctcccgcagagacatgtacactatttgccagaacgctggtctagatggg
cttgcaaagaaatttgggctgactcctgagcagtttggtgaaaatctccgagacagttac
cagcgccatgaaaccgagcaatttcctgcggaaccactggaattggcgaaagattacgtc
tgcagccaatttccaacccctgaggttgtactggaaggctcccgatacatggtggccatg
cagattgcccgagaaccattggtcaagcaggttctaagacagacctttcaagagagagcc
aagataaacattactccctcgaagaaaggcaaaaaggacattgatgaagtgcactacgct
tattctttcaaatacgtaaagaataagcctgtcaaagaattgagagatgatcagttcttg
aagatatgccttgctgaggaagacggcttgctaagtatggagatctgtattgacatgaag
ggacttgacagttacggcaatgagcagacctattttgatgaaatcaagcaattctactac
cgtgatgaattcagtcaccaagtgcaagaatggaacaggcaacgcagcatggcaatcgag
cgggctctgaatcagttcctctacccactgatgggcaaggagctgaaaaacaagttgctc
attgagtcacgagattatatttcaaagtgttgcagtcgcaagctatacaactggttgaag
gttgcgccatatcggcctgaccagcaaaacgatgaggatgacgatgactttatggaggaa
agtcagagcaaaggtgtccgagtgttggggatggcgtttacagacgaaagggatgcgccg
tcattctgttctcttgtcaatggtgatggggaagtgacagacttccttcgactgccttat
ttcttaaagcggaggaatgcctggcgtgaggaagaacgagagaggaaggcaaaggatatt
gaaagcttgaaaaagtttcttctgagtaagaagcctcatgtggtggcgatcggtggggag
aacagggacgcacttatggttgtagaggatataaaacgaattgtcaatgaactggagcag
gagcatcaaatgtcacctattggagtgcacttggtggacaatgagctggcccttctctat
atgaatagcaaaaagtccgagaatgaatttcgggattacccaccgctgttacgtcaggca
gtgtcactggctcgcagggttcaggacccactggtcgagtttgctcaagtctgcagctct
gatgatgacattatttgtctcaaattgcaccccttgcaggaacaagttataaaagaagaa
ttactgggtgcgctttactgtgaattcattaaccgagtgaatgaagtgggtgtggatgta
aacagagcgataacacatccacacactcaagcactggttcaatatgtttgtggtctgggg
ccacgtaaaggatcgcacctgcagaagatcctcaaacagaataacactcgcttggagaat
aggacccagctcgtcaccatgtgccacatgggtccaaaggtcttcatcaattgtgcggga
tttattaaaatagatacggcgtctttaggggacagtactgattcctacattgaggtcctg
gacggatcaagagttcatcctgagacgtacgaatgggccaggaaaatggcggtggacgct
ctggaatacgatgaatcggcagaggatgccaaccccgctggggcgctggaagaaattctg
gaaaaccctgagcgactaaaagatctcgaccttgacgcatttgcggaagagctggaaagg
cagggctatggtaacaaaggcatcacactgtatgacattcgagccgagctgagctgcaga
tacaaggatttgcgtataccttgccgtgcaccaaactctgaggagatctttaacatgctc
acaaaggaaactccagagacattctacattggtaaattaataacgtgcaacgtgacagga
attgctcacaggaggcctcagggtgagagttatgatcaggccatcaggaatgatgaaacc
ggcctttggcagtgtcctttctgccagcaagacaactttccggagcttagcgaggtgtgg
aatcattttgacagcggtgcgtgtcctggtcaggctatcggggtgaaaaccaggctggac
aacaacgtcgcaggttttatcccgacaaaattcctgagtgacaagaatgtgaaacacccc
gaagaaagggtcaagattggcatgactgtacattgccgaatgatgaagatcgacattgag
aagttcagtgtggacctcacgtgccgatcgtcggatctgatggataagaacaacgagtgg
aagttgcccaaggacacctattacgattttgactctgaagcgggagatcaaaaggtcgca
gacgacgcaaagaaaaagcagcagcgcacaacctacatcaagcgggtaattgtgcacccg
tcattccacaatatcaacttcaagcaggcggagaagatgatggagaccatggatcagggc
gacgtcatcatcaggcccagcagcaaaggggcaaaccacctgaccgtcacctggaaagtg
agtgacggcatctaccaacatattgacgtgagagaagaaggcaaggaaaatgccttcagt
ttgggacagtctctgttgattaacaacgaggaatttgaagacctcgatgaaattacggct
cgttttgtgcagccaatggcatcttttgctcgtgacttgatctatcataaatattaccat
gattgcaatggtggagaccgcaagaaaatggaagagctcctcacaaaatccaaaagggaa
aagccttcttttattccctattatgtggccgcatcaaaggaactgccgggaaagtttttg
ttaggctaccaaccccgagccaaaccaagggtggagtttgttactgtcaccccagaaggg
tatcggtacagagggcaggtgttctcatctgtgaatggtttgttcaggtggtttaaagac
catttccaggacccagtgccaggtataacaccttcaagtacaagcagatctagtagaact
cctgcctcaatggatgcaacaccagctaatattaatttggcagatcttacccgagcagtg
aatgctctcccacagaacatgaccacgcagatgtttaacgccattgccgccgttaccggg
cagggacagaatccaaacgccacgccggcgcagtggggatccagccagtacggctacgga
ggaggcagtgcctaccacgtctttgccactcctgcacagcagcccgtggccacgccactg
atgacgccgagttactcgtacaccacgcccagccagcagcccatcaccacgccccagtac
cagggcagcagcacgccccagacccccgcctcaacgcgacaacgctcgcagcccaagacc
tccactgcacacactgcagttgactggggcaagatcgctgagcagtggctgcaggagaag
gagcaggagcggaaaaagcagaaaggcaagatgacacccagaccgtcgcccagccccatg
atcgagggcaccccgatgtccatcgctggcgatgccacacctttactggacgaaatggat
cgatag
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integrated database retrieval system
